|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15844#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 913 fasta sequence
[GCTGAAGCTGAAGAGCTGAACGCGGTGAGGCGGTCGTAGGCCTTCTTCCCCTCTCCGTCTCGTGTCCCACGCACGCACACC-TTCCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGCAGCCGCCCCGCACCCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGG--TGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGCGATCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG--ATATATAGAATAATTACATGTGTATCTTGCTTATTGCCCAAAATAGAGGCATCAAATGCAGTCAAAACTTTGGTTTAAAAAAAA]
[+] EMBL CF332733 [GCTGAAGCTGAAGAGCTGAACGCGGTGAGGCGGTCGTAGGCCTTCTTCCCCTCTCCGTCTCGTGTCCCACGCACGCACACC TTTCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGCAGCCGCCCCGCACCCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGA ]
[+] EMBL OS1453A [ TCCCCTCTCCGTCTCGTGTCCCACGCACGCACACCTTTCCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGCAGCCGCCCCGCACCCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTNCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGNGGGGGCTGNGGGCACGTTCTATGNCGGAGAGANATACCAATTGCAGGTGGACTTNCCTGAGCATTA CCCATGGAGG TTCCCAGGTGATATTTCTTTAT ]
[+] EMBL AK103809 [ TTCCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGCAGCCGCCCCGCACCCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGG TGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGCGATCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG ATATATAGAATAATTACATGTGTATCTTG ]
[+] EMBL OSS1340A [ CATCCCTAGCAGCCGCCCCGCACCCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATC ]
[+] EMBL AU097030 [ TCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGG TGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGCGATCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG ATATATAGAATAATTACATGTGTATCTTGCTTATTGCCCAAAATAGAGGCATCAAATGCAGTCAAAACTTTGGTTTAAAAAAAA]
[+] EMBL OSC4261 [ AGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGTNCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGG ACTGCCGCAATGGGAGGTCGCCG AGGAG CCAGGGTTGGTGGTTTCATGATGACAAAGTGTGATTGGTTCC ACTTCCGGTTGGCTTNTCCTAAG AACCC TTTACCCG CAACCTACC TTA ATGGggg ]
[+] EMBL AU165784 [ GCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGG TGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGCGATCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG ATATATAGAATAATTACATGTGTAaaaaa ]
[-] EMBL CF332734 [ GGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGG TGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGCGGTCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG ATATATAGAATAATTACATGTGTATCTTGCTTATTGCCCAAAATAGAGGCATCAAATGCAGTCAAAACTTTGGTTTAAAAAA ]
[+] EMBL AA750942 [ CCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTAAGTGATCTATTTGACCG AAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGGATATATATAGAATAATTA ]
consensusID : consensus_15844#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 827 fasta sequence
[CCTCCCCTCTTCTTCTCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC-TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT-CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC-TACGCCGGCG-AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT-GGAGGCGCCTCAGG-TCA-TTTTTC-TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC-GGGCACATC-TGTTTAGATATACTGTATGA-TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA-TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA-TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGAATAAGCAAGTGTACCATGCTTGATTCTNCTGAAAAAA]
[+] EMBL AK071648 [CCTCCCCTCTTCTTCTCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATAACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGC AAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGAATAAGCAAGTGTACCATGC ]
[+] EMBL C98983 [ TCCTTCGACTTTNTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCGAAGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTT TNAACCCGGCGCCGATGCATNCACACATTTACAGCAACGGGGCACATC TNTTTAGATATACTG ]
[+] EMBL AU078220 [ TCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTA ]
[+] EMBL AU064453 [ TCCTTCGACTTTGTTCGACTCCNCTNCTTCCCGGNAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATNGCTTNCAATCGGCTGCAGAAGGAGCNCGCCGAGTGGCAGGTCAGCNCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTTATCGAGGTNACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGAAATANCAGCTGCAGGTCGACTT CCTGAGCATTATCCCAT GGAGGNGCCTt ]
[+] EMBL AU064988 [ TCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGTTCTTACGGCGGCG AGACAT ]
[+] EMBL AU065068 [ TCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGNTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATNCACACATTTACAGCAAC GGGCACATC TTTTTAGATATACTGTATGA TTCTTTGTCAACTGCAATGACTTTCAGTTTCGNCTTCATCAGCAT ]
[+] EMBL AU064193 [ TCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGNAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGNCTTTCCTGAGCATTATCCCATNGGAGGCGCCTCAGG NCATTTTTTCTTAAACCNGGCGNCGATGCATCCACACATTTACAGCAACGGGGCACATCTTGTTTAGGTATACTGTATG ]
[+] EMBL AU064919 [ TCCTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGNTC TACGNCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTN TAAACCC GCGCCGATGNATCCACACANTTNCAAGAAC GGGCAAAT TTTTTAGGTATACTGTATGATTTTTTGGTAAC ]
[+] EMBL OSC28541 [ GAGGAGAGGAGAGGACTCATCCATCATCATCAATCAACGNCATGACGAGCTCCTCATCTCC TTNCCGAAAGGCGCTGAGCAAGATCGNTTGCAATCGGCTGCAGAAGGNGCTCGNCGAGTGGCAGNTCAGCCCTCCCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTTGACTTCCCTGAGCATTATCCCAT GGAGGCGNCTCAGGTTCA TT ]
[+] EMBL AU078221 [ CAACGCCATGACGAGCTCCTCATCTCCTTTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCT CCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGA ]
[+] EMBL AU094911 [ CAACGCCATGACGAGCTCCTCATCTCC TTCCCGAAAGGCGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCCCT CCTCCGGGTT CAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGA ]
[+] EMBL AU094326 [ AGGTCAGCCCTCCTTCCGGGTN CAAG ACAGGGTCTCCGATACCNTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGNCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGA ]
[+] EMBL AU094220 [ ccttCTTCGGGTTCCAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCACCGGAGCGGCGGGCACGCTN TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTCCCTGAGCATTATCCCAT GGAGGCGCCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGA ]
[+] EMBL OSEN44835 [ GTAATCGAGGTCACCGGAGCGGCGGGCACGCTC TACGCCGGCG AGACATACCAGCTGCAGGTCGACTTTCCTGAGCATTATCCCAT GGAGGCGGCTCAGG TCA TTTTTC TCAACCCGGCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAATTTGCCGCAATGGGAGGTCGCCCGATGAGACAAGATGGTGGTTCCATTGTTGACAAAGTGTAAGGGGACTTGGTTttgaac ]
[+] EMBL AU183034 [ GCGCCGATGCATCCACACATTTACAGCAAC GGGCACATC TGTTTAGATATACTGTATGA TTCTTGGTCACCTGCAATGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGA ]
[+] EMBL AU069908 [ GCAACGCCCTCAAGACAATGACCGCTATGTTAGGAA TTGCCGCAATGGGAGGTCGCCGAA GAGACANGATGGTGGTTCCA TGATGACAAAGTGTAAGAGGAACTAGTTGGCACTTTTGCCATTCAGTAATCGTAATACCTTGAAATCTCTTGCAAGGGGAAAATGAGATGAATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGTTTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATATTACCATAAATGATTATACAGAATAAGCAAGTGTACCATGCTTGATTCTNCTGAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15844#0 GCTGAAGCTGAAGAGCTGAACGCGGTGAGGCGGTCGTAGGCCTTCTTCCCCTCTCCGTCT 60
consensus_15844#1 --------------------------------------------CCTCCCCTCTTCTTCT 16
* ******** * ***
consensus_15844#0 CGTGTCCCACGCACGCACACCTTCCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGC 120
consensus_15844#1 C---CTTCGACTTTGTTCGACTCCCCTCCTTCCCGGCAGAGGAGAGGAGAGGAGAGGAGA 73
* * * * ** *** ** ** * * * **
consensus_15844#0 AG--CCGCCCCGCACCCGCGCCCG-CACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGG 177
consensus_15844#1 GGACTCATCCATCATCATCAATCAACGCCATGACGAGCTCCTCATCTCCTTCCCGAAAGG 133
* * ** ** * * * * **************** ** ******** ****
consensus_15844#0 TGCTGAGCAAGATCGCGTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACC 237
consensus_15844#1 CGCTGAGCAAGATCGCTTGCAATCGGCTGCAGAAGGAGCTCGCCGAGTGGCAGGTCAGCC 193
*************** ***** ******************** ************* **
consensus_15844#0 CTCCCTCCGGCTTCAAGCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCG 297
consensus_15844#1 CTCCCTCCGGGTTCAAGTACAGGGTCTCCGATAACCTCCAAAGGTGGGTAATCGAGGTCA 253
********** ****** *** **** **** ** ***** ******** *********
consensus_15844#0 CGGGGGCTGCGGGCACGCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTG 357
consensus_15844#1 CCGGAGCGGCGGGCACGCTCTACGCCGGCGAGACATACCAGCTGCAGGTCGACTTCCCTG 313
* ** ** ************** ***** *********** ******* **********
consensus_15844#0 AGCATTACCCCATGGAGGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGC 417
consensus_15844#1 AGCATTATCCCATGGAGGCGCCTCAGGTCATTTTTCTCAACCCGGCGCCGATGCATCCAC 373
******* *********** ** ******** ***** * ** ***** ******** *
consensus_15844#0 ACATTTACAGCAATGGGCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGA 477
consensus_15844#1 ACATTTACAGCAACGGGCACATCTGTTTAGATATACTGTATGATTCTTGGTCACCTGCAA 433
************* ***** *************** ******* ** ******** ** *
consensus_15844#0 TGACCGTTAGTTCTGTTTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGC 537
consensus_15844#1 TGACTGTCAGTTCGGTCTGCATCAGCATTTTGTCAATGTTGTCAAGTTCACCAGCAAAGC 493
**** ** ***** ** ** ***** ** ***** *********** *************
consensus_15844#0 AACGTCCTGCCGACAATGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGG 597
consensus_15844#1 AACGCCCTCAAGACAATGACCGCTATGTTAGGAATTGCCGCAATGGGAGGTCGCCGAAGG 553
**** *** ******** ******** ***** *************************
consensus_15844#0 AGACCAGGTGGTGGTTTCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTC 657
consensus_15844#1 AGACCAGATGGTGGTTCCATGATGACAAAGTGTAAGAGGAACTAGTTGGCACTT--TTGC 611
******* ******** **************** * ** * * * * ** * *
consensus_15844#0 TCCTCAGCAACCCTTTTACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGA 717
consensus_15844#1 CATTCAGTAATCGTAATACCTTGAAATCT---CTTGCAAGGGG-----AAAATGAGATGA 663
**** ** * * **** * ** ** ** ** * * *******
consensus_15844#0 TT-TAGGCATATTTTTAAGCGA---TCTATTTGACCGC-AAATTAACATGCCTTTGTGGT 772
consensus_15844#1 ATGTAGGCTTACTGTTAAGCATCACTCTATTGGACCACCAAGCTTAACTGCTGGGTTGGT 723
* ***** ** * ****** ****** **** * ** * * *** ****
consensus_15844#0 TTGTAAATGAATG---TGAACCTGTATCGAATCCTAGACTTATTAATTACTATACCTTGG 829
consensus_15844#1 TTGTACATGAGCTGCCTGCACACATGTCAAGTCATGAATATAATA-TTACCATAAAT-GA 781
***** **** ** ** * ** * ** * * ** ** **** *** * *
consensus_15844#0 ATATATAGAATAATTACATGTGTATCTTGCTT-ATTGCCCAAAATAGAGGCATCAAATGC 888
consensus_15844#1 TTATACAGAATAA--GCAAGTGTACCATGCTTGATTCTNCTGAAAAAA------------ 827
**** ******* ** ***** * ***** *** * ** * *
consensus_15844#0 AGTCAAAACTTTGGTTTAAAAAAAA 913
consensus_15844#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||