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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15830#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1316 fasta sequence
[GAGAAACCCAAACTAGGGTTTCTGGTCGGATAGTTCAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA------TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA-TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT-CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG-AAGCAGCTGCAGCTGCAGCTA-TGAAAGTGGCTGATGCGGAGGCCAAATCACA-CC-TTGC-GAATGAGCACATGACGGAGGC-TGAAAGGATCTTCAAGC-TTGCTGA-GGAGACCGA-GTC--TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG-CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAGTGTGATCAAATAAAAAATGGCTTGATAAAAATAGCAACATAAGTGGTTAAGTGGGAGCAAATGAATGTTACATGCATTTAGAGAGCACATAAAACAAAGCGTTTTACTTTGGTTATCACAAAAAAAAAAAGG]
[+] EMBL OSA495797 [GAGAAACCCAAACTAGGGTTTCTGGTCGGATAGTTCAGACGCCGGAGAGTGCAGGAGGCGGGGGGGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGATAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTC TCTTGCGATTGCAAGTGTGATCAAAGACAAAA ]
[+] EMBL CF310103 [ AAACCC ACCTAGGGTTTCTGGTCGGATAGTTCAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTG ]
[+] EMBL CF282435 [ ACCCAAACTAGGGTTTCTGGTCGGATAGTTCAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAAGTACAGTTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGG ]
[+] EMBL CB682437 [ GATAGTTCAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCGAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAATGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTATGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAA ]
[+] EMBL CF319371 [ CAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAG ]
[+] EMBL CF322924 [ ACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACTTCGTAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATTTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTC ]
[+] EMBL CB657350 [ GAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAG ]
[+] EMBL CA755152 [ GGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAAT ]
[+] EMBL OSC107681 [ GGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCANCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTTAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTG AATTGGGGATCC AATGGTTCGGATGTTG TG AATTTGCCA TACATAG GCAAAGGa ]
[+] EMBL AA752003 [ acgagCTCGTGC CGAA TTCG GCACGAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCNAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCNAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATANAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAANA TTGCTTACTGCAAAATTAAGGAGGCTTATNNCANCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACANAATCTTATGCANCCCAAGTTTCGCAAGCAAATAANTCT CCAAGTCCAAANAAAGATCCAGCCCAGC ]
[-] EMBL CB657351 [ AGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCA ]
[-] EMBL CB631360 [ AGATTCCAAA TTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGA TTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCGGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCT ]
[-] EMBL CB682438 [ GGCACGAGGTGCAAGCGAATTTTAG AGATTTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAGTGTGATCATGTAGTTTCTGGCTTGATAAAAATAGCAACATAAGTGGTTAAGTGGGAGCAAATGAATGTTACATGCATTTAGAGAGCACATAAAACAAAGCGTTTTACTTTGGTTATCACAAAAAAAAAAAGG]
[+] EMBL OS1318A [ cgCTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTATTGAAAGTGGCTGATGCGGAGGCCAAATCACA CCTTTGCGGAATGAGCACATGACGGAGGCTTGAAAGGATCTTCAAGCTTTGCTGAGGGAGACCGAGGTCTTTTTGGTTACAaat ]
[-] EMBL CF327668 [ TGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCAaaaaa ]
[+] EMBL C98241 [ AAGGA GCTTATAGCAGCGAAAAAGATTGAAAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAATAAGTCTCCCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAGAAAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TC NNTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAGTGTGATCATGTAAAAA ]
[-] EMBL CF319372 [ GTTTCGCAAGCAAATAAGTCT CCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCAGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAGTGTGATCAAAAAAA ]
[+] EMBL BM419726 [ AAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAG AAGCAGCTGCGGCTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACACCC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAaaaaaaa ]
[-] EMBL CF310456 [ CTGCAGCTA TGAAAGTGGCTGATGCGGAGGCCAAATCACA CC TTGC GAATGAGCACATGACGGAGGC TGAAAGGATCTTCAAGC TTGCTGA GGAGACCGA GTC TCTCGTTACACTCGCAACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTaaaaaaaa ]
[-] EMBL D42645 [ ATGAC GAGGC TGAAAGGATCTTCAAGC TTGCTGA GAGA CGA GTC TCT G TACACTCGC ACAGAGATCTATG ACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAG CAATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGA ]
[+] EMBL AU102129 [ TTAACAATAATGCAAGTGGCGCAAAGTCNATTTTGAATTCCAATCTGTTAGCGGCAACGGCAGCGGCACTGGTTATACTGTACTTGCATAGGTTGGTTTGCCCTGTCNTCTTTGGCATGTTGTTCCTCCGATGTGTAANTTNAAACATGTTGTTAACTTNTTATGTACTTGGGTNGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGAaaaaaaa ]
consensusID : consensus_15830#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 568 fasta sequence
[GGACTGAAGGAGTAGAAAAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCTCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAAGTACAGTTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGATTGCTTACTGCAAAATTAAGGAGGCTT]
[+] EMBL CF310455 [GGACTGAAGGAGTAGAAAAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCTCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTCAGGATGTGAAGATTCCAAAGTACAGTTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGCGAATTTTAGAAGATTGCTTACTGCAAAATTAAGGAGGCTT]
[+] EMBL CF327667 [ cAGACGCCGGAGAGTGCAGGAGGCGGGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTCGGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCATCCAAAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAAGGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTCTGAGGATGTGAAGATTCCAAAGTACAGTTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCCAAATGGTTCGGATGTTGATGCAATTTGC CTACATAGAGCAAAGGCACGAGGTGCA ]
consensusID : consensus_15830#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 516 fasta sequence
[AGTCCAAGAAGGATCCCACCCAACCATCTGAAGCATCCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAGAACACTGCGCTGCAGCTATGAAAGTGGCTGATCCGGAGGCCAAATCACNCCTTGCGAATGAGCACATGACGGAGGCTGAAAGGATCTTCAAGCTTGCTGAGGAGACCGAGTCTCTCGTTACACTCGCNACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAGCNATTTTGAATTCCCATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTC-AAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCCAAAAAAAAAA]
[+] EMBL BM419876 [AGTCCAAGAAGGATCCCACCCAACCATCTGAAGCATCCAGAATTTAGGTTCATTTGCTGGTACGAGTCCTGCCCTAGAACACTGCGCTGCAGCTATGAAAGTGGCTGATCCGGAGGCCAAATCACNCCTTGCGAATGAGCACATGACGGAGGCTGAAAGGATCTTCAAGCTTGCTGAGGAGACCGAGTCTCTCGTTACACTCGCNACAGAGATCTATGAACGATGTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAGCNATTTTGAATTCCCATCTGTTAGCGGCAACGGCAGCGGCACTGGTTCTACTGTACTTGCATAGGTTGGTTTGCCCTGTCATCTTTGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTC AAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCCAAAAAAAAAA]
[+] EMBL CB096679 [ TAAAACATGTTGTTAACTTGTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCTCATCCTTAATTATAATTATATAAATGTGCATCTCATCTTGCGATTGCAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15830#0 GAGAAACCCAAACTAGGGTTTCTGGTCGGATAGTTCAGACGCCGGAGAGTGCAGGAGGCG 60
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 GGGGAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCCCGAAGCAGAAGTGGACCTC 120
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 GGAGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCAC 180
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 CATCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACCTCAA 240
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 GGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGGACTGGGTTCAAGGGATAAATTAAA 300
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 GGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCGCTTCT 360
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 CGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGAGAAAAGCTC 420
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 TCAGGATGTGAAGATTCCAAATTCCATGGTAATAGAAGCTCTTTGTGAAATTGGGGATCC 480
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 AAATGGTTCGGATGTTGATGCAATTTGCCACTACATAGAGCAAAGGCACGAGGTGCAAGC 540
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 GAATTTTAGAAGATTGCTTACTGCAAAATTAAGGAGGCTTATAGCAGCGAAAAAGATTGA 600
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 AAAGATTGACAGGTCCTATAGGATCACAGAATCTTATGCAGCCAAAGTTTCGCAAGCAAA 660
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 TAAGTCTCCAAGTCCAAAGAAGGATCCAGCCAAGCCACTGAAGGCATCGCAGAATTTAGG 720
consensus_15830#2 ----------AGTCCAA-GAAGGATCCCACCCAACCATCTGAAGCATC-CAGAATTTAGG 48
consensus_15830#1 -------------GGACTGAAGGAGTAGAAAAGACG--CCGGAGAGTGCAGGAGGCGGGG 45
* ****** * * * ** **
consensus_15830#0 TTCATTTGCTGGTACGAGTCCTGCCCTAGAAGCAGCTGCAGCTGCAGCTATGAAAGT-GG 779
consensus_15830#2 TTCATTTGCTGGTACGAGTCCTGCCCTAGAAC--ACTGC-GCTGCAGCTATGAAAGT-GG 104
consensus_15830#1 GAGGCTTGTGGGGAGGAGGCGCGCGGAGATGGGCGCCTC-GAAGCAGAAGTGGACCTCGG 104
*** ** * *** * ** * * * **** ** * * **
consensus_15830#0 CTGATGCGGAGGCCAAATCACACCTTGCGAATGAGCACATGACGGAGGCTGAAAGGATCT 839
consensus_15830#2 CTGATCCGGAGGCCAAATCACNCCTTGCGAATGAGCACATGACGGAGGCTGAAAGGATCT 164
consensus_15830#1 AGGAGGAGGAGGCGCTGCGGCGCGGCGTGCTCAAGCATGGCCCCGGCAAGTGGCGCACCA 164
** ****** * * * * **** * * * * *
consensus_15830#0 TCAAGCTTGCTGAGGAGACCGAGTCTCTCGTTACACTCGCAACAGAGATCTATGAACGAT 899
consensus_15830#2 TCAAGCTTGCTGAGGAGACCGAGTCTCTCGTTACACTCGCNACAGAGATCTATGAACGAT 224
consensus_15830#1 TCCAGAAGGATCCGGAGTTCAGCCCCGTCCTCTCCTCCCGCTCGAACATCGACC--TCAA 222
** ** * * **** * * ** * * * * * *** * *
consensus_15830#0 GTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAGCAATTTTGAATTCCAAT 959
consensus_15830#2 GTTCAAGAGGAGAGATATTAACAATAATGCAAGTGGCGCAAAGCNATTTTGAATTCCCAT 284
consensus_15830#1 GGACAAATGGAGGAATTTGAGTTTTAGTGCAAGTGG-----ACTGGGTTCAAGGGATAAA 277
* *** **** ** * * ** ********* * ** * *
consensus_15830#0 CTGTTAGCGGCAACGGCAGCGGCACTGGT-TCTACTGTACTTGCATAGGTT--GGTTTGC 1016
consensus_15830#2 CTGTTAGCGGCAACGGCAGCGGCACTGGT-TCTACTGTACTTGCATAGGTT--GGTTTGC 341
consensus_15830#1 TTAAAGGTTCCAAGGATAAAAGGGCCTTCATCTTCCACATCTCCAAGCTCTCAGACTCCG 337
* * *** * * * * *** * * * ** * * *
consensus_15830#0 CCTGTCATCTT--TGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTT 1074
consensus_15830#2 CCTGTCATCTT--TGGCATGTTGTTCCTCCGATGTGTAACTTAAAACATGTTGTTAACTT 399
consensus_15830#1 CTTCTCGTCCTACCCCCAAATAAAGTTGCTGAGGCTTCACCATCCGCAGATCCTGA---- 393
* * ** ** * ** * * ** * * ** ** * * *
consensus_15830#0 GTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAAACGTCAGGTGTTCCGCT 1134
consensus_15830#2 GTTATGTACTTGGGTCGAGCCGGCTAAGACGTTTACCTCAAAA-CGTCAGGTGTTCCGCT 458
consensus_15830#1 GAAAAGCTCTCAGGATGTGAAGATTCCAAAGTACAGTTCCATGGTAATAGAAGCTCTTTG 453
* * * ** ** * * * * * ** * ** * ** * **
consensus_15830#0 CATCCTTAATTAT---AATTATATAAATGTGCATCTCATCTTGCGATTGCAAGTGTGATC 1191
consensus_15830#2 CATCCTTAATTAT---AATTATATAAATGTGCATCTCATCTTGCGATTGC---------C 506
consensus_15830#1 TGAAATTGGGGATCCAAATGGTTCGGATGTTGATG-CAATTTGCCACTACATAGA---GC 509
** ** *** * **** ** ** **** * * * *
consensus_15830#0 AAATAAAAAATGGCTTGATAAAAATAGCAACATAAGTGGTTAAGTGGGAGCAAATGAATG 1251
consensus_15830#2 AAAAAAAAAA-------------------------------------------------- 516
consensus_15830#1 AAAGGCACGAGGTGCAAGCGAATTTTAGAAGATTGCTTACTGCAAAATTAAGGAGGCTT- 568
*** * *
consensus_15830#0 TTACATGCATTTAGAGAGCACATAAAACAAAGCGTTTTACTTTGGTTATCACAAAAAAAA 1311
consensus_15830#2 ------------------------------------------------------------
consensus_15830#1 ------------------------------------------------------------
consensus_15830#0 AAAGG 1316
consensus_15830#2 -----
consensus_15830#1 -----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||