These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15937#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 2016 fasta sequence [TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA-TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT-GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA-GGAACATTTGGAGCATCAGTTGCATC-ATATGAT--CAAGAA-TATTTGAAGAACAC-AAC-TCCACCTCC-TGCT-GAAT-CTGCATA-TAGG-T-TAT-GGTGGTACC-AAGTTT-GC-AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG-ATAG-TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT-GGACTTGTG-CAGAAATGTTTTT-GGGG-AA--GGAGTT-T-ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC-TCCA-GAAGCTGTGA-AC--A-AAGTAAGAAAG-CA-GATCGTCGATCA-CA-TTGATTTATGGTTATCAGAATGTCAAGAG-CAAGGACACGACAATGAGCCA-TTGCTGGG-CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG-ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA-CCA-TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA] [+] EMBL AU032136 [TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGNATCGTCTCCTCTNCGNCGCCGCAGCGGAAGCGGAAGCNGGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGG NCNGCAGTCGCCGCCGTGGCGGTGCTCCTNCTGCTGGCTCCCGGGGCGGAG CGAGTCGGGCTGTGGCTGCCGNCTCCCACCGGTNGCGGGGGGCG CTCGGCGGCG CGCCGAGCCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGA ] [+] EMBL CB640576 [ AAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTTCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCG ] [+] EMBL CB640615 [ AAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCNGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCANACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAACTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGT ] [+] EMBL AK070496 [ CCACTTCTGACTTCTCGCCAAGGGAGGTTGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAc ] [+] EMBL CB674774 [ GCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAA ] [+] EMBL CB664162 [ CTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAGGAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGG ] [+] EMBL CB640391 [ GCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGC ] [+] EMBL CB640286 [ GCCGCCGCAGCGGAAGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGA TCGGGCTGTGGCTGCCGCCTCCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCTCTCTGCACGTCCCTGACGCCGGAGGAGCGGTGGCTGGACCTCACCCTTGACCACTTGCTCCCCACCGCCCATCGGCTGTTCAAGCTGCGTTGCTATGAATTCCTT ] [+] EMBL CF322980 [ ACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGGAGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTTCAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCA ] [+] EMBL CF324451 [ TCGACCACTTCAACCCCACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCCTTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGATCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTA ] [+] EMBL CF323506 [ ACCGACCATCGGCAATTCAAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTATATATCTGTGGAGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGCAAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGA ] [+] EMBL AU075501 [ TGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTANTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGNGCTCCCCAATAGTTNAAAGCAAAGAAGAA ] [+] EMBL CF324350 [ GAGTTCAGGAGTTGTTCTTTCTGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TATGGGTGGTACC AAGTTT GCAAGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TG ] [+] EMBL CF323266 [ CAAAGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG TNTAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAGNTGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGGAAA GGAGTT TNACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGA ] [+] EMBL CF324015 [ gCAACTTCAGTCTGGTCGCAATGCAGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATA GGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGGNT TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATGAATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGGG AAANGGAGTTNT ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGA ] [+] EMBL CF326654 [ TTTCTACTGGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAATAGTT GAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGATTATTACATATTGAACATTTGGAGCATCAGTTGCATC ATATGAT CAAGAA TATTTGAAGAACAC AAC TCCACCTCC TGCT GAAT CTGCATA TAGG T TAT GGTGGTACC AAGTTT GC AGTGAAGTTGCATATTTCCAAGTGGCTCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACAAGGTACCATTT GGACTTGTG CAGAAATGTTTTT GGTT TA GGAGTT T ACCCTGATGTATTCATGACATATTTATACTA ] [+] EMBL AU032137 [ CATCNATTTGGTTCCAAGAATTTTTTGGAGGACCCNAACTTCCACCTCCNTGCTGGAATCCGGCATATTAGG T TAT GGTGGTACCAAAGTTTNCC AGTGAAGTTGCATATTCCCAAGTGGCCCCAAAAAATG ATAG TGTCCGTTCTGCAAAGATTGACACCAGGTCCCATTT GGACTTGTG CAGAAATGTTTTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAA CTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAA ] [+] EMBL C99358 [ ATTTGGGACTTGTGCCAGAAATGTTTTTGGGGG AA GGAGTT T NCCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAG ATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAA CTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAAaaaaaa ] [-] EMBL CB664161 [ TTT GGGG AA GGAGTT T ACCCTGATGTATTCATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAca ] [-] EMBL CB674775 [ TACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAACGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTCATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA AC A AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGAT ] [+] EMBL BM419696 [ TGGATGCCCTCAAGCTCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGAGAC C AAGTAAGAAAG CA GATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCA TTGCTGGGCCAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTTAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAA ] [+] EMBL BM419796 [ GGTGACTCGTCTAATTGTTCATC TCCA GAAGCTGTGA ACCNC AAGTAAGAAAGNCA GATCGTCGATCACCACTTGATTTATGGTTATCAGAATGTCAAGAGCCAAGGACACGACAATGAGCCACTTGCTGGG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTTAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTACCCACTGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAA ] [+] EMBL BI808452 [ GTTCATCTTCCACGAAGCTGTGACAC ACAAGTAAGAAA CACGATCGTCGATCA CA TTGATTTATGGTTATCAGAATGTCAAGAG CAAGGACACGACAATGAGCCC TTGCT GG CAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACTAGTATGAATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACCATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTC ATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAA ] [-] EMBL BE230510 [ CATAGCTACTTACTGATTACCTGCTCGAGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGACCAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTACGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAA ] [+] EMBL AU031096 [ TATGTTCAAAAGGCCATGAGTACAAGACAATGCAGNTGTCATTTAGACTAGTATG ATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCAAGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTGTCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTA CCA TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAAGATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15937#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence [TCCTCTCCGCCGCCGCAGCGGAAGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGCCGNCANTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCGATCGGNCTGTGGCTGCNGCNTCCCACCGGTGGNGGGGGGCGCTTCGGCGGCGCGCCGANCCAGGNAGGTACCTAANGCAGGAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTNAAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTATATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGAAAAAAAGTTTNGTT] [+] EMBL OSC668 [TCCTCTCCGCCGCCGCAGCGGAAGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGCCGNCANTCGCCGCCGTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCGATCGGNCTGTGGCTGCNGCNTCCCACCGGTGGNGGGGGGCGCTTCGGCGGCGCGCCGANCCAGGNAGGTACCTAANGCAGGAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTNAAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTATATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGAAAAAAAGTTTNGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15937#0 TCAGTTCTCAAAAAAAAAAAAAAAATCCTCTTCCACTTCTGACTTCTCGCCAAGGGAGGT 60 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TGCTTCGCTTTGCTTGCTCGCGTCGGAAACGCATCGTCTCCTCTCCGCCGCCGCAGCGGA 120 consensus_15937#1 --------------------------------------TCCTCTCCGCCGCCGCAGCGGA 22 ********************** consensus_15937#0 AGCGGAAGCGCGCGCGAGAGAGAGATGGCGTCCAGCGCCGTCGGCGCCGCAGTCGCCGCC 180 consensus_15937#1 AGCGNAAGCNNGCGCNANANANAGATGGCGTCCANNGCCGTCGGC-CGNCANTCGCCGCC 81 **** **** **** * * * ************ ********* * ** ******** consensus_15937#0 GTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGCCGATCGGGCTGTGGCTGCCGCCT 240 consensus_15937#1 GTGGCGGTGCTCCTGCTGCTGGCTCCCGGGGCGGAGC-GATCGGNCTGTGGCTGCNGCNT 140 ************************************* ****** ********** ** * consensus_15937#0 CCCACCGGTGGCGGGGGGCGCCTCGGCGGCGCCGCCGCACCAGGCAGGTACCTGACGCAG 300 consensus_15937#1 CCCACCGGTGGNGGGGGGCGCTTCGGCGGCGC-GCCGANCCAGGNAGGTACCTAANGCAG 199 *********** ********* ********** **** ***** ******** * **** consensus_15937#0 GAGGAGCGGTGGATGGACCAGACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTC 360 consensus_15937#1 GAGGAGCGGTGGATGGACCAAACCCTCGACCACTTCAACCCCACCGACCATCGGCAATTN 259 ******************** ************************************** consensus_15937#0 AAGCAGCGTTACTATGAATTCCTTGATTACTACCGAGCTCCAAAAGGGCCAATTTTCTTA 420 consensus_15937#1 AAGCAGCGTTACTATNANTTCCTTGATTACTACCGAGCTTCAAAAGGGCCAATTTTTTTA 319 *************** * ********************* **************** *** consensus_15937#0 TATATCTGTGG-AGAATCTTCGTGCAACGGGATTCCTAACAGCTACTTAGCTGTGATGGC 479 consensus_15937#1 TATATCTTTGGGAGAATTTTCGTGCAAGGGGATTTCTAACAGCTAATTAGCTGTAATGGA 379 ******* *** ***** ********* ****** ********** ******** **** consensus_15937#0 AAAGAAGTTTGGTGCGGCAGTGGTCTCCCCTGAGCATCGGTACTACGGAAAGAGTTCCCC 539 consensus_15937#1 AAAAAAGTTTNGTT---------------------------------------------- 393 *** ****** ** consensus_15937#0 TTTTGAGAGTTTGACAACGGAAAATCTAAGGTTCTTGTCATCAAAACAGGCCTTGTTTGA 599 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TCTGGCTGTTTTCCGCCAATATTATCAGGAAACTTTGAATGCTAAGTATAATCGCTCAGG 659 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGCAGACAGTTCTTGGTTTGTTTTTGGAGGGTCGTACGCTGGAGCACTTAGTGCTTGGTT 719 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 CAGATTGAAGTTCCCTCACTTGACATGTGGAAGTCTTGCGAGTTCAGGAGTTGTTCTTTC 779 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TGTTTACAACTATACTGACTTTGACAAACAGATTGGTGAGTCAGCTGGCCCTGAATGCAA 839 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGCAGCACTACAAGAAACAACAAAACTTGTTGACGGACAACTTCAGTCTGGTCGCAATGC 899 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGTTAAACAACTCTTTGGAGCATCAACGTTAGCAAATGATGGTGACTTCCTCTTTCTACT 959 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 GGCGGATGCAGCAGCTATTGCGTTCCAATACGGTAATCCTGATGCTTTGTGCTCCCCAAT 1019 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGTTGAAGCAAAGAAGAATGGCACAGATTTGGTGGAAACATTTGCTCGCTATGTGAAAGA 1079 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TTATTACATAGGAACATTTGGAGCATCAGTTGCATCATATGATCAAGAATATTTGAAGAA 1139 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 CACAACTCCACCTCCTGCTGAATCTGCATATAGGTTATGGTGGTACCAAGTTTGCAGTGA 1199 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGTTGCATATTTCCAAGTGGCTCCAAAAAATGATAGTGTCCGTTCTGCAAAGATTGACAC 1259 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AAGGTACCATTTGGACTTGTGCAGAAATGTTTTTGGGGAAGGAGTTTACCCTGATGTATT 1319 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 CATGACAAATTTATACTATGGAGGCACAAGAATTGCAGGTTCGAAAATTGTTTTTGCAAA 1379 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 CGGCTCTCAAGATCCATGGCGCCATGCTTCTAAGCAGAAATCATCAAAAGAATTGCCGTC 1439 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 ATACTTAATTGAGTGCAGCAATTGCGGACATTGCAGTGATCTATCTGGATGCCCTCAAGC 1499 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TCCTTCACATATTGAAGGTGACTCGTCTAATTGTTCATCTCCAGAAGCTGTGAACAAAGT 1559 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AAGAAAGCAGATCGTCGATCACATTGATTTATGGTTATCAGAATGTCAAGAGCAAGGACA 1619 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 CGACAATGAGCCATTGCTGGGCAGTAGATGGAGCATAGCTACTTACTGATTACCTGCTCG 1679 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGCTACCAACCATATGTTCAAAAGGCCATGAGTACAAGACAATGCAGCTGTCATTTAGAC 1739 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TAGTATGATTCACTCAAATAATACGGACAGTTGGTTGTTCCAAGCATTCTCATGGTACCA 1799 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 AGCATTATCCTCAGGACTGCGGTAACAATTGCTCAAACACTACTATGGTGACGACCTCTG 1859 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TCATTTGTCAATAACCTTACAGGTTGCTCTCAGGCTCCCCCATTCTGCAGAAGATTACCA 1919 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 TGATATGTAAAATGTTACTGAATTATGTACAAGATAAACTTTGTTTATTCATGAGACTAA 1979 consensus_15937#1 ------------------------------------------------------------ consensus_15937#0 GATATTAGATAACCGGGTAAAAAAAAAAAAAAAAAAA 2016 consensus_15937#1 ------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||