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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15993#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1276 fasta sequence
[TTTTTTTTTTTTTTTTTGAAACTTAAACAACCATTAATAT-AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC-GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG-GGAGCTG-CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA-GGGAGGTTT-GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA-GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA-GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACA-GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGGGGAAAGTTTTTCTACTCCTTCAGTCCATGTCAG-GTCCAAGGGGAATTCG]
[+] EMBL CF281072 [TTTTTTTGGTTTTTTTTGAAACTTACACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTTTTTATTAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTGTTGTTTTTGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACA GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGAC ]
[+] EMBL CA760143 [ TTTTTTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACAGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAACAGGGAAACTGCACTAAGGCTACAAACTTCATGATGAAACCACACAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGTAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGGCTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTACATGGGATGAGCTGGTGGGAAACATAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGGGAAA GGGGGAGAGAAATCCTGCGAGACTTGATTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACCGGCAGAATTGCCGCCACCTCGCCAACG GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCA ]
[+] EMBL CF278966 [ TTTTTTTTTTGAAACTTAAACAATCATTAATATNAGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCTTTCAGCAGAGAAGGTGCACATTAACAG GGAGCTG CGGCAATGCCTTTATTAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTC ]
[+] EMBL CF277436 [ TTTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAAGGGGAGGTTTNGCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATC ]
[+] EMBL CF280784 [ TTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAAGGGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATAGGGAAGCACTCAAGC ]
[+] EMBL CF319628 [ TTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGA ]
[+] EMBL CF333071 [ TTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGA ]
[+] EMBL CF316540 [ TTTTTTGAGACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGA ]
[+] EMBL CF279460 [ TTTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACTGGCAGAATCG ]
[+] EMBL CF312174 [ TTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAGNGGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAAGGGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACAGGGCTGTCAAGCACCACGAGCAGCAAGCTCC ]
[+] EMBL CF335509 [ TTTTTGAAACTTAAACAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGA ]
[+] EMBL CF276118 [ CTTAAACAACCTTTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAAC ]
[-] EMBL AK071488 [ CAACCATTAATAT AGAGCGACAGAGTTCACGGGAATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACA GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGG ]
[+] EMBL CF330317 [ ttttttAAACCATCCGTTTCGAAAGAAC GGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGTGCACATCAACAG GGAGCTG CGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGCGTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAAAA GGGAGGTTT GCTGCTGAGCCGTAGATTTTGAGGGGGCATCACCGGACTCAGCAAGAGAAGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTTGCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAACCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAGAAA GGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATA GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACA GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGAC ]
[-] EMBL CF330316 [ TA GGAAGCACTCAAGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACA GGCTGTCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGACGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGGCGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGGGGAAAG TTTTCTACTCCTTCAGTCCA GTCAG GTCCAAGGGGAATTCG]
[-] EMBL CF333072 [ GTCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGGG ]
[-] EMBL CF278965 [ TCAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGGGGAAAGTTTTTCTACTCCTTCAGTCGATGTCAGTGTC ]
[-] EMBL CF276117 [ CAAGCACCACGAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACgg ]
[-] EMBL CF335508 [ GAGCAGCAAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCTCTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAG ]
[-] EMBL CF316541 [ GACGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGGCGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACg ]
[-] EMBL CF277437 [ CGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTAC GTA ]
[-] EMBL CF319629 [ CGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGATAGCCGGCNAAAGA CAGGGGAGGACAANCCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTG ]
[-] EMBL CF313019 [ CGAAGCCACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCG TGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACCGTAGAGGGAGGAGGGGGAACCAGAGAAGGG ]
[-] EMBL CF280785 [ CACTGACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAAGGGGAAAATCTTTCTACTCC TCAGTCCATGTCAG ]
[-] EMBL CF279461 [ CTGACACTGCCACAGGGAGCCAGCTTTTCCCGTCGATTCGTCGGGACGGCGACATCCCGGACACCGACGACGAAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACAAAGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAAATTAGCAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTG AGAGGAAAAAGGGGGAACCAGAGAAGG ]
[-] EMBL CF312173 [ AACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGA ]
consensusID : consensus_15993#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence
[GACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGAACATCCCGGACACCGACGACGANAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCANCCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAATTTCTACTCCTTCAGTCCA]
[-] EMBL CF281071 [GACACTGCCACAGGGAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGAACATCCCGGACACCGACGACGANAGCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCCGCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATCTCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCANCCCATGGAGCTCGCCGGCAAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGATTAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCCTCCAACCCTCGCTGGCGGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTACTGTAGAGGGAGGAGGGGGAACCAGAGAATTTCTACTCCTTCAGTCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15993#0 TTTTTTTTTTTTTTTTTGAAACTTAAACAACCATTAATATAGAGCGACAGAGTTCACGGG 60
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AATAAATCCCAGTACATTGCCAAACAGATAAAAAGGAAGCATAAAACCATCCGTTTCGAA 120
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AGAACGGGGAACTGCACTAAGGCTACAAACTTCATGATGAAACCACGCAGCAGAGAAGGT 180
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 GCACATCAACAGGGAGCTGCGGCAATGCCGCGACGAATGCAACCTTGGGCCTCCTTTGGC 240
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 GTGCAGCACGCTTGACAAACTGGTAATCCCCATCCGGTTGCCTCCACGAAGACTGCACAA 300
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AAGGGAGGTTTGCTGCTGAGCCGTAAATTTTGAGGGGGCATCACCGGACTCAGCAAGAGA 360
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AGTCCACGGAGTTCGTCGTTAAATCTGAGAAGCGTGAGCTCAACCCGAACAACAAACCTT 420
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 GCATGGAATGAGCTGGTGGGAAACACAGAGGAAGAAGGAGCCCACATCCAGATCCCCAAA 480
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 CCCACTGAAGAACTCGAATGGTGGCAAACAAACTGCTGTCTTCTTGGATCGACATGCGAG 540
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AAAGGGGGAGAGAAATCCTGCGAGACTTGACTGATGGAACCATGGTATAGGAAGCACTCA 600
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AGCATGCACTGGCAGAATCGCCGCCACCTCGCCAACAGGCTGTCAAGCACCACGAGCAGC 660
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 AAGCTCCGGGCGACAGCTTGCCCTGGCGAAGCAGGCCTCAAGAAGCTGCCGCCGCCGTCT 720
consensus_15993#1 ------------------------------------------------------------
consensus_15993#0 CTAGGAACGGGGCGGCGACCTCCCGGACACCGACGACGAAGCCACTGACACTGCCACAGG 780
consensus_15993#1 ----------------------------------------------GACACTGCCACAGG 14
**************
consensus_15993#0 GAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGA-CATCCCGGACACCGACGACGAA- 838
consensus_15993#1 GAGCCAGCTTTTTCCGTCGATTCGTCGGGACGGCGAACATCCCGGACACCGACGACGANA 74
************************************ *********************
consensus_15993#0 GCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCC 898
consensus_15993#1 GCAACTGGCACCGCCGCAAGGAGCCGGCTTCTCCCGGTCGCCGACGACGATGTAGCCGCC 134
************************************************************
consensus_15993#0 GCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATC 958
consensus_15993#1 GCCGCCGCAAGGAACCAGCCTTTTCCGTCGATTCATCCACCGGTCTTCGGATCTCGCATC 194
************************************************************
consensus_15993#0 TCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCACCC-ATGGAGCTCGCCGGC 1017
consensus_15993#1 TCCACCGCCACCAACCGCCGCCGCATCCGACCACACCGGCANCCCATGGAGCTCGCCGGC 254
***************************************** ** ***************
consensus_15993#0 AAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGAT 1077
consensus_15993#1 AAAAGACCAACTAGGGACAAACCCTAACTACAGGAGACACCTGACGACCTAATAACAGAT 314
************************************************************
consensus_15993#0 TAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCC-TCCAACCCTCGCTGGC 1136
consensus_15993#1 TAACAACCTAATACTAGTAGAGGGGAGGTGGCCGGACCCCTCCCTCCAACCCTCGCTGGC 374
******************************************* ****************
consensus_15993#0 GGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTA 1196
consensus_15993#1 GGCAAGCCACTGGAATCGAAGGGGAAGAGGGGCCGGTGAGGAGAGATTTTGGGGAGAGTA 434
************************************************************
consensus_15993#0 CTGTAGAGGGAGGAGGGGGAACCAGAGAAGGGGAAAGTTTTTCTACTCCTTCAGTCCATG 1256
consensus_15993#1 CTGTAGAGGGAGGAGGGGGAACCAGAGAA----------TTTCTACTCCTTCAGTCCA-- 482
***************************** *******************
consensus_15993#0 TCAGGTCCAAGGGGAATTCG 1276
consensus_15993#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||