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Oryza sativa
cluster # 15949 cluster # 15949       Sequences # 26       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15949#0 length = 1242 sequences # 11  
consensus_15949#1 length = 924 sequences # 6  
consensus_15949#2 length = 633 sequences # 1  
consensus_15949#3 length = 560 sequences # 8  

consensusID : consensus_15949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1242
fasta sequence
                              [TCCTTTTTTTTTTTGATATAATGACA-TAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACT-GGAGCATGTGCGCGGCGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCTGGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGCGCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGT-TCTCCTGCTCCACGCGCGCGTACTGCCCGGCGATTTCGCTGGC-GCGCGCCAGCACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA-TTTCCACAAACACCTTGTCTAC-AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA-AGAAGAACACGAAGAAGAAGAACA-ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT-CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA]

[+] EMBL CB653185             [TCCTTTTTTTTTTTGAGATAATGACANTAGTTTATAACATTACCTAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACT GGAGCATGTGCGCGGCGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCTGGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGCGCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGT TCTCCTGCTCCACGCGCGCGTACTGCCCGGCGATTTCGCTGGC GCGCGCCAGCACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA AGAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU093772             [         TTTTTGATATAATGACA TAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGNTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACTGGGAGCATGTNCGCGGCGGCGGGGCAGGGGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB655864             [               ATATAATGACA TAGTTTCTTACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACT GGAGCATGTGCGCGGCGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCTGGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGCGCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGT TCTCCTGCTCCACGCGCGCGTACTGCCCGGAGATTTCGCTGGC GCGCGCCAGCACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB649170             [                                                  AAAGAAGATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCCCTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACT GGAGCATGTGCGCGGCGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCTGGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGCGCAGCCTGTCGCCGAGCTCGGCGGCCCGCGCCCGGAGCACCGTGT TCTCCTGCTCCACGCGCGCGTACTGCCCGGCGATTTCGCTGGCGGCCCGGCAACACGCGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CA753888             [                                                                                                                                                                                                                                                                                                                                                                                                                CGGAGCACCTCGTGNACGCTGCGCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGTCTC CCTGCTCCACGCGCGCGTACTGCCCGGCGATTTCGCTGGC GCGCGCCAGCACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA AGAAGAACACGAAGAAGAAGAACA ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTAAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATG                                                                                                                                                                                                                                                 ]
[-] EMBL CB661889             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGGAGCACCGTGT TCTCCTGCTCCACGCGCGCGTACTGCCCGGCGATTTCGCTGGC GCGCGCCAGCACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA AGAAGAACACGAAGAAGAAGAACA ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCA         ]
[-] EMBL CB653184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACGCGCGCGTTGTCCGCCTGCAGCCTCGCCACCTCTTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCACCCGA AGAAGAACACGAAGAAGAAGAACA ACACCAAGAGAGCTCTACTCCTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAACCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCC      ]
[-] EMBL CB655863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCTCGCCACCTCGTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA AGAAGAACACGAAGAAGAAGAACA ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACACCCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAAT  ]
[-] EMBL CB649169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACCTCTTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGA AGAAGAACACGAAGAAGAAGAACA ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTAACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA]
[-] EMBL CA756207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGTGCTGCTGCTTCCGCAGCCGCGACCGCCTCGCCGACTNCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTNCGCGGCCACCACCACCCCCGCCGAGTCNCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACA TTTCCACAAACACCTTGTCTAC AAACAGCTGCTTCTTCTGCTGCTACGATTATNTAATCAACCGA AGAAGAACACGAAGAAGAAGAACA ACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGAT CACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGC                                                                    ]
[-] EMBL AU065227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cnACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTNGTCCGCCGCCACAACCACCCCCGCCGAGTCCCCTTCCGACGACCCCGCCGGCGNCAGCGACGACGACGACATTTTCCACACACACCTTGTCTACAAAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGATAGAAGAACNCGAAGAAGAAGAACANCCAACAAGAGAGCTCTACTACTACTAGTACCAATGGCGGATTGACGCGGAGAAGATGTTTCCCCCAGAATTATGAGTTCCACATAAACCCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA]


>consensus_15949#0 TCCTTTTTTTTTTTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAA TTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAA AATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGA AATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCT TAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACTGGAGCATGTGCGCGG CGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCT GGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGC GCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGTTCTCCTGCTCCACGC GCGCGTACTGCCCGGCGATTTCGCTGGCGCGCGCCAGCACGCGCGCGTTGTCCGCCTGCA GCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACCGCC TCGCCGACTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGGTCCGCCGCCACCACCA CCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACATTTCCA CAAACACCTTGTCTACAAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGAA GAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACTACTACTAGTAACAATGGC GGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATCACATAAAACCAGTAGAGG AAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATA AAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCT CCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACC ACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCG GGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGA AATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA



consensusID : consensus_15949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 924
fasta sequence
                              [CGCAATTTTACATTGATGATCACAAGAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGG-TCCGCCGCC-ACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACATTTCCACAAACACCTTGTCTACAAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAA-TTATGA-GATCACATAAAACCAGTAGAGG-AAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCAAAGGATGAGGGGAA]

[-] EMBL AK071530             [CGCAATTTTACATTGATGATCACAAGAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGTGG TCCGCCGCC ACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCGACGACGACGACATTTCCACAAACACCTTGTCTACAAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAA TTATGA GATCACATAAAACCAGTAGAGG AAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCAAAGGATGAGGGGAA]
[-] EMBL CA753462             [                                                                                                                                                                                                                                                                                                    GCCGTTTTTCCCTCC GTGGTTCCGCCGCCGACC CCACCCCCCGCGAGTTCCCGTCCGACGACCCCCCCGGCGACAGCGACGACGACGACATTTCCACAAACACCTCGTGTACAAACAGCTGCTTCTTCTGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAA TTATGA GATCACATAAAACCAGTAGAGG AAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCAA             ]
[-] EMBL C93608               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGAGCTCTACTACTACTAGTNACAATGGCGGATTTACNCGGAGAAGATNATTCCCCCAGAATTTATGAGGATCACATAAAACCAGTAGAGGAAANACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTNAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACNAAAATTACGATCTTTCTCACCACCAAGANCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACC                     ]
[-] EMBL OSR3078A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGGAGAAGATGATTCCCCCAGAA TTATGA GATCACATAAAACCAGTAGAGG AAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCC AATCCCAACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCANCGGGAGCTGATCTGCTCNAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGA                                 ]
[-] EMBL OSS1250A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ggtnACATAAAACCAGTAGAGG AAGACAACCGAG AGGAGTGGAGGAAGCAGGANCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATNACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCC                    ]
[-] EMBL AU062467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATNACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATC               ]


>consensus_15949#1 CGCAATTTTACATTGATGATCACAAGAGGAATTGATATAATGACATAGTTTATAACATTA CATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACC ATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAG CAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTT CTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCTGTTCGACAGCCGCCGCTTC TCCCTCCGGTGGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCC GGCGACAGCGACGACGACGACATTTCCACAAACACCTTGTCTACAAACAGCTGCTTCTTC TGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGA GAGCTCTACTACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAA TTATGAGATCACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGA GCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGG CAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCC AACAACAAAAATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAA CCAAAATTCGACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGA GCTGATTGGAGAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACC ACCCAAATCAAAGGATGAGGGGAA



consensusID : consensus_15949#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 633
fasta sequence
                              [CAGCTTGCCACTTCNTGCACCAGTTTGTCCAGGNGNTGNTGTNNCGGCAGCGGGACGGCTTNGCNGATTCCTGTTGGACAGCNGCNGTTTTTCCTTCGGGTGGTCNGCGGCCACCACCACCCCNGCGGAGTCCCCGTCGGANGACCCCGCNGGGACAGGGANGAGGANGACATTTCCACAAACACNTTGTNTACAAACAGCTGCTTNTTCTGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTANTACTANTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATCACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTTTTTTNTGCTNGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATNTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTNGACACNGATTCGATCAGCGGGAGCNGATNTGTCGAAGAGGACGGAATCGAGNTG]

[-] EMBL BE229770             [CAGCTTGCCACTTCNTGCACCAGTTTGTCCAGGNGNTGNTGTNNCGGCAGCGGGACGGCTTNGCNGATTCCTGTTGGACAGCNGCNGTTTTTCCTTCGGGTGGTCNGCGGCCACCACCACCCCNGCGGAGTCCCCGTCGGANGACCCCGCNGGGACAGGGANGAGGANGACATTTCCACAAACACNTTGTNTACAAACAGCTGCTTNTTCTGCTGCTACGATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTANTACTANTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATCACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAAGCTCAGAGATTTTTTTTNTGCTNGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATNTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTNGACACNGATTCGATCAGCGGGAGCNGATNTGTCGAAGAGGACGGAATCGAGNTG]


>consensus_15949#2 CAGCTTGCCACTTCNTGCACCAGTTTGTCCAGGNGNTGNTGTNNCGGCAGCGGGACGGCT TNGCNGATTCCTGTTGGACAGCNGCNGTTTTTCCTTCGGGTGGTCNGCGGCCACCACCAC CCCNGCGGAGTCCCCGTCGGANGACCCCGCNGGGACAGGGANGAGGANGACATTTCCACA AACACNTTGTNTACAAACAGCTGCTTNTTCTGCTGCTACGATTATTTAATCAACCGAAGA AGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTANTACTANTAGTAACAATGGCGG ATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATCACATAAAACCAGTAGAGGAA GACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGGTGAGTGGCGATCTTCATAAA GCTCAGAGATTTTTTTTNTGCTNGCCTCGGCAAACCATGGCCAGCGAGCTCAACTCCTCC CTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAAATCACGATNTTTCTCACCAC CAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTNGACACNGATTCGATCAGCGGG AGCNGATNTGTCGAAGAGGACGGAATCGAGNTG



consensusID : consensus_15949#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 560
fasta sequence
                              [TTTTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATCACAA-GAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGG-ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTAC-TGGAGCATGTGC-G-CGGCGGCGGGGCAGGG-GATC-TGCCATGGCCGGAGCAGC-GG-GTCGTCGGGG-GGGCACTCCTCCTGGATGTCCATGGC-GACGCCGCTGAACTCCTCGACGAC-GC-GGAG-CACCTCGTTGACGCTGCGCAGNCTGTCAGCGATCCCTGTTCTGAA]

[-] EMBL CF302508             [TTTTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTGATGATCACAA GAGGAATTGATATAATGACATAGTTTATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AU184595             [                                                                                        TTTTTTTTTTTTTTACATNGATGACCACAA GAGGAATTGATATAATGACATAGTTTATNACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAANGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGNTTAGCTCAGAGCTCACTCTCCCATGGCGCGGGGTTCGTTCAGTAC TGGAGCATGTGC GCCGGCGGCGGGGCAGGG GATC TGCCATGGCCGGANCA                                                                                                                          ]
[+] EMBL BQ529300             [                                                                                              TTTTTTTTTTTTTTTTCATCACAAGGAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGGCACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGC                                                                                                                                                                                             ]
[-] EMBL BI808998             [                                                                                                    TTTTTTTTTTGATCACAA GAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTAC TGGAGCATGTGCTG CGG GGTGGGGCAGGGTGATCTTGCCATGGCCGGAGCAGCTGGTGTCGTCGGGGTGGGCACTCCTCCTGGATGTCCATGGCTGATGCCTGTGAACTCCTCGATGACTGCTGGAG CA CTCGTTGACGCTGCGCAG CTGTCAGCGATCCCTGTTCTGAA]
[-] EMBL AU101504             [                                                                                                        TTTTTTGATCACAA GAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTAC TGGAGCATNTGC G CGGCGGCGGGGCAGGG GATC TGCCATGGCCGGAGCAGC GG GTCGTCGGGG GGGCACTCCTCCTGGATGTCCATGGC GACGCCGCTGAACTCCTCGACGAC GC GGA  NACCTCGTTGACGCTGAGCA NCTGTCGCCGAgctcgg       ]
[-] EMBL AU181765             [                                                                                                        TTTTTTGATCACAA GAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTAC TGGAGCATGTGC G CGGCGGCGGGGCAGGG GATC TGCCATGGCCGGAGCAGC GG GTCGTCGGGG GGGCACTCCTCCTGGATGTCCATGGC GACGCCGCTGAACTCCTCGACGAC GC GGAG CACCTCGTTGACGCTGCGCAGCCTGTC                  ]
[-] EMBL CB681848             [                                                                                                                                                           ATAACACAGACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGTCCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTAC TGGAGCATGTGC G CGGCGGCGGGGCAGGG GATC TGCCATGGCCGGAGCAGC GG GTCGTCGGGG GGGCACTCCTCCTGGATGTCCATGGC GACGCCGCTGAACTCCTCGACGAC GG GGAG C                                            ]
[-] EMBL BM419987             [                                                                                                                                                    ttttttttTAACACAAACAACATAATTAACCCTTACAAAACACCACATGG ACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACGTGGAGCATGTGC G CGGCGGCGGGGCAGGG GATC TGCCATGGCCGGAGCAGC GG GTCGTCGGGG GGGCACTCCTCCTGGATGTCCATGGC GACGCCGCTGAACTCCTCGACGAC GC GGAGACACCTCGTTG                                   ]


>consensus_15949#3 TTTTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATCACAAGA GGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAATTAACCCT TACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAAAATCATCA TCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCA AAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCTTAGCTCAG AGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACTGGAGCATGTGCGCGGCGGCGGGG CAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCTGGATGTCC ATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGCGCAGNCTG TCAGCGATCCCTGTTCTGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15949#1      ------------------------------------------------------------
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      TCCTTTTTTTTTTTGATATAATGACATAGTTTATAACATTACATAACACAAACAACATAA 60
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ------------------------------------------------------------
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      TTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGACACAA 120
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ------------------------------------------------------------
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      AATCATCATCAGAAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGA 180
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ------------------------------------------------------------
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      AATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGCCAACCACAGCT 240
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ------------------------------------------------------------
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      TAGCTCAGAGCTCACTCTCCCATGGCGCGGCGTTCGTTCAGTACTGGAGCATGTGCGCGG 300
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ---------------------------------------------CGCAATTTTACATTG 15
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      CGGCGGGGCAGGGGATCTGCCATGGCCGGAGCAGCGGGTCGTCGGGGGGGCACTCCTCCT 360
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ATGATCACAAGAGGAATTGATATAATGACATAGTTTATAACATTACATAACACAAACAAC 75
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      GGATGTCCATGGCGACGCCGCTGAACTCCTCGACGACGCGGAGCACCTCGTTGACGCTGC 420
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ATAATTAACCCTTACAAAACACCACATGGACACAGACAAAAGACCATCACTTATTCAGAC 135
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      GCAGCCTGTCGCCGAGCTCGGCGGCGCGCGCCCGGAGCACCGTGTTCTCCTGCTCCACGC 480
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      ACAAAATCATCATCAGAAGAGTAGTAGAAGAAGACCATA---GAGCAGCAGCAGATTAAA 192
consensus_15949#2      ----------------------------------------------------------CA 2
consensus_15949#0      GCGCGTACTGCCCGGCGATTTCGCTGGCGCGCGCCAGCACGCGCGCGTTGTCCGCCTGCA 540
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      GCCT-TGAAATTCTCAAAGCAGCCAAGAGAAGAAAAAAGATGAAGACTTCTT-GATGCCA 250
consensus_15949#2      GCTT-GCCACTTCNTGCACCAGTTTGTCCAGGNGNTGNTGTNNCGGCAGCGG-GACG--- 57
consensus_15949#0      GCCTCGCCACCTCCTGCACCAGCTCGTCCAGGTGCTGCTGCTTCCGCAGCCGCGACC--- 597
consensus_15949#3      ----------------------TTTTTTTAAAAATTTTTTTTTTTTTTTTTT-------- 30
                                                    *                              

consensus_15949#1      ACCACAGCTTAGCTCAGAGCTCACTCTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGT 310
consensus_15949#2      ------GCTTNGCNGA----------TTCCTGTTGGACAGCNGCNGTTTTTCCTTCGGGT 101
consensus_15949#0      ------GCCTCGCCGA---------CTCCCTGTTCGACAGCCGCCGCTTCTCCCTCCGGT 642
consensus_15949#3      -------TTTTTTTTT----------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 73
                                *                *   * **             ** *   *    *

consensus_15949#1      GGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCG 370
consensus_15949#2      GGTCNGCGGCCACCACCACCCCNGCGGAGTCCCCGTCGGANGACCCCGCNGG-GACAGGG 160
consensus_15949#0      GGTCCGCCGCCACCACCACCCCCGCCGAGTCCCCGTCCGACGACCCCGCCGGCGACAGCG 702
consensus_15949#3      TTTTTTTTTTTTTTTTTTTTTTTTT----TTTTTTTTTTTTGATCACAAGAGGAATTGAT 129
                         *                          *     *     ** * *    *  *  *  

consensus_15949#1      ACGACGACGACATTTCCACAAACACCTTGTCTACAAACAGCTGCTTCTTCTGCTGCTACG 430
consensus_15949#2      ANGAGGANGACATTTCCACAAACACNTTGTNTACAAACAGCTGCTTNTTCTGCTGCTACG 220
consensus_15949#0      ACGACGACGACATTTCCACAAACACCTTGTCTACAAACAGCTGCTTCTTCTGCTGCTACG 762
consensus_15949#3      ATAATGACATAGTTTATAACATTACATA--ACACAAACAACATAATTAACCCTTACAA-- 185
                       *  * **     ***  *  *  ** *     ******* *    *   *   * * *  

consensus_15949#1      ATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACT 490
consensus_15949#2      ATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTANT 280
consensus_15949#0      ATTATTTAATCAACCGAAGAAGAACACGAAGAAGAAGAACAACAACAAGAGAGCTCTACT 822
consensus_15949#3      AACACCACATGGACACAGACAAAAGACCATCACTTATT-CAGACACAAAATCATCATCAG 244
                       *  *    **  **  *   * ** ** *  *   *   **   **** *      *   

consensus_15949#1      ACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATC 550
consensus_15949#2      ACTANTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATC 340
consensus_15949#0      ACTACTAGTAACAATGGCGGATTGACGCGGAGAAGATGATTCCCCCAGAATTATGAGATC 882
consensus_15949#3      AAGAGTAGTAGAAGAAGACCATAGAGCAGCAGCAGATTAAAGCCTTGAAATTCTCAAAGC 304
                       *  * *****  *   *   ** **   * ** **** *   **    **** * * * *

consensus_15949#1      ACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGG 610
consensus_15949#2      ACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGG 400
consensus_15949#0      ACATAAAACCAGTAGAGGAAGACAACCGAGAAGGAGTGGAGGAAGCAGGAGCGGCGCAGG 942
consensus_15949#3      A------GCCAAGAGAAGAAAAAAGATGAAGACTTCTTGATGC--CAACCACAGCTTAGC 356
                       *       ***  *** *** * *   **  *    * ** *   **    * **  ** 

consensus_15949#1      TGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGG 670
consensus_15949#2      TGAGTGGCGATCTTCATAAAGCTCAGAGATTTTTTTTNTGCTNGCCTCGGCAAACCATGG 460
consensus_15949#0      TGAGTGGCGATCTTCATAAAGCTCAGAGATTTCTTCTCTGCTCGCCTCGGCAAACCATGG 1002
consensus_15949#3      TCAGAGCTCACTCTCCCATGGCGCGGCG-TTCGTTCAGTACTGGAGCATGTGCGCGGCGG 415
                       * ** *   *   **  *  ** * * * **  **   * ** *     *    *   **

consensus_15949#1      CCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAA 730
consensus_15949#2      CCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAA 520
consensus_15949#0      CCAGCGAGCTCAACTCCTCCCTCCAGCGCAAACAATTCCTCCCAAATCCCAACAACAAAA 1062
consensus_15949#3      CGGGGCAGGGGATCTGCCATGGCCGGAGCAG-CGGGTCGTCGGGGGGGCACTCCTCCTGG 474
                       *  *  **   * ** *     ** * ***  *   ** **       *   *  *    

consensus_15949#1      ATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCG 790
consensus_15949#2      ATCACGATNTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTNG 580
consensus_15949#0      ATCACGATCTTTCTCACCACCAAGATCCAACCCAAGAACAGCAACCACAACCAAAATTCG 1122
consensus_15949#3      ATGTCCATGGCGA-CGCCGCTGAACTCC---TCGACGACGCGGAGCACCTCGTTGACGCT 530
                       **  * **      * ** *  *  ***    * *  **    * ***  *    *    

consensus_15949#1      ACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGA 850
consensus_15949#2      ACACNGATTCGATCAGCGGGAGCNGATNTG-TCGAAGAGGACGGAATCGAGNTG------ 633
consensus_15949#0      ACACCGATTCGATCAGCGGGAGCTGATCTGCTCGAAGAGGACGGAATCGAGCTGATTGGA 1182
consensus_15949#3      GCGCAGNCT--GTCAGCGATCCCTGTTCTGAA---------------------------- 560
                        * * *  *   ******    * * * **                              

consensus_15949#1      GAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA 910
consensus_15949#2      ------------------------------------------------------------
consensus_15949#0      GAAGAATTTGGGGGGAGAAATGGATCGAGAGATGGAGATGAATGGCAACCACCCAAATCA 1242
consensus_15949#3      ------------------------------------------------------------
                                                                                   

consensus_15949#1      AAGGATGAGGGGAA 924
consensus_15949#2      --------------
consensus_15949#0      --------------
consensus_15949#3      --------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)