cluster # 1597

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1597 cluster # 1597 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1597#0 length = 1412 sequences # 2
consensusID : consensus_1597#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1412
fasta sequence
                              [GTGTCATCCGACGTTTTGCATCTCATCTCCCCCGTTCACAGCACAGCCCAGGTGCACCTGCCACCTGCACAGTTTCGTCAACAGAGCCGGCCTCCCGTCGCTGCTCCCAACCGCTGACTCCCACTCGCCGCGATCCGATCGCCACCTGCCCTCCCCTCCCAGATCCGCCGCCGCGGAAACCTCACCGGCGCCGGCGACGCGAGGGCACCATGCCGGGCCTCCTCGAGTATTCCGCGGGCGGCCTGGGCCTCCTGGCGCTCGCGGCGCTCGAGTCCCTCCCGCTCCGCCCCCTCCTCCTCCCCGCCGCCGCGGCGTCGCACCTCCCGCGCCGCCTCGGCCTCGCCACGCCGCTGCACCTCCGCCACCTCCTCGCGGGGATCGTCTCCGCGCTCTTCCTCCTCTCCGCGCTCTTCTCCGCGCGACACCACCTCTCCCTCCCGACGCTCGCCGCCACCGCGCTGTTCCTCCTCTACGCGCTGGCCCCCCTCGCCCCGCTCCGCGCGCCGCTCCCGCTCCCCTTGCTCGACCTCGTCCTCGCCGCCGCGTTCGCGCAGGAGCTCCTGCTCTTCGCCCACCGCAGGCCCTCCACCGCCGCCGGGATCGAGAACCGGTACTTCGACCTCTTCCTCGTCCCCGTCGCCGTCTGCCTCGTCGCCACGCTACTCGCCGCGCACGACCCCGAGGCCGTGCCGCCCCGCCTCGCGCGCGCCGCGGGGCTGGCGCTGCAGGGCACATGGATGGTCCAGATGGGGTTCTCCTTCTTCACCAGCGCCGTCGCCCAGGGGTGCGCGCTCCACGCCCAGAGCCGCGTCGACTACACCATCAAGTGCCGCACCCACGACGACTACCACCGCGCGCGCTCCGCGGCCACGCTGCAGTTCAACGGCCACCTCGCGCTGCTCGTGCTCGCCGGCGCGGCGGCGTACGGCGCCGCCGTCTCAAGAAGAAACCAGCCGCCGAGCGGGTACAGGATGCTGAGCAAGGAGGTGCAGATGGAAGGGATGCCGCTGCATTCGCAGTTCACATTGGATTCAGACGAAGAGAAGGAAGATGAAAGGATCACCAATTCGGCAATGCCGGTGGCGAATGGATCGGGGTCGCATCACGAGATCACGGTGCAAACCTCTGATTCCAAGTGATGAGACTGTGAATTATGCGGCGATTTTTCGGTGTACAATAGCTCAGCCAAGGAGGATATCTGCCAAGCTAGCTGCAGGGTGTGTTTTCAGTATGATGTTCAGTTTTGATGCTTTATTACTTCAGAATTCACCATATATGTGCAGAGAATCAGATCTTGCTCAGTTTGATCTGCATACATCAAATTTAACTTGTGCATTAGATTTAGCTACTGTACAATATTGTAATGTTGTGATTTCAGATAGCACTTTCGGAAATAAAATTGACAGGACTTT]

[+] EMBL AK106064             [GTGTCATCCGACGTTTTGCATCTCATCTCCCCCGTTCACAGCACAGCCCAGGTGCACCTGCCACCTGCACAGTTTCGTCAACAGAGCCGGCCTCCCGTCGCTGCTCCCAACCGCTGACTCCCACTCGCCGCGATCCGATCGCCACCTGCCCTCCCCTCCCAGATCCGCCGCCGCGGAAACCTCACCGGCGCCGGCGACGCGAGGGCACCATGCCGGGCCTCCTCGAGTATTCCGCGGGCGGCCTGGGCCTCCTGGCGCTCGCGGCGCTCGAGTCCCTCCCGCTCCGCCCCCTCCTCCTCCCCGCCGCCGCGGCGTCGCACCTCCCGCGCCGCCTCGGCCTCGCCACGCCGCTGCACCTCCGCCACCTCCTCGCGGGGATCGTCTCCGCGCTCTTCCTCCTCTCCGCGCTCTTCTCCGCGCGACACCACCTCTCCCTCCCGACGCTCGCCGCCACCGCGCTGTTCCTCCTCTACGCGCTGGCCCCCCTCGCCCCGCTCCGCGCGCCGCTCCCGCTCCCCTTGCTCGACCTCGTCCTCGCCGCCGCGTTCGCGCAGGAGCTCCTGCTCTTCGCCCACCGCAGGCCCTCCACCGCCGCCGGGATCGAGAACCGGTACTTCGACCTCTTCCTCGTCCCCGTCGCCGTCTGCCTCGTCGCCACGCTACTCGCCGCGCACGACCCCGAGGCCGTGCCGCCCCGCCTCGCGCGCGCCGCGGGGCTGGCGCTGCAGGGCACATGGATGGTCCAGATGGGGTTCTCCTTCTTCACCAGCGCCGTCGCCCAGGGGTGCGCGCTCCACGCCCAGAGCCGCGTCGACTACACCATCAAGTGCCGCACCCACGACGACTACCACCGCGCGCGCTCCGCGGCCACGCTGCAGTTCAACGGCCACCTCGCGCTGCTCGTGCTCGCCGGCGCGGCGGCGTACGGCGCCGCCGTCTCAAGAAGAAACCAGCCGCCGAGCGGGTACAGGATGCTGAGCAAGGAGGTGCAGATGGAAGGGATGCCGCTGCATTCGCAGTTCACATTGGATTCAGACGAAGAGAAGGAAGATGAAAGGATCACCAATTCGGCAATGCCGGTGGCGAATGGATCGGGGTCGCATCACGAGATCACGGTGCAAACCTCTGATTCCAAGTGATGAGACTGTGAATTATGCGGCGATTTTTCGGTGTACAATAGCTCAGCCAAGGAGGATATCTGCCAAGCTAGCTGCAGGGTGTGTTTTCAGTATGATGTTCAGTTTTGATGCTTTATTACTTCAGAATTCACCATATATGTGCAGAGAATCAGATCTTGCTCAGTTTGATCTGCATACATCAAATTTAACTTGTGCATTAGATTTAGCTACTGTACAATATTGTAATGTTGTGATTTCAGATAGCACTTTCGGAAATAAAATTGACAGGACTTT]
[+] EMBL CA757244             [                                                                                                                                                                                                                                                                                                                                                                                                                                        CCACCTCTCCCTCCCGACGCTCGCCGCCACCGCGCTGTTCCTCCTCTACGCGCTGGCCCCCCTCGCCCCGCTCCGCGCGCCGCTCCCGCTCCCCTTGCTCGACCTCGTCCTCGCCGCCGCGTTCGCGCAGGAGCTCCTGCTCTTCGCCCACCGCAGGCCCTCCACCGCCGCCGGGATCGAGAACCGGTACTTCGACCTCTTCCTCGTCCCCGTCGCCGTCTGCCTCGTCGCCACGCTACTCGCCGCGCACGACCCCGAGGCCGCGCCGCCCCGCCTCGCGCGCGCCGCGGGGCTGGCGCTGCAGGGCACATGGATGGTCCAGATGGGGTTCTCCTTCTTCACCAGTGCCGTCGCCCAGGGGTGCGCGCTCCACGCCCAGAGCCGCGTCGACTACACCATCAAGTGCCGCACCCACGACGACTACCACCGCGCGCGCTCCGCGGCCACGCTGCAGTTCAACGGCCACCTCGCGCTGCTCGTGCTCGCCGGCGCGGCGGCGTACGGCGCCGCCGTCTCANGAAGAAACCAGCCGCCGAGCGGGTACAGGATGCTGAGCAAGGAGGTGCAGATGGAAGGGATGCCGCTGCATTCGCAGTTCACATTGGATTCAGACGAAGAGAAGGAAGATGAAAGGATCACCAATTCGGGAATGC                                                                                                                                                                                                                                                                                                                                               ]




>consensus_1597#0
GTGTCATCCGACGTTTTGCATCTCATCTCCCCCGTTCACAGCACAGCCCAGGTGCACCTG
CCACCTGCACAGTTTCGTCAACAGAGCCGGCCTCCCGTCGCTGCTCCCAACCGCTGACTC
CCACTCGCCGCGATCCGATCGCCACCTGCCCTCCCCTCCCAGATCCGCCGCCGCGGAAAC
CTCACCGGCGCCGGCGACGCGAGGGCACCATGCCGGGCCTCCTCGAGTATTCCGCGGGCG
GCCTGGGCCTCCTGGCGCTCGCGGCGCTCGAGTCCCTCCCGCTCCGCCCCCTCCTCCTCC
CCGCCGCCGCGGCGTCGCACCTCCCGCGCCGCCTCGGCCTCGCCACGCCGCTGCACCTCC
GCCACCTCCTCGCGGGGATCGTCTCCGCGCTCTTCCTCCTCTCCGCGCTCTTCTCCGCGC
GACACCACCTCTCCCTCCCGACGCTCGCCGCCACCGCGCTGTTCCTCCTCTACGCGCTGG
CCCCCCTCGCCCCGCTCCGCGCGCCGCTCCCGCTCCCCTTGCTCGACCTCGTCCTCGCCG
CCGCGTTCGCGCAGGAGCTCCTGCTCTTCGCCCACCGCAGGCCCTCCACCGCCGCCGGGA
TCGAGAACCGGTACTTCGACCTCTTCCTCGTCCCCGTCGCCGTCTGCCTCGTCGCCACGC
TACTCGCCGCGCACGACCCCGAGGCCGTGCCGCCCCGCCTCGCGCGCGCCGCGGGGCTGG
CGCTGCAGGGCACATGGATGGTCCAGATGGGGTTCTCCTTCTTCACCAGCGCCGTCGCCC
AGGGGTGCGCGCTCCACGCCCAGAGCCGCGTCGACTACACCATCAAGTGCCGCACCCACG
ACGACTACCACCGCGCGCGCTCCGCGGCCACGCTGCAGTTCAACGGCCACCTCGCGCTGC
TCGTGCTCGCCGGCGCGGCGGCGTACGGCGCCGCCGTCTCAAGAAGAAACCAGCCGCCGA
GCGGGTACAGGATGCTGAGCAAGGAGGTGCAGATGGAAGGGATGCCGCTGCATTCGCAGT
TCACATTGGATTCAGACGAAGAGAAGGAAGATGAAAGGATCACCAATTCGGCAATGCCGG
TGGCGAATGGATCGGGGTCGCATCACGAGATCACGGTGCAAACCTCTGATTCCAAGTGAT
GAGACTGTGAATTATGCGGCGATTTTTCGGTGTACAATAGCTCAGCCAAGGAGGATATCT
GCCAAGCTAGCTGCAGGGTGTGTTTTCAGTATGATGTTCAGTTTTGATGCTTTATTACTT
CAGAATTCACCATATATGTGCAGAGAATCAGATCTTGCTCAGTTTGATCTGCATACATCA
AATTTAACTTGTGCATTAGATTTAGCTACTGTACAATATTGTAATGTTGTGATTTCAGAT
AGCACTTTCGGAAATAAAATTGACAGGACTTT
clustalw multiple alignements is not computed in this case