These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15804#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 565 fasta sequence [GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGTCTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT-AATGGCGACAGCCGGGAA-GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA-GGCCGGGAAGCCGCTGTCGATCGAGGA-GGT-GGAGGTTGCGCCGCCGCAGGCCAT-G-GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT-GGGCCATGAAGCTGGA-GGCATTGTGG-AGAGT-G-TGGGA-G-A--GGGTGTGA-CCGAAC-TCGCGCCGGGCGACCA-TGTCCTCCCGGTGTTCACCGGCGAGTGCAA-GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC] [+] EMBL AU030792 [GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGTCTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCGGTGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA GCAAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAANGGGCAAACACCTGTTTTCCCTAGGATCTTNGGGCCATGAAGCTGGA NGCATTGTGGAAGAGT GTTGGGA A A AGGTTTGA CCGAAC TCGCGCCGGGCGACCA TG ] [+] EMBL CF321948 [ ATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGTCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF321150 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTCGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCANGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC] [+] EMBL CF314065 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGTGGGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA GAA GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF317025 [ TCCAAGCAACGAACTGCGAGTGATTCAAGGAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGAGGGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF320125 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF317154 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTTGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF322334 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF319922 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTC ATCGAGGA GT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCAT ] [+] EMBL CF314944 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGTGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GTG GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA N AAGGGGTGTGA CCGAAC TCGCGCCGGGCGACCATTGTCCTCCCGGTGTTCACCGGCGAGTGCAAGGGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC] [+] EMBL CF319343 [ TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA ] [+] EMBL CF309625 [ ccAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGTGGGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGTCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA GAA GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF307257 [ GAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL CF318145 [ AACTGCGAGCGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGCCGATCGAGGA GGT GGAGGTTGCGCCGCCGCACGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGACCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTCCTCCCTATGATCTT GGGCCATGAAACTGGA GGCATTGTGG AAAGT G TGGGAc ] [+] EMBL OSR15721A [ TGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCNGGAAGCCGNTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA NCANT G GAGGTCCGCGTCAAGATCCTCTACACCGNCCTNTNNCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGNTGNA GGCATTNTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGncn ] [+] EMBL AU092102 [ GCGAGTNATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTTCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCATT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTTA CCGAAC TCGCGCCGGGCG ] [+] EMBL CF306421 [ gGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGANG A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL AU062444 [ GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGG CATNG GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACAACTGTTTTNCCTAGGATCTTNGGGCCATGAAGCTGGA GGCATTTTGG AGAGT T TTGGA A A AGGTttt ] [+] EMBL AU062409 [ GCGAGTTATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTNGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTCCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCAAT GNGAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAANACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT T TCGGA G A AGGTGTTA CCGAAC TCGNGCCGGGCGACCA TGTCCTTCCGGTGTTCACCGGCGAGTTCA ] [+] EMBL AU062619 [ GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATTAAATGGCGNCACCGGGGAAGGGTGATCAAGTNAAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCG AG CAT G GAGGTCCGCGTCAAGATCCTCTACACCG CCTCTGCCACACC NCGTCTACTTCTGGGAGG CAAGGGGCAAACAACTGTTTTNCCTAGGATCTT GGG CATGAAGTTGagnat ] [+] EMBL AU062622 [ GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCGGNGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA GNCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTC ] [+] EMBL CA755578 [ GTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGTGG TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCna ] [+] EMBL CF306546 [ ATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA ] [+] EMBL OSS2409A [ AAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGCCAAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGAGGGCATTGTGG AGAGT G TGGGA G A GGGTGTGACCCGAACTTCGCGNCGGGCG ] consensusID : consensus_15804#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 181 fasta sequence [CTTACTCACTTCCTCCTCACTTCTAGTAAAGGGAGGAGCAGGTACACGGGGGTTGAGATCTGAGGAGGGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACAGCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCGATCGAGGA] [+] EMBL CF319445 [CTTACTCACTTCCTCCTCACTTCTAGTAAAGGGAGGAGCAGGTACACGGGGGTTGAGATCTGAGGAGGGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACAGCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCGATCGAGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15804#0 GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGT 60 consensus_15804#1 ---------------------------------------------------CTTACTCAC 9 * *** consensus_15804#0 CTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAG 120 consensus_15804#1 TTCCTCCTCA---CTTCTAGTAAAGGG--AGGAGCAGGTACACGGGGGTTGAGATCTGAG 64 ***** ** * * ** ** * *** * * * * ***** consensus_15804#0 CTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATTAATGGCGACA 180 consensus_15804#1 -----GAG------GGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACA 113 ** **** * * ********************************* consensus_15804#0 GCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGGGAAGCCGCTGTCG 240 consensus_15804#1 GCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCG 173 ***************************************** ****************** consensus_15804#0 ATCGAGGAGGTGGAGGTTGCGCCGCCGCAGGCCATGGAGGTCCGCGTCAAGATCCTCTAC 300 consensus_15804#1 ATCGAGGA---------------------------------------------------- 181 ******** consensus_15804#0 ACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTC 360 consensus_15804#1 ------------------------------------------------------------ consensus_15804#0 CCTAGGATCTTGGGCCATGAAGCTGGAGGCATTGTGGAGAGTGTGGGAGAGGGTGTGACC 420 consensus_15804#1 ------------------------------------------------------------ consensus_15804#0 GAACTCGCGCCGGGCGACCATGTCCTCCCGGTGTTCACCGGCGAGTGCAAGGAGTGTGAT 480 consensus_15804#1 ------------------------------------------------------------ consensus_15804#0 CACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGC 540 consensus_15804#1 ------------------------------------------------------------ consensus_15804#0 GTCATGATCGGCGACGGCAAGTCCC 565 consensus_15804#1 ------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||