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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16011#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2220 fasta sequence
[TATTATTTCACACTTTTCTGTCTCCAAGCTGTCCACAGTCCTCTTCCCACTGATGAGAGAGAGTTGCAAGAATTTGCAAGAAGCACCAAGAAAGTGTACCCAAAGAAGCATCTTCAGCTGCTCTCACCAGTCACCACTCCCATCCAAGAGATCCCAGCCTCTACTACAACAGCTTCCAACTTCCAAGAACCCATTTTTTTCCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA-AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC-GGCTTCTCTGGAAGTCAATG-TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACCGTA-GGGGATCCAAGCCAGACAAGTCATCACCAACAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCC-ATCTGTGCCAAGCTACATGGCT--CCCACA-AAATCTGCA-AG-AGCTAAGTTGCGCCTCCAAGGATC-TGCAGTGACCGATGGTGC-AGAGAC-ACC-A-CCGGAGAAAGT-AGCCTCT-GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA-AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA-AGGTGGAGGTGGTGAAGGACA-TTGCTGAGCCACCACAGCCA-GAGGCCTTGGTGATCAATGGTGGAAGCA-AGTGACTCATATGACA-AGTACCA-GGAGGGA-GCAATGGATTCTGCAGATATATTTCATCCAATGAA-CAAAGGTTTAAGATTATATATCA-GCTGTATGAGTTGCCGGCA-TTGTTTTT-CCA-GTTATAACCA-CA-TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA-GTCGATTCCA-TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA-AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTG-GAAAAAAAAAAGAAAAAAAAAAAA]
[+] EMBL AK065809 [TATTATTTCACACTTTTCTGTCTCCAAGCTGTCCACAGTCCTCTTCCCACTGATGAGAGAGAGTTGCAAGAATTTGCAAGAAGCACCAAGAAAGTGTACCCAAAGAAGCATCTTCAGCTGCTCTCACCAGTCACCACTCCCATCCAAGAGATCCCAGCCTCTACTACAACAGCTTCCAACTTCCAAGAACCCATTTTTTTCCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATG TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACCGTA GGGGATCCAAGCCAGACAAGTCATCACCAACAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAGCTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCC ATCTGTGCCAAGCTACATGGCT CCCACA AAATCTGCA AG AGCTAAGTTGCGCCTCCAAGGATC TGCAGTGACCGATGGTGC AGAGAC ACC A CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATT ]
[+] EMBL CB671139 [ AGTCCTCTTCCCACTGATGAGAGAGAGTTGCAAGAATTTGCAAGAAGCACCAAGAAAGTGTACCCAAAGAAGCATCTTCAGCTGCTCTCACCAGTCACCACTCCCATCCAAGAGATCCCAGCCTCTACTACAACAGCTTCCAACTTCCAAGAACCCATTTTTTTCCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATG TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGG ]
[+] EMBL CF277396 [ AGAACCCATTTTTTTCCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTCTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGAGGGGGGAAGTGGGTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATGTTTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAA ]
[+] EMBL CF278870 [ CCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAG AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATG TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAA ]
[+] EMBL OSS2136A [ TGCTCTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTTGAGCTGTCAAGAAGGTGTTCANNCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTTAGGAG AAATTAGCAGCTAGTAACCCGAACCCG CAAATCTAACCC ]
[+] EMBL AU056079 [ CTGGCTGGCTCTGGGCTGGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTCGGGCTTCTCTGGAAGTCAATG TTTCGGTGCCA ]
[+] EMBL CB671494 [ TGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACCACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCGATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATG TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGC ]
[+] EMBL AK105073 [ aAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGA AGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTC GGCTTCTCTGGAAGTCAATG TTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACCGTA GGGGATCCAAGCCAGACAAGTCATCACCAACAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCC ATCTGTGCCAAGCTACATGGCT CCCACA AAATCTGCA AG AGCTAAGTTGCGCCTCCAAGGATC TGCAGTGACCGATGGTGC AGAGAC ACC A CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGT ]
[+] EMBL OSS10831A [ AAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGNGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCANTTTCTGCTGAAACAGGAGCTGGAGAGTTTNAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTNCAGTAAGAAGGGAGAAGGCGCTCGCATATGCATTTTCACATCAGTTGAAGAGCACTTCAAGGTCAGTCA ]
[+] EMBL CA753591 [ GAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACCGTAGGGGGATCC AGCCAGACAAGTCATCACCACCAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCC TCAACTCCCTCCCCTAAAGTGTCA CGATCTTTGC AAGAAGAAATCCGCGACCCCG ]
[-] EMBL CB671140 [ CAAGCCAGACAAGTCATCACCAACAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCC ATCTGTGCCAAGCTACATGGCT CCCACA AAATCTGCA AG AGCTAAGTTGCGCCTCCAAGGATC TGCAGTGACCGATGGTGC AGAGAC ACC A CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTG GAAAAAAAAAGGA ]
[+] EMBL BI810220 [ cctccccCAAGCTCCCCAATCTGTCCCAAGCTACA GGCTCCCCCACACAAATCTCCACAGAACCTAAGTTGCGCCTCCAAGGATC TTCAGTGACCGATGGTGC AGAGAC ACC A CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGTGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACACTTGCTGAGCCACCACAGCCA GA GCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCACTTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAAAA ]
[+] EMBL BM418715 [ CCAAGGATCNTGCAGTGACCGATGGTGCTAGAGACTACCAA CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGTGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAAAAAA ]
[+] EMBL BI808101 [ GACCGATGGTGC AGAGAC ACC C CCGGAGAAAGTGAGCCTCTCGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCC AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCACAGGTGGAGGTGGTGAAGGACACTTGCTGAGCCCCCACAGCCACGAGGCCTTGGTGATCCATGGTGGAAGCACAGTGACTCATATGACACAGTACCACGGAGGGA GCCATGGATTCTGCAGATATATTTCATCCCATGAA CCAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCC TTGTTTTT CCA GTTATAACCC CC TTATTTGCTCTAGCAGATTCGCCAGTACCCAGCCC GTCGATTCCC TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACC AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTT AAAAAAAAAA ]
[+] EMBL BQ907690 [ GGTGC AGAGAC ACC ATCCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCACAGCTGGAATGGTGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCACAGGTGGAGGTGGTGAAGGACACTTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCCATGGTGGAAGCANAGTGACTCATATGACANAGTACCACGGAGGGA GCNATGGATTCTGCAGATATATTTCATCCCATGAACCCAAGGTTTAAGATTATATATCANGCTGTATGAGTTGCCGGCACTTGTTTTT CCACGTTATAACCACCACTTATTTGCTCTAGCAGATTCGC AGTACCCTGCCACGTCGATTCCACTTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACACAGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAAA ]
[+] EMBL BI808260 [ GAGAC ACC A CCGGAGAAAGT AGCCTCT GTTGGTTCAGTGAAGAAGAA CTGTCCTTCCA AGCTGGAATGGCACCACCTTCTCCGATGA GCCGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GA GCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGACGCAATGGATTCT CAGATATATTTCATCCCATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTT CCGGCA TTGTTTTTCCCA GTTATAACCC CC TTATTTGCTCTAGCAGATTCGCAAGTACCCAGCCC GTCGATTCCC TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACACAGTCTCTTCTATTTATGTGAGCCACATATTTCTTTT AAAAAAAAAA ]
[+] EMBL AU056080 [ CAGTGAAGAAGAAGCTGTCCTTCCA AGCTGGAATGGCNCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTAA AAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU108393 [ GATGAGGCGGCATTCGGGCCCTCCCA AGGTGGAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTNCCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGATTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTCTTCTATTTATGTGAGCCACATATTTCTTTT AAAAA ]
[-] EMBL CF278871 [ GAGGTGGTGAAGGACA TTGCTGAGCCACCACAGCCA GAGGCCTTGGTGATCAATGGTGGAAGCA AGTGACTCATATGACA AGTACCA GGAGGGA GCAATGGATTCTGCAGATATATTTCATCCAATGAA CAAAGGTTTAAGACTATATATCA GCTGTATGAGTTGCCGGCA TTGTTTTT CCA GTTATAACCA CA TTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCA GTCGATTCCA TTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACA AGTCTTTTCTATTTATGTGAGCCACATATTT TTTTTG GAAAAA ]
consensusID : consensus_16011#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1752 fasta sequence
[TGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGAAGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGG-CTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGAACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC-TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGA-TGGTGCAGAGACACCA-CCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCGTGCCAGTCGATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACAAGTCTCTTCTAAAAAAAAAAAAAAAAAAAACAAAAAATGCCGTTACGTAGCGTATC]
[+] EMBL AK066395 [TGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGAAGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGG CTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGA TGGTGCAGAGACACCA CCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCGTGCCAGTCGATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGT ]
[+] EMBL OSS3622A [ AAATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGAACTCTGCGTTGCATGCAGACTCTAGCACGGGTNCAGTCGCAGATACGTTCAAGGAGGCTGAAAATTTCAGAGGNGAc ]
[+] EMBL OSS3939A [ GCGTCAAGCTGCAA NACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCA CTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTNGGAGGGGCGTTCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGTTTG ATCTTNGAGAGGGTTAGATCACAAAAGC ]
[-] EMBL CF277397 [ ACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGA TGGTGCAGAGACACCACCCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCAGTCGATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACAAGTCTCTTCTAAAAAAAAAAAAAAAAAAAACAAAAAATGCCGTTACGTAGCGTATC]
[-] EMBL BI306174 [ CACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGA TGGTGCAGAGACACCA CCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTT ]
[-] EMBL BI306676 [ CACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGCTTCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGAGTGGTGCAGAGACACCA CCGGAGAAAGgtg ]
consensusID : consensus_16011#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 717 fasta sequence
[CGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCACCCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGCTCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGCAGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTTTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGTTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTTTAGCAGATTCGCAAGTACCCTGCCAGTCGATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAACCCTTTGGTGTTTGTATGTAAACAAGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAGATCCCTCTGAAGTCTGAACAGTGCAATCGCAATGGCAGAGTTTGTTGTATTGCCCAAAAAAAAAAACAAAAAAAGA]
[-] EMBL CB671495 [CGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCACCCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGCTCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGCAGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTTTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGTTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTTTAGCAGATTCGCAAGTACCCTGCCAGTCGATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAACCCTTTGGTGTTTGTATGTAAACAAGTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAGATCCCTCTGAAGTCTGAACAGTGCAATCGCAATGGCAGAGTTTGTTGTATTGCCCAAAAAAAAAAACAAAAAAAGA]
consensusID : consensus_16011#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence
[AAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAACGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTCTAAAAAAAAAAAAAAAAAATAAA]
[+] EMBL AU108444 [AAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAACGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGTTATAACCACATTATTTGCTCTAAAAAAAAAAAAAAAAAATAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TATTATTTCACACTTTTCTGTCTCCAAGCTGTCCACAGTCCTCTTCCCACTGATGAGAGA 60
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GAGTTGCAAGAATTTGCAAGAAGCACCAAGAAAGTGTACCCAAAGAAGCATCTTCAGCTG 120
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CTCTCACCAGTCACCACTCCCATCCAAGAGATCCCAGCCTCTACTACAACAGCTTCCAAC 180
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TTCCAAGAACCCATTTTTTTCCTTTCCTCCTCCTCCTCCTGCTCTGGCTGGCTCTGGGCT 240
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GGCCGTGCCCTCCTGTCAGTCCTAGCTCCAGCTAGAATCCCTCCTTGTTCATCCACCACC 300
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ACCATCCACATGATTGCATTTGTGCAGATTCCTGGAGAATTAAGCTGTCCTCTCATGCCG 360
consensus_16011#1 ------------------------------------------------------------
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ATCTGACACACCTTGTTGTTGTTGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATT 420
consensus_16011#1 ----------------------TGTTGCTGCTGGTTGCCGCACAACCGAAAGGGGGGATT 38
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCT 480
consensus_16011#1 ATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTTCTTCTGAGGGCT 98
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CCTCTAAGGATTTGGGAGGATGGGGAAGAAGGGGAAGTGGTTTGGAGCTGTCAAGAAGGT 540
consensus_16011#1 CCTCTAAGGATTTGGGAGGATGGGGAAGAAGGGGAAGTGGTTTGGAGCTGTCAAGAAGGT 158
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAG 600
consensus_16011#1 GTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAG 218
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCC 660
consensus_16011#1 TAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCC 278
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGA 720
consensus_16011#1 ACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGA 338
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGC 780
consensus_16011#1 GCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGC 398
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCA 840
consensus_16011#1 ACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCA 458
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAG 900
consensus_16011#1 GACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCGGGGGCTTGTCAG 518
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTG 960
consensus_16011#1 ATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAGAACTCTGCGTTG 578
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGA 1020
consensus_16011#1 CATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGA 638
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGAT 1080
consensus_16011#1 GGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGAT 698
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAG 1140
consensus_16011#1 GGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAG 758
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTG 1200
consensus_16011#1 CAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTG 818
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGG 1260
consensus_16011#1 GAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGG 878
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGA 1320
consensus_16011#1 ATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGA 938
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGG 1380
consensus_16011#1 CAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGG 998
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TGAGATCACAAAAGCCTTCAACCGTAGGGGATCCAAGCCAGACAAGTCATCACCAACAAC 1440
consensus_16011#1 TGAGATCACAAAAGCCTTCAAC-------------------------------------- 1020
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAACTCCCTCCGCTAAAGTGTC 1500
consensus_16011#1 ------------------------------------------TCCCTCCGCTAAAGTGTC 1038
consensus_16011#2 ------------------------------------------------------------
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 ACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGA 1560
consensus_16011#1 ACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGA 1098
consensus_16011#2 CGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCAC 60
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 CGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCAC 1620
consensus_16011#1 CGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCAC 1158
consensus_16011#2 GTCACCCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC 120
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC 1680
consensus_16011#1 GTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGC 1218
consensus_16011#2 TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGC 180
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGC 1740
consensus_16011#1 TCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGC 1278
consensus_16011#2 AGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA 240
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 AGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA 1800
consensus_16011#1 AGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCA 1338
consensus_16011#2 AGCTGGAATGGCGCCGCCTTTTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGT 300
consensus_16011#3 -------------------------------------------------AAGGTGGAGGT 11
consensus_16011#0 AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGT 1860
consensus_16011#1 AGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGT 1398
***********
consensus_16011#2 GGTGAAGGACATTGTTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAA 360
consensus_16011#3 GGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAA 71
consensus_16011#0 GGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAA 1920
consensus_16011#1 GGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAA 1458
************** *********************************************
consensus_16011#2 -GTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCA 419
consensus_16011#3 CGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCA 131
consensus_16011#0 -GTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCA 1979
consensus_16011#1 -GTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATATATTTCATCCA 1517
***********************************************************
consensus_16011#2 ATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGT 479
consensus_16011#3 ATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGT 191
consensus_16011#0 ATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGT 2039
consensus_16011#1 ATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATTGTTTTTCCAGT 1577
************************************************************
consensus_16011#2 TATAACCACATTATTTGCTTTAGCAGATTCGCAAGTACCCTGCCAGTCGATTCCATTTGT 539
consensus_16011#3 TATAACCACATTATTTGCTCTAAAAAAAAAAAAAAAAAATAAA----------------- 234
consensus_16011#0 TATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCAGTCGATTCCATTTGT 2099
consensus_16011#1 TATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCGTGCCAGTCGATTCCATTTGT 1637
******************* ** * * ** *
consensus_16011#2 TGTTTCTGTAAAACTATATCGATTTGTCACTTGAACCCTTTGGTGTTTGTATGTAAACAA 599
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 TGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACAA 2159
consensus_16011#1 TGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTGTATGTAAACAA 1697
consensus_16011#2 GTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGTGAAGATCCCTCTGAAGTCTGAA 659
consensus_16011#3 ------------------------------------------------------------
consensus_16011#0 GTCTCTTCTATTTATGTGAGCCACATATTTCTTTTTGGAAAAAAAAAAGAAAAAAAAAAA 2219
consensus_16011#1 GTCTCTTCTAAAAAAAAAAAAAAAAAAAAC--------AAAAAATGCCGTTACGTAGCGT 1749
consensus_16011#2 CAGTGCAATCGCAATGGCAGAGTTTGTTGTATTGCCCAAAAAAAAAAACAAAAAAAGA 717
consensus_16011#3 ----------------------------------------------------------
consensus_16011#0 A--------------------------------------------------------- 2220
consensus_16011#1 ATC------------------------------------------------------- 1752
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||