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Oryza sativa
cluster # 16032 cluster # 16032       Sequences # 27       consensus # 8


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16032#0 length = 873 sequences # 14  
consensus_16032#1 length = 784 sequences # 5  
consensus_16032#2 length = 770 sequences # 1  
consensus_16032#3 length = 709 sequences # 1  
consensus_16032#4 length = 632 sequences # 2  
consensus_16032#5 length = 427 sequences # 2  
consensus_16032#6 length = 368 sequences # 1  
consensus_16032#7 length = 326 sequences # 1  

consensusID : consensus_16032#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 873
fasta sequence
                              [CATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTTAAGAATAGAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC-CTCTACAGCTGC-GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC-GAACACATATTGTT-CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA-CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG-TTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGGACG]

[-] EMBL AK121813             [CATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGAT  TCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG TTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGG   ]
[+] EMBL BU673602             [                                  ATATAGTTAAGAATAGAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCTCTCTACAGCTGCNCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGGAACACATATTGTTCCGTCATGCTACTGNCGAAGAAGCCACAGTTGTTTACCACACAATATTGGGGCCT CGGTGTGTGGACAGTCTCCTCAGA TCA TTTTCCAGCTTTCTTGTGCCA TGCTA CGGCA GCTG                                                                                                                                         ]
[+] EMBL BU673053             [                                  ATATAGTTAAGAATAGAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC CGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCA TTTTCCAGCTTTCTTGTG CATTGGTAa                                                                                                                                                   ]
[-] EMBL CF303298             [                                                                                                                                                                                  TTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTG GGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCT                                                                                                                                                     ]
[-] EMBL CF318768             [                                                                                                                                                                                                                                                 CTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGTCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATACTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG T                                                     ]
[-] EMBL CA758713             [                                                                                                                                                                                                                                                     tgGATCTTCTCGGCTATCACAACAGGATTCTGCTCGGCAATCTGATCCCGGCCGGCCTTC TGTAGTCGAAGGGCCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG TTTTTTTGGG                                            ]
[-] EMBL AU161692             [                                                                                                                                                                                                                                                                GGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATACTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTG                                                                                                                                                                                                                                    ]
[+] EMBL CB678805             [                                                                                                                                                                                                                                                                                          nAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGGGTGGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGGAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATA                                                                                                                                                                                                                      ]
[-] EMBL CF320423             [                                                                                                                                                                                                                                                                                                                                CAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCGTTTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGGA  ]
[-] EMBL CF308491             [                                                                                                                                                                                                                                                                                                                                CAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG TTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGGACG]
[+] EMBL CB964640             [                                                                                                                                                                                                                                                                                                                                                                                 ATCGGCACTGGAAGCCAGTCAGA CAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC CGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA                                                                                                     ]
[+] EMBL CB966245             [                                                                                                                                                                                                                                                                                                                                                                                 ATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC CGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA                                                                                                     ]
[+] EMBL CB965357             [                                                                                                                                                                                                                                                                                                                                                                                  TCGGCACTGGAAGCCAGTCAGACC ACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC CGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTGCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA                                                                                                     ]
[-] EMBL CF324323             [                                                                                                                                                                                                                                                                                                                                                                                                        CCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATC CTCTACAGCTGC GGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTC GAACACATATTGTT CGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTA CACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCG TTTTTTTGGGGGGGACGACGACGAGG                            ]


>consensus_16032#0 CATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTTAAGAATAGAATATATATT TACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACAC AATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTT GAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGA TCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGG CCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGG TACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATC GGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAG GAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATG CCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACT TCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATA TTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCA TTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGAGGATTCT CTCTCTCTCTCTCTATCTCGCTTTCTCTCTCTCTTCGCGTTTTTTTGGGGGGGACGACGA CGAGGCTGAGGGAGGGGAAGGTGGAGGAGGACG



consensusID : consensus_16032#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 784
fasta sequence
                              [CGAAGGATGAAAATACTTCATCAAGGCTTTTTTTATAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGC-ATCGGTTGC--TGGGTGGCTTTGGAGG--CTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGG-GGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGT]

[+] EMBL CB679840             [CGAAGGATGAAAATACTTCATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGC ATCGGTTGC  TGGGTGGCTTTGGAGG  CTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGG GGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCG                                     ]
[-] EMBL AY282740             [                           TTTTTTTTTAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGC ATCGGTTGC  TGGGTGGCTTTGGAGG  CTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGG GGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTG                                                 ]
[-] EMBL AU161693             [                           TTTTTTTTTAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGC ATCGGTTGC  TGGGTGGCTTTGGAGG  CTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGG GGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATACTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTT                                                                                                                        ]
[+] EMBL CF318769             [                         ttTTTTTTTATAAGCAATAAGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCNATCGGTTGCNNTGGGTGGCTTTGGAGGGNCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACT CTGGNGGCAGTCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCG ACACATATTGTTCGTCATG                                                                                                                                               ]
[+] EMBL CB678806             [                                     gatttcAAGACGGAGATCTACCTAACAATCCCTTATATATTTCCATTATTATTCCTTAATTGCCAAAGAATGAAACCATGATAAGGAGGAAGGATAGACACGATTGGGACTCCTAGAACACTAACCCGCACCTGAAGGAACCTACGGGGTGAAGCAAACTTGAACACTCTGTTGCCTCCCTGAATACAAATT GATGGCCCTTCCGTAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGC ATCGGTTGC  TGGGTGGCTTTGGAGG  CTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGG GGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGT]


>consensus_16032#1 CGAAGGATGAAAATACTTCATCAAGGCTTTTTTTATAAGCAATAAGATGGAAATATAGTT AAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATA AGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCT ACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTT CCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGG CAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCGGTATAAC GGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCT TACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTAT CCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAG ACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCA CAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCAC AGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTT TCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAA ATGT



consensusID : consensus_16032#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 770
fasta sequence
                              [AGAGCATCGAGGCTGTAACACCCTTAAAGGGGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGCCACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGGGCAGTCGTGAGCTTCGGTATAACGGGGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGT]

[+] EMBL CB632698             [AGAGCATCGAGGCTGTAACACCCTTAAAGGGGATGGAAATATAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGCCACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCGAAGGGGCAGTCGTGAGCTTCGGTATAACGGGGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGT]


>consensus_16032#2 AGAGCATCGAGGCTGTAACACCCTTAAAGGGGATGGAAATATAGTTAAGAATATAATATA TATTTACATTATTATTCCTTAATTGCCAGAGAATGCCACCATGATAAGGAGGAAGGATAG ACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAA ACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAAT CAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGG CCGGCCTTCTTGTAGTCGAAGGGGCAGTCGTGAGCTTCGGTATAACGGGGTGTTGAGCAA AAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGACCAACCTTCTTACGGCATGACAGG CATCGGTTGCTGGGTGGCTTTGGAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCG GCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCGTA AATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAG CACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACAC AATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGT GCCATTGCTACCGGCAGGCTGTACGTGCAAAACAAATTATGAGTAAATGT



consensusID : consensus_16032#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 709
fasta sequence
                              [CCGGTCAGGAAAAGTCCCGTGCCCTTCTCGCCTCGCAGGTTGGTGCGCCCCTCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGAAACACAATTGGGACTCCTAACACACTAACCCAAACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAAACTCGGTTGCCACCATGAATAAAAATTAAATGGCCCTTCCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCAAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAAACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGAAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCAAAAACAATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCAAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAAACTCATTTTTCCAGCTTTTTTGTGCC]

[+] EMBL CB632697             [CCGGTCAGGAAAAGTCCCGTGCCCTTCTCGCCTCGCAGGTTGGTGCGCCCCTCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGAAACACAATTGGGACTCCTAACACACTAACCCAAACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAAACTCGGTTGCCACCATGAATAAAAATTAAATGGCCCTTCCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTAGTCAAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAAACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGAAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCAAAAACAATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCAAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAAACTCATTTTTCCAGCTTTTTTGTGCC]


>consensus_16032#3 CCGGTCAGGAAAAGTCCCGTGCCCTTCTCGCCTCGCAGGTTGGTGCGCCCCTCTCCTCGT TCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGAAACACAATTGGGACT CCTAACACACTAACCCAAACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAAACTCGG TTGCCACCATGAATAAAAATTAAATGGCCCTTCCATAACCTTCAATCAAATCTTGTTGAT CTTCTCGGCTATCACAACAGGATTCTGCTTGGCAATCTGATCCCGGCCGGCCTTCTTGTA GTCAAAGGTGCAGTCGTGAGCTTCGGTATAACGGTGTGTTGAGCAAAAGGTACCTCCGCA TCGGCACTGGAAGCCAGTCAAACCAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGG TGGCTTTGAAGGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATC TGGCTTTGCTGGCTCCAATGGTGTCTTCAAAAACAATGCTGGCGTAAATGCCTTCTTCTC CACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCAAACACAT ATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTC CGGTGTGTGGACAGTCTCCTCAAACTCATTTTTCCAGCTTTTTTGTGCC



consensusID : consensus_16032#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 632
fasta sequence
                              [TCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGGCGGTGGCCGATCTGAGCCATCCGCCACCGCGGGTTCGTCGGGTGGTTGGCTTGATTTTTTTTATTTTTTTGGGGTTTTTTTTTGGGGGGAGGGGGTTATTGGGAGATCGGGATGGGTGTGGTTGGATCTGTGATTGTTGTTGTTGTTGTTGATAGGGGTTGCTTGCTTGCGATTTGATTGTGTGTTCGGAGGTTGACCTTATGGTTATCGATTTTGCTGTGATTTGATTGCTTCCAAATTTGCTGCGATTTGATTTGATTCTAAGATGTAGTCATGTAGGGGAGATGATTTTTTTTTTTTTACTTTTTGAGCCAATCAGCATAGGGAGGAGTGGGAGACATAGAATTCTCTCGCTTATGAGGAAAATTGGATGTGGCATGTTGCTCCCAGCCTTATCTCAATCGTGTGAACCTCCATGAGAGGTGAGGGAAGCTACGCCAACGATTGATACACGGTTTCTGTGTGCTTTGCCTTTGCGCGGAGATTGATAAAGGATTAAAGGGATCAACCTTTCTTGCCGTGCATGGCAAATCAGCGATTGATTATATTCTGGGGGGATAGCGCCATGGGATTTCTTG]

[+] EMBL AK062924             [TCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGGCGGTGGCCGATCTGAGCCATCCGCCACCGCGGGTTCGTCGGGTGGTTGGCTTGATTTTTTTTATTTTTTTGGGGTTTTTTTTTGGGGGGAGGGGGTTATTGGGAGATCGGGATGGGTGTGGTTGGATCTGTGATTGTTGTTGTTGTTGTTGATAGGGGTTGCTTGCTTGCGATTTGATTGTGTGTTCGGAGGTTGACCTTATGGTTATCGATTTTGCTGTGATTTGATTGCTTCCAAATTTGCTGCGATTTGATTTGATTCTAAGATGTAGTCATGTAGGGGAGATGATTTTTTTTTTTTTACTTTTTGAGCCAATCAGCATAGGGAGGAGTGGGAGACATAGAATTCTCTCGCTTATGAGGAAAATTGGATGTGGCATGTTGCTCCCAGCCTTATCTCAATCGTGTGAACCTCCATGAGAGGTGAGGGAAGCTACGCCAACGATTGATACACGGTTTCTGTGTGCTTTGCCTTTGCGCGGAGATTGATAAAGGATTAAAGGGATCAACCTTTCTTGCCGTGCATGGCAAATCAGCGATTGATTATATTCTGGGGGGATAGCGCCATGGGATTTCTTG]
[+] EMBL AU163645             [                                                                                                                                                                 CGGGATGGGTGTGGTTGGATCTGTGATTGTTGTTGTTGTTGTTGATAGGGGTTGCTTGCTTGCGATTTGATTGTGTGTTCGGAGGTTGACCTTATGGTTATCGATTTTGCTGTGATTTGATTGCTTCCAAATTTGCTGCGATTTGATTTGATTCTAAGATGTAGTCATGTAGGGGAGATGA  TTTTTTTTTTTACTTTTTGAGCCAATCAGCATAGGGAGGAGTGGGAGACATAGAATTCTCTCGCTTATGAGGAAAATTGGATGTGGCATGTTGCTCCCAGCCTTATCTCAATCGTGTGAACCTCCATGAGAGGTGAGGGAAGCTACGCCAACGATTGA                                                                                                                                  ]


>consensus_16032#4 TCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGCGGTGGCGGTGGCGGTGG CCGATCTGAGCCATCCGCCACCGCGGGTTCGTCGGGTGGTTGGCTTGATTTTTTTTATTT TTTTGGGGTTTTTTTTTGGGGGGAGGGGGTTATTGGGAGATCGGGATGGGTGTGGTTGGA TCTGTGATTGTTGTTGTTGTTGTTGATAGGGGTTGCTTGCTTGCGATTTGATTGTGTGTT CGGAGGTTGACCTTATGGTTATCGATTTTGCTGTGATTTGATTGCTTCCAAATTTGCTGC GATTTGATTTGATTCTAAGATGTAGTCATGTAGGGGAGATGATTTTTTTTTTTTTACTTT TTGAGCCAATCAGCATAGGGAGGAGTGGGAGACATAGAATTCTCTCGCTTATGAGGAAAA TTGGATGTGGCATGTTGCTCCCAGCCTTATCTCAATCGTGTGAACCTCCATGAGAGGTGA GGGAAGCTACGCCAACGATTGATACACGGTTTCTGTGTGCTTTGCCTTTGCGCGGAGATT GATAAAGGATTAAAGGGATCAACCTTTCTTGCCGTGCATGGCAAATCAGCGATTGATTAT ATTCTGGGGGGATAGCGCCATGGGATTTCTTG



consensusID : consensus_16032#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 427
fasta sequence
                              [TACCTCCTAAGGGAATA-C--GGTACTCCGCATCGG-AC-GGAAGCCAGTCAGACA--CTTCTTACGGCATGACAGGCATCGGTGCTGGGTGGCTTTGGAGCGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA]

[+] EMBL CB966850             [TACCTCCTAAGGGAATA C  GGTACTCCGCATCGG AC GGAAGCCAGTCAGACA  CTTCTTACGGCATGACAGGCATCGGTGCTGGGTGGCTTTGGAGCGCTCCTGTGCCGCTTGCTTATCCTCTACAGCTGCCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA]
[+] EMBL BU673578             [         AGGGAATAGCTTGGTACTCCGCATCGGCACTGGAAGCCAGTCAGACAACCTTCTTACGGCATGACAGGCATCGGTGCTGGGTGGC TTGGAG GCTCCTGTGCCGC TGCTTATCCTCTACAGCTGCCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCTCACCGGA]


>consensus_16032#5 TACCTCCTAAGGGAATACGGTACTCCGCATCGGACGGAAGCCAGTCAGACACTTCTTACG GCATGACAGGCATCGGTGCTGGGTGGCTTTGGAGCGCTCCTGTGCCGCTTGCTTATCCTC TACAGCTGCCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGTGTCTTCGAAGACGA TGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTCGTGACCTTCACAAA GTCCCTGTAGCACTTCGAACACATATTGTTCGTCATGCTACTGCCGAAGAAGCCACAGTT GTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCTCAGACTCATTTTTCCA GCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGGGCACGGGACTTTTCCT CACCGGA



consensusID : consensus_16032#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 368
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAAACATTAAGGGTGTAACAATAACCAATAAAAAGGAAATATAGTTAAAAATATAAAATTTTTTTACATTTTTTTTCCTTAATTGCCCAAAAATTTTTTTTTTTTAAGGGGGAAGGGTTAACCCAATTGGGACTCCTAACCCACTAACCCAAACCTGAAGGAACCTACTGGCTGAAAAAAACTTGAAAACCCGGTTGCCACCATAAAAAAAAAATAAAGGGCCCTTCCATAACCTTAAAAAAAAATTTGGGGAACTTTTCGGCTATCAAAACAGGATTTTGTTTGGAAATTTGATCCCGGCCGGCCTTTTTGTA]

[+] EMBL CF320424             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAAACATTAAGGGTGTAACAATAACCAATAAAAAGGAAATATAGTTAAAAATATAAAATTTTTTTACATTTTTTTTCCTTAATTGCCCAAAAATTTTTTTTTTTTAAGGGGGAAGGGTTAACCCAATTGGGACTCCTAACCCACTAACCCAAACCTGAAGGAACCTACTGGCTGAAAAAAACTTGAAAACCCGGTTGCCACCATAAAAAAAAAATAAAGGGCCCTTCCATAACCTTAAAAAAAAATTTGGGGAACTTTTCGGCTATCAAAACAGGATTTTGTTTGGAAATTTGATCCCGGCCGGCCTTTTTGTA]


>consensus_16032#6 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAAACA TTAAGGGTGTAACAATAACCAATAAAAAGGAAATATAGTTAAAAATATAAAATTTTTTTA CATTTTTTTTCCTTAATTGCCCAAAAATTTTTTTTTTTTAAGGGGGAAGGGTTAACCCAA TTGGGACTCCTAACCCACTAACCCAAACCTGAAGGAACCTACTGGCTGAAAAAAACTTGA AAACCCGGTTGCCACCATAAAAAAAAAATAAAGGGCCCTTCCATAACCTTAAAAAAAAAT TTGGGGAACTTTTCGGCTATCAAAACAGGATTTTGTTTGGAAATTTGATCCCGGCCGGCC TTTTTGTA



consensusID : consensus_16032#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGNTATCACAACAGGNTTCTGCTTGGNAATCTGATCCCGGGCGGGCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCG]

[-] EMBL C98966               [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGNTATCACAACAGGNTTCTGCTTGGNAATCTGATCCCGGGCGGGCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCG]


>consensus_16032#7 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTAAGAATATAATATATATTTACATTATT ATTCCTTAATTGCCAGAGAATGAAACCATGATAAGGAGGAAGGATAGACACAATTGGGAC TCCTAGCACACTAACCCAGACCTGAAGGAACCTACTGGCTGAAGTAAACTTGAAGACTCG GTTGCCACCATGAATAGAGATTAAATGGCCCTTCCATAACCTTCAATCAGATCTTGTTGA TCTTCTCGGNTATCACAACAGGNTTCTGCTTGGNAATCTGATCCCGGGCGGGCTTCTTGT AGTCGAAGGTGCAGTCGTGAGCTTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16032#0      ------------------CATCAAGGCTGTAACAATAAGCAATAAGATGGAAATATAGTT 42
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      ----------------------------CCGGTCAGGAAAAGTCCCGTGCCCTTCTCGCC 32
consensus_16032#2      --------------AGAGCATCGAGGCTGTAACACCCTTAAAGGGGATGGAAATATAGTT 46
consensus_16032#1      CGAAGGATGAAAATACTTCATCAAGGCTTTTTTTATAAGCAATAAGATGGAAATATAGTT 60
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      ------------------------------------------------------------
                                                                                   

consensus_16032#0      AAGAATAGAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATA 102
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      TCGCAGGTTGGTGCGCCCCTCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTG 92
consensus_16032#2      AAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGCCACCATGATA 106
consensus_16032#1      AAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAGAATGAAACCATGATA 120
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      -----------------TCTCCTCGTTCATCTTCTTCCCCCAGATCCGATCGGCGGTGGC 43
                                                                                   

consensus_16032#0      AGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCT 162
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      GCGGTGGCGGTGAAACACAATTGGGACTCCTAACACACTAACCCAAACCTGAAGGAACCT 152
consensus_16032#2      AGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCT 166
consensus_16032#1      AGGAGGAAGGATAGACACAATTGGGACTCCTAGCACACTAACCCAGACCTGAAGGAACCT 180
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      GGTGGCGGTGGCGGTGGCCGATCTGAGCCATCCGCCACCGCGGGTTCGTCGGGTGGTTGG 103
                                                                                   

consensus_16032#0      ACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTT 222
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      ACTGGCTGAAGTAAACTTGAAAACTCGGTTGCCACCATGAATAAAAATTAAATGGCCCTT 212
consensus_16032#2      ACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTT 226
consensus_16032#1      ACTGGCTGAAGTAAACTTGAAGACTCGGTTGCCACCATGAATAGAGATTAAATGGCCCTT 240
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      CTTGATTTTTTTTATTTTTTTGGGGTTTTTTTTTGGGGGGAGGGGGTTATTGGGAGATCG 163
                                                                                   

consensus_16032#0      CCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGG 282
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      CCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGG 272
consensus_16032#2      CCATAACCTTCAATCAAATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGG 286
consensus_16032#1      CCATAACCTTCAATCAGATCTTGTTGATCTTCTCGGCTATCACAACAGGATTCTGCTTGG 300
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      --------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34
consensus_16032#4      GGATGGGTGTGGTTGGATCTGTGATTGTTGTTGTTGTTGTTGATAGGGGTTGCTTGCTTG 223
                                                                                   

consensus_16032#0      CAATCTGATCCCGGCC---------GGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTT 333
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      CAATCTGATCCCGGCC---------GGCCTTCTTGTAGTCAAAGGTGCAGTCGTGAGCTT 323
consensus_16032#2      CAATCTGATCCCGGCC---------GGCCTTCTTGTAGTCGAAGGGGCAGTCGTGAGCTT 337
consensus_16032#1      CAATCTGATCCCGGCC---------GGCCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTT 351
consensus_16032#7      ------------------------------------------TTTTTTTTTTTTTTTTTT 18
consensus_16032#6      TTTTTTTTTTTTTTGA---------AAAAAAAACATTAAGGGTGTAACAATAACCAATAA 85
consensus_16032#4      CGATTTGATTGTGTGTTCGGAGGTTGACCTTATGGTTATCGATTTTGCTGTGATTTGATT 283
                                                                                   

consensus_16032#0      CGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGAC 393
consensus_16032#5      -----TACC--TCCTAAGGGAATACGGTAC-TCCGCATCGGA--CGGAAGCCAGTCAGAC 50
consensus_16032#3      CGGTATAACGGTGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAAAC 383
consensus_16032#2      CGGTATAACGGGGTGTTGAGCAAAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGAC 397
consensus_16032#1      CGGTATAACGGTGTGTTGAGCAGAAGGTACCTCCGCATCGGCACTGGAAGCCAGTCAGAC 411
consensus_16032#7      TTTTTTTTTTTAGTTAAGAATATAATATATATTTACATTATTATTCCTTAATTGCCAGAG 78
consensus_16032#6      AAAGGAAATATAGTTAAAAATATAAAATTTTTTTACATTTTTTTTCCTTAATTGCCCAAA 145
consensus_16032#4      GCTTCCAAATTTGCTGCGATT-TGATTTGATTCTAAGATGTAGTCATGTAGGGGAGATGA 342
                                                  *   *                     *      

consensus_16032#0      CAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAG-GCTCCTGTGCC 452
consensus_16032#5      A---CTTCTTACGGCATGACAGGCATCGGT-GCTGGGTGGCTTTGGAGCGCTCCTGTGCC 106
consensus_16032#3      CAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGAAG-GCTCCTGTGCC 442
consensus_16032#2      CAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAG-GCTCCTGTGCC 456
consensus_16032#1      CAACCTTCTTACGGCATGACAGGCATCGGTTGCTGGGTGGCTTTGGAG-GCTCCTGTGCC 470
consensus_16032#7      AA------TGAAACCATGATAAGGAG-GAAGGATAGACACAATTGGGA--CTCCTAGCAC 129
consensus_16032#6      AA---TTTTTTTTTTTTAAGGGGGAAGGG----TTAACCCAATTGGGA--CTCCTAACCC 196
consensus_16032#4      TTTTTTTTTTTTTACTTTTTGAGCCAATCAGCATAGGGAGGAGTGGGAGACATAGAATTC 402
                               *       *     *          *         **     *        *

consensus_16032#0      GCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGT 512
consensus_16032#5      GCTTGCTTATCCTCTACAGCTGCCGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGT 166
consensus_16032#3      GCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGT 502
consensus_16032#2      GCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGT 516
consensus_16032#1      GCTTGCTTATCCTCTACAGCTGCGGCAGGAACTTCATCTGGCTTTGCTGGCTCCAATGGT 530
consensus_16032#7      ACTAACCCAGACCTGAAGGAACCTACTGG---CTGAAGTAAACTTGAAGACTCGGTTGCC 186
consensus_16032#6      ACTAACCCAAACCTGAAGGAACCTACTGG---CTGAAAAAAACTTGAAAACCCGGTTGCC 253
consensus_16032#4      TCTCGCTTA----TGAGGAAAATTGGATG----TGGCATGTTGCTCCCAGCCTTATCTCA 454
                        **  *  *      *            *    *          *     *         

consensus_16032#0      GTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTC 572
consensus_16032#5      GTCTTCGAAGACGATGCTGGCATAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTC 226
consensus_16032#3      GTCTTCAAAAACAATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTC 562
consensus_16032#2      GTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTC 576
consensus_16032#1      GTCTTCGAAGACGATGCTGGCGTAAATGCCTTCTTCTCCACTACTGGGGCAGCCATTGTC 590
consensus_16032#7      ACCATGAATAGAGAT-------TAAATGGCC-CTTCCATAACCTTCAATCAGATCTTGT- 237
consensus_16032#6      ACCATAAAAAAAAA-------ATAAAGGGCC-CTTCCATAACCTTAAAAAAAAATTTG-- 303
consensus_16032#4      ATCGTGTGAACCTCCATGAGAGGTGAGGGAAGCTACGCCAACGATTGATACACGGTTTCT 514
                         * *                    * *    ** *   *    *          **   

consensus_16032#0      GTGACCTTC-ACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATG-CTACTGC 630
consensus_16032#5      GTGACCTTC-ACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATG-CTACTGC 284
consensus_16032#3      GTGACCTTC-ACAAAGTCCCTGTAGCACTTCAAACACATATTGTTCGTCATG-CTACTGC 620
consensus_16032#2      GTGACCTTC-ACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATG-CTACTGC 634
consensus_16032#1      GTGACCTTC-ACAAAGTCCCTGTAGCACTTCGAACACATATTGTTCGTCATG-CTACTGC 648
consensus_16032#7      -TGATCTTC-TCGGN-------TATCACAACAGG---NTTCTGCTTGGNAAT-CTGATCC 284
consensus_16032#6      GGGAACTTT-TCGGC-------TATCAAAACAGG---ATTTTGTTTGGAAAT-TTGATCC 351
consensus_16032#4      GTGTGCTTTGCCTTTGCGCGGAGATTGATAAAGGATTAAAGGGATCAACCTTTCTTGCCG 574
                         *  ***   *           *                  * *         *     

consensus_16032#0      CGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCT 690
consensus_16032#5      CGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCT 344
consensus_16032#3      CGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCT 680
consensus_16032#2      CGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCT 694
consensus_16032#1      CGAAGAAGCCACAGTTGTTTACACACAATATTGGGGCCTCCGGTGTGTGGACAGTCTCCT 708
consensus_16032#7      CGGGCGGGCTTCTTGTAGTCGAAGGTGCAGTCGTGAGCTTCG------------------ 326
consensus_16032#6      CGGCCGGCCTTTTTGTA------------------------------------------- 368
consensus_16032#4      TGCATGGCAAATCAGCGATTGATTATATTCTGGGGGGATAGCGCCATGGGATTTCTTG-- 632
                        *                                                          

consensus_16032#0      CAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGG 750
consensus_16032#5      CAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGCGAGGCGAGAAGG 404
consensus_16032#3      CAAACTCATTTTTCCAGCTTTTTTGTGCC------------------------------- 709
consensus_16032#2      CAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACA 754
consensus_16032#1      CAGACTCATTTTTCCAGCTTTCTTGTGCCATTGCTACCGGCAGGCTGTACGTGCAAAACA 768
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      ------------------------------------------------------------
                                                                                   

consensus_16032#0      GCACGGGACTTTTCCTCACCGGAGGATTCTCTCTCTCTCTCTCTATCTCGCTTTCTCTCT 810
consensus_16032#5      GCACGGGACTTTTCCTCACCGGA------------------------------------- 427
consensus_16032#3      ------------------------------------------------------------
consensus_16032#2      AATTATGAGTAAATGT-------------------------------------------- 770
consensus_16032#1      AATTATGAGTAAATGT-------------------------------------------- 784
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      ------------------------------------------------------------
                                                                                   

consensus_16032#0      CTCTTCGCGTTTTTTTGGGGGGGACGACGACGAGGCTGAGGGAGGGGAAGGTGGAGGAGG 870
consensus_16032#5      ------------------------------------------------------------
consensus_16032#3      ------------------------------------------------------------
consensus_16032#2      ------------------------------------------------------------
consensus_16032#1      ------------------------------------------------------------
consensus_16032#7      ------------------------------------------------------------
consensus_16032#6      ------------------------------------------------------------
consensus_16032#4      ------------------------------------------------------------
                                                                                   

consensus_16032#0      ACG 873
consensus_16032#5      ---
consensus_16032#3      ---
consensus_16032#2      ---
consensus_16032#1      ---
consensus_16032#7      ---
consensus_16032#6      ---
consensus_16032#4      ---
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)