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Oryza sativa
cluster # 15804 cluster # 15804       Sequences # 25       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15804#0 length = 565 sequences # 24  
consensus_15804#1 length = 181 sequences # 1  

consensusID : consensus_15804#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 565
fasta sequence
                              [GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGTCTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT-AATGGCGACAGCCGGGAA-GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA-GGCCGGGAAGCCGCTGTCGATCGAGGA-GGT-GGAGGTTGCGCCGCCGCAGGCCAT-G-GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT-GGGCCATGAAGCTGGA-GGCATTGTGG-AGAGT-G-TGGGA-G-A--GGGTGTGA-CCGAAC-TCGCGCCGGGCGACCA-TGTCCTCCCGGTGTTCACCGGCGAGTGCAA-GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC]

[+] EMBL AU030792             [GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGTCTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCGGTGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA GCAAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAANGGGCAAACACCTGTTTTCCCTAGGATCTTNGGGCCATGAAGCTGGA NGCATTGTGGAAGAGT GTTGGGA A A  AGGTTTGA CCGAAC TCGCGCCGGGCGACCA TG                                                                                                                            ]
[+] EMBL CF321948             [                                                                        ATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGTCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF321150             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTCGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCANGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC]
[+] EMBL CF314065             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGTGGGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA GAA  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF317025             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGGAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGAGGGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF320125             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF317154             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA  GT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTTGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF322334             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF319922             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTC ATCGAGGA  GT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G AG GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCAT                    ]
[+] EMBL CF314944             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGTGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GTG GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA N AAGGGGTGTGA CCGAAC TCGCGCCGGGCGACCATTGTCCTCCCGGTGTTCACCGGCGAGTGCAAGGGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAAGTCCC]
[+] EMBL CF319343             [                                                                          TCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF309625             [                                                                            ccAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGTGGGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGTCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA GAA  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF307257             [                                                                                    GAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL CF318145             [                                                                                     AACTGCGAGCGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGCCGATCGAGGA GGT GGAGGTTGCGCCGCCGCACGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGACCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTCCTCCCTATGATCTT GGGCCATGAAACTGGA GGCATTGTGG AAAGT G TGGGAc                                                                                                                                                                    ]
[+] EMBL OSR15721A            [                                                                                        TGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCNGGAAGCCGNTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA NCANT G GAGGTCCGCGTCAAGATCCTCTACACCGNCCTNTNNCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGNTGNA GGCATTNTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGncn                                                                                                                                       ]
[+] EMBL AU092102             [                                                                                         GCGAGTNATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTTCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCATT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTTA CCGAAC TCGCGCCGGGCG                                                                                                                                   ]
[+] EMBL CF306421             [                                                                                        gGCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGANG A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL AU062444             [                                                                                         GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGG CATNG GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACAACTGTTTTNCCTAGGATCTTNGGGCCATGAAGCTGGA GGCATTTTGG AGAGT T TTGGA A A  AGGTttt                                                                                                                                                        ]
[+] EMBL AU062409             [                                                                                         GCGAGTTATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTNGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTCCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCAAT GNGAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAANACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT T TCGGA G A  AGGTGTTA CCGAAC TCGNGCCGGGCGACCA TGTCCTTCCGGTGTTCACCGGCGAGTTCA                                                                                                 ]
[+] EMBL AU062619             [                                                                                         GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATTAAATGGCGNCACCGGGGAAGGGTGATCAAGTNAAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCG AG  CAT G GAGGTCCGCGTCAAGATCCTCTACACCG CCTCTGCCACACC NCGTCTACTTCTGGGAGG CAAGGGGCAAACAACTGTTTTNCCTAGGATCTT GGG CATGAAGTTGagnat                                                                                                                                                                                           ]
[+] EMBL AU062622             [                                                                                         GCGAGTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCGGNGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCA GNCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTC                                                                                                              ]
[+] EMBL CA755578             [                                                                                             GTGATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGTGG TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCna     ]
[+] EMBL CF306546             [                                                                                                ATTCAAGAAAAAAGAAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAGCCGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGGCCAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGA GGCATTGTGG AGAGT G TGGGA G A  GGGTGTGA CCGAAC TCGCGCCGGGCGACCA TGTCCTCCCGGTGTTCACCGGCGAGTGCAA GGAGTGTGATCACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGCGTCATGATCGGCGACGGCAA     ]
[+] EMBL OSS2409A             [                                                                                                              AAAACCTGAGCTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATT AATGGCGACAG CGGGAA GGTGATCAAGTGCAAAGCGGCGGTGGCATGGGA GGCCGGGAAGCCGCTGTCGATCGAGGA GGT GGAGGTTGCGCCGCCGCAGCCAAT G GAGGTCCGCGTCAAGATCCTCTACACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTCCCTAGGATCTT GGGCCATGAAGCTGGAGGGCATTGTGG AGAGT G TGGGA G A  GGGTGTGACCCGAACTTCGCGNCGGGCG                                                                                                                                   ]


>consensus_15804#0 GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGT CTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAG CTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATTAATGGCGACA GCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGGGAAGCCGCTGTCG ATCGAGGAGGTGGAGGTTGCGCCGCCGCAGGCCATGGAGGTCCGCGTCAAGATCCTCTAC ACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTC CCTAGGATCTTGGGCCATGAAGCTGGAGGCATTGTGGAGAGTGTGGGAGAGGGTGTGACC GAACTCGCGCCGGGCGACCATGTCCTCCCGGTGTTCACCGGCGAGTGCAAGGAGTGTGAT CACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGC GTCATGATCGGCGACGGCAAGTCCC



consensusID : consensus_15804#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 181
fasta sequence
                              [CTTACTCACTTCCTCCTCACTTCTAGTAAAGGGAGGAGCAGGTACACGGGGGTTGAGATCTGAGGAGGGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACAGCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCGATCGAGGA]

[+] EMBL CF319445             [CTTACTCACTTCCTCCTCACTTCTAGTAAAGGGAGGAGCAGGTACACGGGGGTTGAGATCTGAGGAGGGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACAGCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCGATCGAGGA]


>consensus_15804#1 CTTACTCACTTCCTCCTCACTTCTAGTAAAGGGAGGAGCAGGTACACGGGGGTTGAGATC TGAGGAGGGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACAGCCGGGA AGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCGATCGAGG A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15804#0      GCCCGCGAGACTCCTACCACTCTCTGATCCCTATATATACACCCCCTCCTCCCCTCTCGT 60
consensus_15804#1      ---------------------------------------------------CTTACTCAC 9
                                                                          *   ***  

consensus_15804#0      CTCCTCACCAGAATTCCAAGCAACGAACTGCGAGTGATTCAAGAAAAAAGAAAACCTGAG 120
consensus_15804#1      TTCCTCCTCA---CTTCTAGTAAAGGG--AGGAGCAGGTACACGGGGGTTGAGATCTGAG 64
                        *****  **    * * ** ** *      ***    *  *         * * *****

consensus_15804#0      CTTTCGATCTCTTCGGAGTGGTTTCTTGTTCTTTGAAAAAGAGGGGGATTAATGGCGACA 180
consensus_15804#1      -----GAG------GGAGGAGAGGATGGTTCTTTGAAAAAGAGGGGGATTAATGGCGACA 113
                            **       ****  *    * *********************************

consensus_15804#0      GCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGGGAAGCCGCTGTCG 240
consensus_15804#1      GCCGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGATGCCGGGAAGCCGCTGTCG 173
                       ***************************************** ******************

consensus_15804#0      ATCGAGGAGGTGGAGGTTGCGCCGCCGCAGGCCATGGAGGTCCGCGTCAAGATCCTCTAC 300
consensus_15804#1      ATCGAGGA---------------------------------------------------- 181
                       ********                                                    

consensus_15804#0      ACCGCCCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGGCAAACACCTGTTTTC 360
consensus_15804#1      ------------------------------------------------------------
                                                                                   

consensus_15804#0      CCTAGGATCTTGGGCCATGAAGCTGGAGGCATTGTGGAGAGTGTGGGAGAGGGTGTGACC 420
consensus_15804#1      ------------------------------------------------------------
                                                                                   

consensus_15804#0      GAACTCGCGCCGGGCGACCATGTCCTCCCGGTGTTCACCGGCGAGTGCAAGGAGTGTGAT 480
consensus_15804#1      ------------------------------------------------------------
                                                                                   

consensus_15804#0      CACTGCAAATCGGAGGAGAGCAACATGTGTGACCTCCTCAGGATCAACGTCGACCGCGGC 540
consensus_15804#1      ------------------------------------------------------------
                                                                                   

consensus_15804#0      GTCATGATCGGCGACGGCAAGTCCC 565
consensus_15804#1      -------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)