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Oryza sativa
cluster # 15885 cluster # 15885       Sequences # 26       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15885#0 length = 2169 sequences # 18  
consensus_15885#1 length = 756 sequences # 4  
consensus_15885#2 length = 699 sequences # 4  

consensusID : consensus_15885#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 2169
fasta sequence
                              [TCGCCTCCGCGTCGCCGCCTTCAAAAATACTAATAAAAAAGAAAAAAAACGCAAAAAGAAAAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACT--TCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC-AGTAT-CGGGAGATGAAGATGAA-GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA-GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA-TTGGACCAGACAAGTACTGAGCTAAT-CAATGC-GGA-TGACTGCA-TTATACCAAAA-CAG-AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA-TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCA-GGATCCCACT-GGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCT-GTCAGAATTTTTGACATTGAGTACTTT-GATTTGCTG-AAGCACTATGTCTTCCCAT-GGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTG-CATGTGGTGAT-GCCATTTGTTAAGCGAAATGTG-CGTCTTTGCTGA-GCTT-AGCAGT-CCTCCGATT-ATGTGCTG-CATAACTTGCAC-AACTTGTGGAAGGCGC-ACTAATAGTGAAAAGCTCATTAAA-GAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCA-CCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCA-TTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTCGTTTATACAAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGAAATTGCTAGTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATTCTCTATTATCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK111715             [TCGCCTCCGCGTCGCCGCCTTCAAAAATACTAATAAAAAAGAAAAAAAACGCAAAAAGAAAAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACT  TCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCA GGATCCCACT GGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCT GTCAGAATTTTTGACATTGAGTACTTT GATTTGCTG AAGCACTATGTCTTCCCAT GGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTG CATGTGGTGAT GCCATTTGTTAAGCGAAATGTG CGTCTTTGCTGA GCTT AGCAGT CCTCCGATT ATGTGCTG CATAACTTGCAC AACTTGTGGAAGGCGC ACTAATAGTGAAAAGCTCATTAAA GAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCA CCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATAGAGGTAGATATATATGTATAGCCGTCCTATTTCA TTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTCGTTTATACAAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGAAATTGCTAGTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATTCTCTATTATCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAGTA                         ]
[+] EMBL CB672357             [          GTCGCCCTTTTAAAAAATACTAATAAAAAAGAAAAAAAACGCAAAAAGAAAAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACT  TCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB672524             [                         AATACTCTTTAAAAAGAAAAAAAACGCAAAAAGAAAAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACT  TCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGGTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS11368A            [                                                                                        AAAGAAAAAAACT  TCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGG CGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTTTGTTCCGGAGGGATCAAGTAT CGGGAGATGAAGATGAA GGA TNCAGG ATT TCAG ACCTag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB620632             [                                                                                              gAAACCTCCTCCCGAATTCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB664844             [                                                                                                    T  TCCCGAATTCCCCATCCTCCCCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCANCAGAAGTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCA GGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU056013             [                                                                                                                   CATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAAGGGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCATTTGGACCAGACAAGTACTGAGCTAATCCAATGCGGGATTGACTGCATTTATANCAAAACCAGAAGAGGGCATGGTTCACAGTCCGTTGCNATGGTCCAGGTCACAACTATGGCTGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB671254             [                                                                                                                             CGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C26238               [                                                                                                                                         CCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATTTCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGANTCCGCTGACTGATGTTTCCGTGGAGGACGTTAGGGATGGGANGGACATGCAGGGGATCCCCTGGGAGANGATTGTTTTCCGGAGGGNTC AGTATCCGGGAGATGAAGNTGAAGGAATTACAGGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU056611             [                                                                                                                                                                                                                                                                                                                                                                                                           GGGAAGGACATGCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATC AGTAT CGGGAGATGAAGATGAA GAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGATTAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCAGGGATCCCACTGGGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCTGGTCAGAATTTTTGACATTGAGTACTTTGGATTTGCTGAAAGCACTATGTCTTCCCATGGGTCTGTGAATAGCGTTTCGGTGAGCCCAAAANGGGGACTGTTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU225297             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gccgctCCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAA GGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAATCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB664804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gtAGGAAGCTCGGAATGACTGCAAGAGAGTAGAACC GGATAGTCCTTACTACCATTTCCAGTACAGTACAAGGCGGGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSC111421            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ncagagCAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCA TTGGACCAGACAAGTACTGAGCTAAT CAATGC GGA TGACTGCA TTATACCAAAA CAG AGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGA TAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATNCTATTACCAACTCTTTGGAGATATATCA GGNTCCCACT GGATCTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB664845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAATGCTATTACCACTTCTTTGGAGATATATCA GGATCCCACT GGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCT GTCAGAATTTTTGACATTGAGTACTTT GATTTGCTG AAGCACTATGTCTTCCCAT GGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTG CATGTGGTGAT GCCATTTGTTAAGCGAAATGTG CGTCTTTGCTGA GCTT AGCAGT CCTCCGATT ATGTGCTG CATAACTTGCAC AACTTGTGGAAGGCGC ACTAATAGTGAAAAGCTCATTAAA GAAATTTGGCTGCTTTAGTTTTTAGCTGCAGCA CCTGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB672358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACATTGAGTACTTT GATTTGCTG AAGCACTATGTCTTCCCAT GGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTG CATGTGGTGAT GCCATTTGTTAAGCGAAATGTG CGTCTTTGCTGA GCTT AGCAGT CCTCCGATT ATGTGCTG CATAACTTGCAC AACTTGTGGAAGGCGC CCTAATAGTGAAAAGCTCATTAAA GAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCC CCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAAGGTCACTTAGGAACTGATGGAGGTAGATATATccttaaagg                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB096244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGTCCTTGGGGACCATAAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCTGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGGGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTAAACTG CATGTGGTGAT GCCATTTGTTAAGCGAAATGTG CGTCTTTGCTGA GCTT AGCAGT CCTCCGATT ATGTGCTG CATAACTTGCAC AACTTGTGGAAGGCGC ACTAATAGTGAAAAGCTCATTAAA GAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCA CCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACGTAGGAACTGATGGAGGTAGATATATATGTATAGCCGGCCTATTTCATTTTTTCTNCAAATCGATGNACATATAGnt                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB620633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTG CATGTGGGGAT GCCATTTGTTAAGCGAAATGTG CGTCTTTGCGGA GCTT AGCAGT CCTCCGATT ATGTGCTG CATAACTTGCAC AACTGGGGGAAGGCGC ACTAATAGTGAAAAGCTCATTAAA GAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCA CCTGAAGCTCATGAATGGCCCCGAACGGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACGTAGGAACTGAGGGAGGTAGATATATATGTATAGCCGTCCTATTTCA TTTTTCTCCAAATGGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCAAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAATGATCATAGGTGTTCCACTCGGTGGTTCGGCTCTGGTTTATACAAGAACAGGGAATTTCCCAGCAGCGCCCTTTTCAGTCCTTGGGACACGTAGAAATTGCTAGTCGGTGGCTGGGACCCGTTCTCTCTTTATCAAACCGAACATGCTGGGAAT                                                                              ]
[+] EMBL AU056612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATTATTTGAACTGCCATGTGGTGATCNCCATTTGTTAAGCGAAATGTGCCGTCTTTGCTGAGGCTTNAGCAGTCCCCCCGATTAATGTGCTGCCATAACTTGCACNAACTTGTGGAAGGCGCNCCTAATAGTGAAAAGCNCATTAAAGGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCA TTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTCGTTTATACAAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGAAATTGCTNGTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATTCTCTATTATCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15885#0 TCGCCTCCGCGTCGCCGCCTTCAAAAATACTAATAAAAAAGAAAAAAAACGCAAAAAGAA AAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACTTCCCGAATTCCCCATCCTC CTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATT TCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTA GAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTC GGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCG CTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGG GAGAAGATTGTGTTCCGGAGGGATCAGTATCGGGAGATGAAGATGAAGAATTACAGGAAT TATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAAG GATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACAT TTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAAC CAATCAGTGACACATTGGTCATCATTGGACCAGACAAGTACTGAGCTAATCAATGCGGAT GACTGCATTATACCAAAACAGAGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTC ACAACTATGGCTGTAGATGATAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATA TGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAAT GCTATTACCAACTCTTTGGAGATATATCAGGATCCCACTGGATCTAGACGGTTGGTGGCT GCTAACAATGACTGCTCTGTCAGAATTTTTGACATTGAGTACTTTGATTTGCTGAAGCAC TATGTCTTCCCATGGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCT GTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGT GCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATC TTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAG TCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGAC GGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCA GACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGC CCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAG TTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGC GAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACA ACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTT TTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGT CTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCAT TTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGC ATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGA AGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTCGTTTATAC AAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGAAATTGCTA GTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATTCTCTATTA TCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAGTAAAAAAAAAAAAAAAAA AAAAAAAAA



consensusID : consensus_15885#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 756
fasta sequence
                              [GGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCA-GAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCT-GGA-TTGT-CATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCCCCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATAGGTATAGCCGTCCTATTTCATTTTTCTCCAAAACCTTAAAAGA]

[-] EMBL CB672525             [GGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCA GAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCT GGA TTGT CATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCCCCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATAGGTATAGCCGTCCTATTTCATTTTTCTCCAAAACCTTAAAAGA]
[-] EMBL CB671255             [  GGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTTTCTTCAGACGGGCGGTTCTTGGCTACTGCA GAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCT GGA TTGT CATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCCCCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCA                       ]
[+] EMBL CA766743             [           GCTGTCCTTGGGGACCCTAAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCANGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCT GGA TTGT CATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCT                                                                                                                                                                                                                                               ]
[+] EMBL C27914               [                                                         GTGGCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTNCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCANAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCA GAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGGATTTGTNAATTCAGCCCAGACGGCGAagg                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_15885#1 GGGGACTGTTTGCTGTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTG GCAAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATC CTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTA GAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCA AGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCT ACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTG GATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACG GTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGAT GCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCT GCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTT TGCTGCTTTAGTTTTTAGCTGCAGCCCCTGAAGCTCATGAATGGCCCCGAACTGTAAAAT TCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATAGGTATAG CCGTCCTATTTCATTTTTCTCCAAAACCTTAAAAGA



consensusID : consensus_15885#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 699
fasta sequence
                              [CAGAGTCTGTGGCTGTACTTGCCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGCCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCATTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAAGAAAAAAAAAAAAAAAA]

[+] EMBL AU056014             [CAGAGTCTGTGGCTGTACTTGCCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGCCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCATTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAGATTTTAGCTCAAGAAAAAAAAAAAAAAAA]
[+] EMBL AU181818             [                                                                                                                             GACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCATTTTTCTCCAAAaa                                                                                                                                             ]
[+] EMBL AU102165             [                                                                                                                                                                                                                                                                                          TGTGGTGATGCCATTTGTNAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTANAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCATTTTTCTCCAAAaaaaaa                                                                                                                                         ]
[+] EMBL AU095878             [                                                                                                                                                                                                                                                                                                                   AATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCATTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGAAGAAa                             ]


>consensus_15885#2 CAGAGTCTGTGGCTGTACTTGCCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTT CAGACGGCCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCAT ATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCAT TCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCA TAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGT TAAGCGAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTT GCACAACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTT AGTTTTTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCT TTTGTCTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTAT TTCATTTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAA CGAGCATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACAT CCGGAAGAAGATTTTAGCTCAAGAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15885#0      TCGCCTCCGCGTCGCCGCCTTCAAAAATACTAATAAAAAAGAAAAAAAACGCAAAAAGAA 60
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      AAGGGAGGGTAGGAGAGAAAAAAAAAAAAAAGAAAAAAACTTCCCGAATTCCCCATCCTC 120
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      CTCCGCGCCGCCTCGCCGGAATTCGCCTCGAGGTCCGGCTAATCGAAGCGGCGGTTGATT 180
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TCTAGGTCGGATCGGGGGGGCGTCGGGAGAATGGACGAGTTCGAGCTGGAGGATAACCTA 240
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTC 300
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCG 360
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      CTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCAGGGGATCCCCTGG 420
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GAGAAGATTGTGTTCCGGAGGGATCAGTATCGGGAGATGAAGATGAAGAATTACAGGAAT 480
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGACTGCAAGAAAGTTGAAAAG 540
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACAT 600
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAAC 660
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      CAATCAGTGACACATTGGTCATCATTGGACCAGACAAGTACTGAGCTAATCAATGCGGAT 720
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GACTGCATTATACCAAAACAGAGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTC 780
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      ACAACTATGGCTGTAGATGATAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATA 840
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAAT 900
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GCTATTACCAACTCTTTGGAGATATATCAGGATCCCACTGGATCTAGACGGTTGGTGGCT 960
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GCTAACAATGACTGCTCTGTCAGAATTTTTGACATTGAGTACTTTGATTTGCTGAAGCAC 1020
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TATGTCTTCCCATGGTCTGTGAATAGCGTTTCGGTGAGCCCAAAAGGGGGACTGTTTGCT 1080
consensus_15885#1      ----------------------------------------------GGGGACTGTTTGCT 14
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGT 1140
consensus_15885#1      GTCCTTGGGGACCATGAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGCAATCGGT 74
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATC 1200
consensus_15885#1      GCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATC 134
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAG 1260
consensus_15885#1      TTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAG 194
consensus_15885#2      -------------------------------------------------------CAGAG 5
                                                                              *****

consensus_15885#0      TCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGAC 1320
consensus_15885#1      TCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGAC 254
consensus_15885#2      TCTGTGGCTGTACTTGCCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGAC 65
                       **************** *******************************************

consensus_15885#0      GGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCA 1380
consensus_15885#1      GGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCA 314
consensus_15885#2      GGCCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCA 125
                       ** *********************************************************

consensus_15885#0      GACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGC 1440
consensus_15885#1      GACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGC 374
consensus_15885#2      GACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGC 185
                       ************************************************************

consensus_15885#0      CCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAG 1500
consensus_15885#1      CCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAG 434
consensus_15885#2      CCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAG 245
                       ************************************************************

consensus_15885#0      TTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGC 1560
consensus_15885#1      TTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGC 494
consensus_15885#2      TTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGATGCCATTTGTTAAGC 305
                       ************************************************************

consensus_15885#0      GAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACA 1620
consensus_15885#1      GAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACA 554
consensus_15885#2      GAAATGTGCGTCTTTGCTGAGCTTAGCAGTCCTCCGATTATGTGCTGCATAACTTGCACA 365
                       ************************************************************

consensus_15885#0      ACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTT 1680
consensus_15885#1      ACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTT 614
consensus_15885#2      ACTTGTGGAAGGCGCACTAATAGTGAAAAGCTCATTAAAGAAATTTTGCTGCTTTAGTTT 425
                       ************************************************************

consensus_15885#0      TTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGT 1740
consensus_15885#1      TTAGCTGCAGCCCCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGT 674
consensus_15885#2      TTAGCTGCAGCACCTGAAGCTCATGAATGGCCCCGAACTGTAAAATTCTGTCCCTTTTGT 485
                       *********** ************************************************

consensus_15885#0      CTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCAT 1800
consensus_15885#1      CTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATAGGTATAGCCGTCCTATTTCAT 734
consensus_15885#2      CTAAAATGTCACTTAGGAACTGATGGAGGTAGATATATATGTATAGCCGTCCTATTTCAT 545
                       *************************************** ********************

consensus_15885#0      TTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGC 1860
consensus_15885#1      TTTTCTCCAAAACCTTAAAAGA-------------------------------------- 756
consensus_15885#2      TTTTCTCCAAATCGATGTACATATAGTTGTGGTATCCCGGTTCTTTGCAACGCAACGAGC 605
                       *********** *  *  *                                         

consensus_15885#0      ATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGA 1920
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ATTGGCAACAAAATAGCAAGGATAAATTATGCCAGAAGTGGATGGTTCGGCACATCCGGA 665
                                                                                   

consensus_15885#0      AGAAGATTTTAGCTCAATGATCATATGTGTTCCACTCGGTTGTTCGGCTCTCGTTTATAC 1980
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      AGAAGATTTTAGCTCAAGAAAAAAAAAAAAAAAA-------------------------- 699
                                                                                   

consensus_15885#0      AAGAACAGGGAATTTCCCAGCAGCGACCTTTTCAGTCCTTGGGACACGTAGAAATTGCTA 2040
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      GTCGGTGGCTCGGAGCCGTTCTCTCTTTATCAAACCGAACATGCTTGGAATTCTCTATTA 2100
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      TCATAATTTTGCAATATCCATTTATAGATATTGAAATCAAAGTAAAAAAAAAAAAAAAAA 2160
consensus_15885#1      ------------------------------------------------------------
consensus_15885#2      ------------------------------------------------------------
                                                                                   

consensus_15885#0      AAAAAAAAA 2169
consensus_15885#1      ---------
consensus_15885#2      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)