These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1596#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3384 fasta sequence [CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGGTTCCCAGCGGACCGTTCATAACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACCTCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAGCCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTGCTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTAGCAAGGTTTTAGATAGACACCATGTCTGACGTCGCAAACTCGACTTCCCCCGCCCCGGAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAGGCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTCGGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGCCAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCCTATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACTGTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTGGGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCTATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTACGTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCACGGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGCTTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACTGAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAGGAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTCAACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTCACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGCTCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCTGAGAAGACCGAGGAGGGTGCCGAGGAGAAGAAGGATGAGAACAAGCCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAGAAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAGAACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTCCCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGCCGTGGTGCTGGTTTCCCTGGCGGTATGCCTCAGCAGGGTGGCCGTGGCGGTCCCAACGGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCATACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGCGGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCAATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGCATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGCGGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAGCAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTTGCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACCACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATACGCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAGAAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAACGGCAGCAAGTTATGATGGTTGCATGATTTCCTTGAATGGCGAATGGCGCACGGGTAACGGTTTTCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAAGTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGTTGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGACTAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCGGACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAGACGGGCACCCCGGGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGACTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCTACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGAATTTCGCACATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGGATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCATGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGAGAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATATAGCC] [+] EMBL AK119744 [CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGGTTCCCAGCGGACCGTTCATAACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACCTCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAGCCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTGCTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTAGCAAGGTTTTAGATAGACACCATGTCTGACGTCGCAAACTCGACTTCCCCCGCCCCGGAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAGGCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTCGGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGCCAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCCTATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACTGTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTGGGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCTATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTACGTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCACGGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGCTTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACTGAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAGGAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTCAACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTCACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGCTCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCTGAGAAGACCGAGGAGGGTGCCGAGGAGAAGAAGGATGAGAACAAGCCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAGAAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAGAACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTCCCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGCCGTGGTGCTGGTTTCCCTGGCGGTATGCCTCAGCAGGGTGGCCGTGGCGGTCCCAACGGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCATACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGCGGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCAATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGCATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGCGGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAGCAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTTGCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACCACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATACGCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAGAAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAACGGCAGCAAGTTATGATGGTTGCATGATTTCCTTGAATGGCGAATGGCGCACGGGTAACGGTTTTCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAAGTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGTTGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGACTAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCGGACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAGACGGGCACCCCGGGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGACTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCTACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGAATTTCGCACATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGGATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCATGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGAGAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATATAGCC] consensusID : consensus_1596#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3099 fasta sequence [ACCACCCAACTACACCCACCGCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATAACAGAAAAAGAAACAAAAAAATACAGAAAATCCTCAAAAGCCCCGACGACCGCCAACCCGCCCCTCGTCACCTACTGTCGCTTGCTCCTCGACAGTAACGCGACTTCTCCCTCACCAGTTCCGCATACACAAAAGCCGCGCGCTCGCCTGTGTGTCTCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACACTCTTCCGCAACTCGCCAGAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAGGACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAGGCCCCCACCCCCACCACCGCTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTCGGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGCCAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCATATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACCGTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTCGGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCCATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTACGTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCACGGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGTTTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACCGACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTCAATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTCACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGCGCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAGAAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAGGCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTTGGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAGAAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAGAACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTACCCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGACGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAATGCTCAGCAGATGCCCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCTGGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGCGGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAGATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGCGGTCCCGGCGGCCGTGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGTCCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAGCAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTGGCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACCTCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATACGTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAGAAGGCTTAATCTTGTCACAGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAAGGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTTCACGGTTTCTTTCTTACGCTAGGCGGACGGCTTTACGAATTCCCCCAAAAGTTCTCATGATTCCTCAAAGGCTGGGTCCACCTTCCTCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCGGCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTTCATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGGGCGGGTTCGCAATAGCCCTTGCAGAGATACCTCAAGCAGGTTGCCCATGGCCTGGCTTACGTTCAGTTAATTATGGCAGACGTATGGTGGATGTCGGACATGATTTATGTCTGAGAGATGTGGTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGGACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT] [+] EMBL AK110296 [ACCACCCAACTACACCCACCGCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATAACAGAAAAAGAAACAAAAAAATACAGAAAATCCTCAAAAGCCCCGACGACCGCCAACCCGCCCCTCGTCACCTACTGTCGCTTGCTCCTCGACAGTAACGCGACTTCTCCCTCACCAGTTCCGCATACACAAAAGCCGCGCGCTCGCCTGTGTGTCTCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACACTCTTCCGCAACTCGCCAGAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAGGACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAGGCCCCCACCCCCACCACCGCTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTCGGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGCCAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCATATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACCGTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTCGGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCCATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTACGTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCACGGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGTTTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACCGACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTCAATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTCACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGCGCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAGAAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAGGCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTTGGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAGAAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAGAACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTACCCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGACGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAATGCTCAGCAGATGCCCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCTGGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGCGGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAGATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGCGGTCCCGGCGGCCGTGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGTCCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAGCAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTGGCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACCTCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATACGTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAGAAGGCTTAATCTTGTCACAGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAAGGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTTCACGGTTTCTTTCTTACGCTAGGCGGACGGCTTTACGAATTCCCCCAAAAGTTCTCATGATTCCTCAAAGGCTGGGTCCACCTTCCTCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCGGCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTTCATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGGGCGGGTTCGCAATAGCCCTTGCAGAGATACCTCAAGCAGGTTGCCCATGGCCTGGCTTACGTTCAGTTAATTATGGCAGACGTATGGTGGATGTCGGACATGATTTATGTCTGAGAGATGTGGTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGGACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1596#0 -CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGG--TTCCCAGCGGACCGTTCATA 57 consensus_1596#1 ACCACCC-AACTACACCCACC-GCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATA 58 ****** *** **** **** ***** * **** * * * ************* **** consensus_1596#0 ACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACC 117 consensus_1596#1 ACAGAAAAAGAAACAAAAAAATACAGAAAAT--CCTCAAAAGCCCCGACGACCGCCAAC- 115 *** ************************** * ******** **** * *** consensus_1596#0 TCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAG 177 consensus_1596#1 -CCGCC-----CCTCGTCACC-TACTGTCGCTTGCTCCTCGACAG-TAACGCGACTTC-- 165 ***** * ***** * ******* *** * ****** ** * **** consensus_1596#0 CCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTG 237 consensus_1596#1 ---TCCCTCACCAGTTCCGCATACACAAAAG-----CCGCGCGCTCGC---CTGTGTGTC 214 *** **** ** ****** * ** * * *** * *** * ** consensus_1596#0 CTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTA 297 consensus_1596#1 TCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACA-CTCTT-CCGCAACTCGCC 272 * ** * * * * *** ************** ***** ****** consensus_1596#0 GCAAGGTTTTAGATAGACACCATGTCTG---ACGTCGCAAACTCGACTTCCCCCGCCCCG 354 consensus_1596#1 A-GAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAG 331 * * ***** *** ******* * * ** *** * * * **** ** * consensus_1596#0 GAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAG 414 consensus_1596#1 GACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAG 391 ** **** *** **** * * * *************************** ****** consensus_1596#0 GCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTC 474 consensus_1596#1 GCCCCCACCCCCACCACCG---CTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTC 448 ** ******** *** * * *** ** **** ******** ************ consensus_1596#0 GGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGC 534 consensus_1596#1 GGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGC 508 ** ************************** ******** *********** ***** *** consensus_1596#0 CAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCC 594 consensus_1596#1 CAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCA 568 ** ***** ** ******************** ** ***************** ***** consensus_1596#0 TATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACT 654 consensus_1596#1 TATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACC 628 ******************************** *********** ************** consensus_1596#0 GTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAG 714 consensus_1596#1 GTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAG 688 ** ************** ***************** ************************ consensus_1596#0 ACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTC 774 consensus_1596#1 ACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTC 748 ******** *********************** *************************** consensus_1596#0 CACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTG 834 consensus_1596#1 CACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTC 808 ***************** ** ******** * ************** ******** ** consensus_1596#0 GGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCT 894 consensus_1596#1 GGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCC 868 ** ******************** ******** ***** *********** ***** ** consensus_1596#0 ATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATC 954 consensus_1596#1 ATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATC 928 *********** ***** ****** **************** ****************** consensus_1596#0 CCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTAC 1014 consensus_1596#1 CCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTAC 988 ********************************* ************************** consensus_1596#0 GTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCAC 1074 consensus_1596#1 GTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCAC 1048 *********** ***** ** ***** ***** ******** ** *************** consensus_1596#0 GGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGC 1134 consensus_1596#1 GGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGT 1108 ** ******** ** ***** ******** ** ** ***** ******** ** ***** consensus_1596#0 TTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACT 1194 consensus_1596#1 TTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACC 1168 *************** ************ *** ********* * ** ******** consensus_1596#0 GAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAG 1254 consensus_1596#1 GACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAG 1228 ** *** ***************** ******** ***************** ****** consensus_1596#0 GAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTC 1314 consensus_1596#1 GAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTC 1288 *********************** ** ** ** *************************** consensus_1596#0 AACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTC 1374 consensus_1596#1 AATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTC 1348 ** ** ************ * ******** ***************** ***** ****** consensus_1596#0 ACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGC 1434 consensus_1596#1 ACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGC 1408 ***** ***** *********** ************** *********** ********* consensus_1596#0 TCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTC- 1493 consensus_1596#1 GCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAG 1468 ***** * ******* *** ***** ***** ******* ********* consensus_1596#0 --------TGAGAAGACCGAGGAGGG------TGCCGAGGAGAAGAAGGATGAGAACAAG 1539 consensus_1596#1 AAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAG 1528 **** ** ** **** ** ** **** **** ** ** * **** consensus_1596#0 CCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTC 1599 consensus_1596#1 GCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTT 1588 * ** ** ***************** *********** ** ** ************** consensus_1596#0 GGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAG 1659 consensus_1596#1 GGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAG 1648 ************************** ************** ** *********** *** consensus_1596#0 AAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAG 1719 consensus_1596#1 AAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAG 1708 ******** *********************** ** ************** * *** *** consensus_1596#0 AACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAG 1779 consensus_1596#1 AACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAG 1768 ******** ***** ********************************************* consensus_1596#0 CAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTC 1839 consensus_1596#1 CAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTAC 1828 ************* ** ** *********** ***** ** **************** * consensus_1596#0 CCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGC 1899 consensus_1596#1 CCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGA 1888 ** ****** *************** ***** ** ******** ** * ** ***** consensus_1596#0 CGTGGTGCTGGTTTCCCTGGCGGTATGCCT---CAGCAGGGTGGCCGTGGCGGTCCCAAC 1956 consensus_1596#1 CGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAAT 1948 *********** ***** ** ** ***** ******** ***** ** ******** consensus_1596#0 GGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCA 2016 consensus_1596#1 GCTCAGCAGATGC---CCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCT 2005 * ********** * *********** ** ** ******** ** ** ******** consensus_1596#0 ------TACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGC 2070 consensus_1596#1 GGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGC 2065 ************** ** ****** * ***** ** ** ** ************ consensus_1596#0 GGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCA 2130 consensus_1596#1 GGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAG 2125 ** * **** ** **** * *** **** * * ******** ***** ** * * consensus_1596#0 ATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGC 2190 consensus_1596#1 ATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGC 2185 *********** ** ********** ****** ** * *********** ** *** consensus_1596#0 ATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGC 2250 consensus_1596#1 GGTCCC---GGCGGCCG---TGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGT 2239 *** ******** ******* * *** ********* *** ******** ** consensus_1596#0 GGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAG 2310 consensus_1596#1 CCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAG 2299 *** * * ** * ** ** ********** * * ** ****** ********* consensus_1596#0 CAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTT 2370 consensus_1596#1 CAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTG 2359 ************** ******** *************** ***************** consensus_1596#0 GCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACC 2430 consensus_1596#1 GCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACC 2419 ***************** ******** ******************** ************ consensus_1596#0 ACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATAC 2490 consensus_1596#1 TCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATAC 2479 * ** ***** ***** ************** ************** ** ********* consensus_1596#0 GCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAG 2550 consensus_1596#1 GTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAG 2539 * ******************* **** ** * ******************** ** *** consensus_1596#0 AAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAAC 2610 consensus_1596#1 AAGGCTTAATCTTGTCAC-AGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAA 2598 ********* * * * * ********* ******* *** **** * *** *** ** consensus_1596#0 GGCAGCAAGTTATGATGGTTGCATGATTTC----CTTG-AATGGCGAATGGCGCACGGGT 2665 consensus_1596#1 GGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTT 2658 ****** * *** **** * * ** *** ************* **** * consensus_1596#0 AACGGTTT---TCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAA 2722 consensus_1596#1 CACGGTTTCTTTCTTACGCTAGGCGG-ACGGCTTT----ACGAATT-----CCCCCAAAA 2708 ******* *** *** * *** *** **** ** *** ********* consensus_1596#0 GTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGT 2782 consensus_1596#1 GTT-CTCATGATTC---------------CTCAAAGGCT-GGGTCCACCTTCC------- 2744 *** ** * ***** *** * ** * ** *** * consensus_1596#0 TGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGAC 2842 consensus_1596#1 ------------TCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCG---- 2788 * * * * * ** ** **** * **** *** *** consensus_1596#0 TAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCG 2902 consensus_1596#1 -------GCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTT------------------ 2823 ******* ** ** * ********** ** *** consensus_1596#0 GACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAG 2962 consensus_1596#1 --CATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGG 2881 ** ***** * * * ** * * * * * * * * * * consensus_1596#0 ACGGGCACCCCG-GGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGA 3021 consensus_1596#1 GCGGGTTCGCAATAGCCCTTGCAGAGATACCT-----CAAGCAGGTTGCCCATGGCCTGG 2936 **** * * * ** * *** * **** ** ** * consensus_1596#0 CTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCT 3081 consensus_1596#1 CTTACGTTCAGTTAATTATGGC---AGACGTATGGTGGATGTCGGACATGATTTATGTCT 2993 *** **** ** * * * ** * * ** * ** *** consensus_1596#0 ACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGA-ATTTCGCAC 3140 consensus_1596#1 GAGAGATGTG-------------GTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGG 3040 * * * * ***** * ** * ** ** * ** * consensus_1596#0 ATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGG 3200 consensus_1596#1 ACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT- 3099 * * **** ** * *** * * * ** * *** consensus_1596#0 ATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCA 3260 consensus_1596#1 ------------------------------------------------------------ consensus_1596#0 TGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGA 3320 consensus_1596#1 ------------------------------------------------------------ consensus_1596#0 GAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATAT 3380 consensus_1596#1 ------------------------------------------------------------ consensus_1596#0 AGCC 3384 consensus_1596#1 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||