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Oryza sativa
cluster # 16019 cluster # 16019       Sequences # 27       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16019#0 length = 1621 sequences # 25  
consensus_16019#1 length = 1204 sequences # 1  
consensus_16019#2 length = 342 sequences # 1  

consensusID : consensus_16019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 1621
fasta sequence
                              [TAATCATCCCTGAAGAGCCAAAGAGTTTGTACGCTGCCCTTTGGCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA-GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG-TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT-TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT-AATTTATTACAGAC-TCTTGGTAGACCAAAAAAAAGATTTGCTCAATTATAAAAGAAAAA]

[+] EMBL AK068486             [TAATCATCCCTGAAGAGCCAAAGAGTTTGTACGCTGCCCTTTGGCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGG ATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGAT                                                                                                                ]
[+] EMBL CB669618             [                            GTACGCTGCCTTTTGGCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAATCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCACGAAGCTGCCAAGACCCACCGAGACAGAGGCCTACAACTTCTCCGTAAGAAAAAGTATAAGGAAGCATAAATGCAGGTGTCTGAAGCTATAAAAAGGAACCCGAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB666007             [                               CGCTGCCCTTTGGCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB656035             [                                           GCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCCACacac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB655998             [                                           GCCTCCATCCATCCATCCATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTANAGGTCTGGTTCAGATTGCGATGGCCAAATATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB651921             [                                                      tcccccttTGGGTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACTCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCATGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATCAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAACGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU068890             [                                                                 CTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCA CGCGAGGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACNGCGCTGGANGGGTCGCTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB662541             [                                                                   gCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGA GAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTANATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTANAGGTCTGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB659153             [                                                                                                                                               A GAACGATGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCTCCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCCAAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCCTAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB662542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGATGCAAATCGATGCATTGAGCTGGATGATACTTAGGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGACGTCT                                          ]
[+] EMBL OSC3971              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGCAAATNGATGCATTGAGCTGGATGATACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAGTTTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB655999             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGGATGATACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGACCAAAAAAAAGA                       ]
[-] EMBL CB651922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGATAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAAGGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTCT  TCAAGGTGTAAT AATTTATTAC                                                  ]
[-] EMBL CB659154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTTAGGGATGGGATATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGACCAg                               ]
[-] EMBL CB669619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGACC                                 ]
[-] EMBL CB673778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGATGGCCAAATATGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCAAGGTGTAAT AATTTATTACAGAC TCTTGGTgc                                    ]
[-] EMBL CB666008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGGATGCTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATGTTGTAAT AATTTATTACAGAC TCTTGGTAGACCAAAAAAAGGA                       ]
[-] EMBL CB656036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTATTGCAACTCTCGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGA                                   ]
[-] EMBL CB649572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCT                                          ]
[-] EMBL CB672550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCACACAATCTCAGTATTCATAACAGCCTAAGAGAATGTGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACATCTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGCCATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAACGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCACCATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGTTGATGGACACACCTAGGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGTTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTGTGTTACAAGCATCACCAAATCTGTTTTTTGTGTTAAGTAACGAAGTGAACAATTATGCTTTAATAACGAGCCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGCCCAAAGGGTAAT AATTTATTCCA                                                 ]
[-] EMBL CA762292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCACGCATTATAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGNCTAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGANCAAAGCACCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGGATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTGTGCTACAAGCATCACCAAAACTGTTTTTTTTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGACCAAAAAAAAa                        ]
[+] EMBL CA763973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCACCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAAGGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAATAAATTTATTACAGAC TCTTGG                                       ]
[+] EMBL AU068891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAG TTGAACAACTTAGNTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAGAGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCCTATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGT TGAACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAGACCAGTTGAAATGTTTGCTCAATTATAAAAGAAAAA]
[+] EMBL BI807157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATGACC ATGTGTGAACTTGAACACAAGAAACTCGTTCC AATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACAC ATATGATGCTACTTTTAACCTCTGCTACAAGCATCACC AAACTGTTTTTTGTGTTAAGTAACGAACTGAAC ACTATGCTTTAATAACGAACCATGATATAGCTTTTC ATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACC TTTTGTAAT AAaaa                                                       ]
[-] EMBL CA999626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAAT AATTTATTACAGAC TCTTGGTAG                                    ]


>consensus_16019#0 TAATCATCCCTGAAGAGCCAAAGAGTTTGTACGCTGCCCTTTGGCCTCCATCCATCCATC CATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGA GCGGAAGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCT GTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTC CTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGC GGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGA GAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTG CGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGG CAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGA GCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCT CCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCC AAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCC TAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATA TCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCT CGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATG TGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCA CCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAA GGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAGTTGA ACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAG AGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCC TATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGACACACCTACGAAGC TAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGTTGA ACTTGAACACAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCG CAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTT TTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTC AATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTA ATAATTTATTACAGACTCTTGGTAGACCAAAAAAAAGATTTGCTCAATTATAAAAGAAAA A



consensusID : consensus_16019#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1204
fasta sequence
                              [CTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGGTCAGTTCACTTCCAATCCCACACGCAATTCCGCGGAGAAAACCGCTCCGATTCACCTCGCCGCTCGCCGCCGGCGCGTTTCAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGTTTGTGACATTTTTATTTCTTCCTCTTCCCCTCTTGACGAACAACCACTAAATTCATCCCTAATCACACACACCATATATATTTAAATATGTAATTGTGCACATCGATCAACACACAGTATGTAATTGTGCACATCGATCAACACATCGTATGTAATTGTGAACATCGATCAATTTACTCTGTACCGATCACTGACGTTGTTCAGTTTCAAAAAATCATCTGACGTTGTTGATGTTGATTCAGTCGAGTCCACAATAGGATCAGGTACCCATCTATGTGGAAGAATCACGCGCACACACTGCTATGGAGTACTTGCCATCGCACATGCACGGATTTGTAGTCACCGGTAGTGAGTTACTACTCCATAAGCAGAGCAGCTGTCCTGCTCCCATCTGTCTGTTGTGCTCTTCTGTGAGTGTTTGGTGTAGTGTGTAGCGCTTTGCGCCAATGCTTCTTTCTCCTCAACGATCCTGTTGTTGATTCATGTAAAATTGTAAAATGTAATGCTTTCTCCACATCTTACTATAATCGGTCGGCATTCTTCCGCCATCCCAGCGGGGGAAAAAAACTGTAGTGCATTGCTAAAACACACACATA]

[+] EMBL AK108446             [CTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGAAGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGGTCAGTTCACTTCCAATCCCACACGCAATTCCGCGGAGAAAACCGCTCCGATTCACCTCGCCGCTCGCCGCCGGCGCGTTTCAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGTTTGTGACATTTTTATTTCTTCCTCTTCCCCTCTTGACGAACAACCACTAAATTCATCCCTAATCACACACACCATATATATTTAAATATGTAATTGTGCACATCGATCAACACACAGTATGTAATTGTGCACATCGATCAACACATCGTATGTAATTGTGAACATCGATCAATTTACTCTGTACCGATCACTGACGTTGTTCAGTTTCAAAAAATCATCTGACGTTGTTGATGTTGATTCAGTCGAGTCCACAATAGGATCAGGTACCCATCTATGTGGAAGAATCACGCGCACACACTGCTATGGAGTACTTGCCATCGCACATGCACGGATTTGTAGTCACCGGTAGTGAGTTACTACTCCATAAGCAGAGCAGCTGTCCTGCTCCCATCTGTCTGTTGTGCTCTTCTGTGAGTGTTTGGTGTAGTGTGTAGCGCTTTGCGCCAATGCTTCTTTCTCCTCAACGATCCTGTTGTTGATTCATGTAAAATTGTAAAATGTAATGCTTTCTCCACATCTTACTATAATCGGTCGGCATTCTTCCGCCATCCCAGCGGGGGAAAAAAACTGTAGTGCATTGCTAAAACACACACATA]


>consensus_16019#1 CTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGAGCGGA AGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCTGTACA AGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTCCTGCC TCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGGTCAGTTCACTTCCAATCCCAC ACGCAATTCCGCGGAGAAAACCGCTCCGATTCACCTCGCCGCTCGCCGCCGGCGCGTTTC AGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACG CGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGC TGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGT CGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGA ACAGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAG ACAGAGGTTTGTGACATTTTTATTTCTTCCTCTTCCCCTCTTGACGAACAACCACTAAAT TCATCCCTAATCACACACACCATATATATTTAAATATGTAATTGTGCACATCGATCAACA CACAGTATGTAATTGTGCACATCGATCAACACATCGTATGTAATTGTGAACATCGATCAA TTTACTCTGTACCGATCACTGACGTTGTTCAGTTTCAAAAAATCATCTGACGTTGTTGAT GTTGATTCAGTCGAGTCCACAATAGGATCAGGTACCCATCTATGTGGAAGAATCACGCGC ACACACTGCTATGGAGTACTTGCCATCGCACATGCACGGATTTGTAGTCACCGGTAGTGA GTTACTACTCCATAAGCAGAGCAGCTGTCCTGCTCCCATCTGTCTGTTGTGCTCTTCTGT GAGTGTTTGGTGTAGTGTGTAGCGCTTTGCGCCAATGCTTCTTTCTCCTCAACGATCCTG TTGTTGATTCATGTAAAATTGTAAAATGTAATGCTTTCTCCACATCTTACTATAATCGGT CGGCATTCTTCCGCCATCCCAGCGGGGGAAAAAAACTGTAGTGCATTGCTAAAACACACA CATA



consensusID : consensus_16019#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 342
fasta sequence
                              [GATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGTTGAACTTGAACNCAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACNCAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAATAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU078129             [GATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACATCACCAATTACCAATGTTGAACTTGAACNCAAGAAACTCGTTCCAAATCGGGCGCTGCGTTCTGCTATTGAGGAGTGTCGCAAATAACNCAATATGATGCTACTTTTAACCTCTGCTACAAGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAATTAAACTATGACCATTTTGTAATAAAAAAAAAAAAAAAAAAAA]


>consensus_16019#2 GATGGACACACCTACGAAGCTAAGTTTATCAGGGATTGGTTCCGCAGAGGCCATAACACA TCACCAATTACCAATGTTGAACTTGAACNCAAGAAACTCGTTCCAAATCGGGCGCTGCGT TCTGCTATTGAGGAGTGTCGCAAATAACNCAATATGATGCTACTTTTAACCTCTGCTACA AGCATCACCAAAACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAAC GAACCATGATATAGCTTTTCAATATGCAGATTCGGATTTGTAAACTGAGTTTGTGTGAAT TAAACTATGACCATTTTGTAATAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16019#0      TAATCATCCCTGAAGAGCCAAAGAGTTTGTACGCTGCCCTTTGGCCTCCATCCATCCATC 60
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      CATGGCTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGCGAAGGA 120
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      GCGGAAGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGAGGAGCT 180
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      GTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGACACCTC 240
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      CTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGTGCAAGGAGTGCGTGGC 300
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      GGACTGCGACGAGGCGTTGGGGAGGAGGAGGAGGAGGGACGCGCGCTGCGGCTGCGACGA 360
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      GAAGCTGGCCGCCGACGCGCTGTTCCTCAAGGCGCTGGCGCTGCTCAACCTCGCCGTCTG 420
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      CGCCGCGGATCACGAGCCGGCGATCACGGCGCTGGAGGGGTCGCTGGAGCTGCGCCCCGG 480
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      CAGCAAGGAGACGCGGGCTAAGCTGGACATGGCGAAGAGGAACAGGGACGCGTTTGCGGA 540
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      GCAGGAGCGGCTCGATCAGGAAGCTGCCAAGACCCACCGAGACAGAGGCCTAGAACTTCT 600
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      CCGTAAGAAAAAGTATAAGGAAGCAGAAATGCAGTTTTCTGAAGCTATAAAAAGGAACCC 660
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      AAGGTATCCCAAGAACTTCAGTGACAGAGCTCGATGCCTTGTCGAGCTAAATTCATTGCC 720
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      TAAGGCGCTTGAAGATGCAAATCGATGCATTGAGCTGGATGATACTTTAGGGATGGGATA 780
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      ------------------------------------------------------------
                                                                                   

consensus_16019#0      TCTCCGTAAAGGTCTGGTTCAGATTGCGATGGCCAAATATGAGGATGCTATTGCAACTCT 840
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      -----------CTCCCGTCGTCTCCCGCGGCGGCGGCGGCGGCGGGCGCGCGATGGGGGC 49
                                                                                   

consensus_16019#0      CGTAGACGGTTTGAAGCATGACCCACAAAATCTCAGTATTCATAACAGCCTAAGAGAATG 900
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      GAAGGAGCGGAAGGAGGCGGCGCAGCGCGAGAAGGAGGCCGGCGACGAGGCGTACGGCGA 109
                                                                                   

consensus_16019#0      TGCAGCACGCATTAAAATGGCTAAAGACAGTGATGCCATAGCAAAGGACTTGACGAAGCA 960
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      GGAGCTGTACAAGAGGGCCGCCGCCCACTATGCCGCCGCCGCCGACCTCGACCCCGGCGA 169
                                                                                   

consensus_16019#0      CCAAAGAGAAATAGAATGTCTGCATAAACAACTGAACGAAGGTGAGAACAAAGCATCCAA 1020
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      CACCTCCTGCCTCATCAAACGCGCCGCAGCCAACTTCAGCATGAACAAGGTCAGTTCACT 229
                                                                                   

consensus_16019#0      GGAGCGCTCAAGGCGGATGAAATCTGAAAAGCTGGTCAAGACATTGTCAAGCCAAGTTGA 1080
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      TCCAATCCCACACGCAATTCCGCGGAGAAAACCGCTCCGATTCACCTCGCCGCTCGCCGC 289
                                                                                   

consensus_16019#0      ACAACTTAGGTCAGCCAATGAGCGGAATGCAAATCTAGAACGCGAACTCTCAGAATGCAG 1140
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      CGGCGCGTTTCAGTGCAAGGAGTGCGTGGCGGACTGCGACGAGGCGTTGGGGAGGAGGAG 349
                                                                                   

consensus_16019#0      AGAGCGTTTTGAACGGCTTCAATTGATCCAAAACCGCATACTTCAACATTTCACCTGTCC 1200
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      GAGGAGGGACGCGCGCTGCGGCTGCGACGAGAAGCTGGCCGCCGACGCGCTGTTCCTCAA 409
                                                                                   

consensus_16019#0      TATATCTCATGAAGTCATGAATGATCCTCTTATGGCAGCTGATGGAC--ACACCTACGAA 1258
consensus_16019#2      ----------------------------------------GATGGAC--ACACCTACGAA 18
consensus_16019#1      GGCGCTGGCGCTGCTCAACCTCGCCGTCTGCGCCGCGGATCACGAGCCGGCGATCACGGC 469
                                                                * *  *   *    ***  

consensus_16019#0      GCTAAGTTTATCAG-GGATTGGTTCCGCAGAGGCCATAACACATCACC--AATTACCAAT 1315
consensus_16019#2      GCTAAGTTTATCAG-GGATTGGTTCCGCAGAGGCCATAACACATCACC--AATTACCAAT 75
consensus_16019#1      GCTGGAGGGGTCGCTGGAGCTGCGCCCCGGCAGCAAGGAGACGCGGGCTAAGCTGGACAT 529
                       ***       **   ***   *  ** * *  ** *  * **     *  *  *    **

consensus_16019#0      GTTGAACTTGAACACAAGAAACTCGTTC-CAAATCGGGCGCTGCGTTCT------GCTAT 1368
consensus_16019#2      GTTGAACTTGAACNCAAGAAACTCGTTC-CAAATCGGGCGCTGCGTTCT------GCTAT 128
consensus_16019#1      GGCGAAGAGGAAC---AGGGACGCGTTTGCGGAGCAGGAGCGGCTCGATCAGGAAGCTGC 586
                       *  ***   ****   **  ** ****  *  * * ** ** **    *      ***  

consensus_16019#0      TGAGGAGTGTCGCAAATAACACAATATGATGCTACTTTTAACCTCTGCTACAAGCATCAC 1428
consensus_16019#2      TGAGGAGTGTCGCAAATAACNCAATATGATGCTACTTTTAACCTCTGCTACAAGCATCAC 188
consensus_16019#1      CAAGACCCACCG-AGACAGAGGTTTGTGACATTTTTATTTCTTCCTCTTCCCCTCTTGAC 645
                         **      ** * * *      * ***   *  * **     **  * *   * * **

consensus_16019#0      CAA-AACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCAT 1487
consensus_16019#2      CAA-AACTGTTTTTTGTGTTAAGTAACGAACTGAACAACTATGCTTTAATAACGAACCAT 247
consensus_16019#1      GAACAACCACTAAATTCATCCCTAATCACACACACCATATATATTTAAATATGTAATTGT 705
                        ** ***   *   *   *     * *  **  * **  ***  ** ****   **   *

consensus_16019#0      G-ATATAGCTT----TTCAATATGCAG--ATTCGGATTTGTAAACTGAGTTTGTGTGAAT 1540
consensus_16019#2      G-ATATAGCTT----TTCAATATGCAG--ATTCGGATTTGTAAACTGAGTTTGTGTGAAT 300
consensus_16019#1      GCACATCGATCAACACACAGTATGTAATTGTGCACATCGATCAACACATCGTATGTAATT 765
                       * * ** * *       ** **** *    * *  **   * ***  *   * *** * *

consensus_16019#0      -TAAACTATGACCATTTTGTAATA-ATTTATTACAGACTCTTGGTAGACCAAAAAAAAGA 1598
consensus_16019#2      -TAAACTATGACCATTTTGTAATA-A------AAAAA--------AAAAAAAAAAAAA-- 342
consensus_16019#1      GTGAACATCGATCAATTTACTCTGTACCGATCACTGACGTTGTTCAGTTTCAAAAAATCA 825
                        * ***   ** ** ***    *  *      *   *        *     ******   

consensus_16019#0      TTTGCTCAATTATAAAAGAAAAA------------------------------------- 1621
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      TCTGACGTTGTTGATGTTGATTCAGTCGAGTCCACAATAGGATCAGGTACCCATCTATGT 885
                                                                                   

consensus_16019#0      ------------------------------------------------------------
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      GGAAGAATCACGCGCACACACTGCTATGGAGTACTTGCCATCGCACATGCACGGATTTGT 945
                                                                                   

consensus_16019#0      ------------------------------------------------------------
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      AGTCACCGGTAGTGAGTTACTACTCCATAAGCAGAGCAGCTGTCCTGCTCCCATCTGTCT 1005
                                                                                   

consensus_16019#0      ------------------------------------------------------------
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      GTTGTGCTCTTCTGTGAGTGTTTGGTGTAGTGTGTAGCGCTTTGCGCCAATGCTTCTTTC 1065
                                                                                   

consensus_16019#0      ------------------------------------------------------------
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      TCCTCAACGATCCTGTTGTTGATTCATGTAAAATTGTAAAATGTAATGCTTTCTCCACAT 1125
                                                                                   

consensus_16019#0      ------------------------------------------------------------
consensus_16019#2      ------------------------------------------------------------
consensus_16019#1      CTTACTATAATCGGTCGGCATTCTTCCGCCATCCCAGCGGGGGAAAAAAACTGTAGTGCA 1185
                                                                                   

consensus_16019#0      -------------------
consensus_16019#2      -------------------
consensus_16019#1      TTGCTAAAACACACACATA 1204
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)