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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16037#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 857 fasta sequence
[CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG-TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA-TCAGCTCGACCC-GGGGCAGAGC-TGGGCCGT-GTACGT--GCCGGC-GGGCACC-AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC-GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC-GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG-GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT-CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA-TCTTGTCACTTA--A--AAAAAAAAAAAAAA]
[+] EMBL AK102970 [CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGAT ]
[+] EMBL AK102798 [ CAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTT ]
[+] EMBL AK119160 [ TGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTTAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTT ]
[+] EMBL OSS1451A [ CAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCGTTGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCANCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAATTCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT TCCGGC GGGCACC AAa ]
[+] EMBL OS1321593 [ ACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGCAAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GNCGGC GGGCANC AAGGGCGCGCGNGTGTGGGGGCGCACGNGCTGC GGC ]
[+] EMBL AU101914 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTGTNGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAG CTAGGGCAGTNCCAGACGGGCGACTNC GGCGGCACG TGCGGTGCNCGGCCGTCGGCGCGCCGNCCGTCACGGTGGCCGANTTCTCGCTGGGCCATGCGAGCAAGGACGACTACTTCGACATC ]
[+] EMBL OS0664A [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGTTGCGGTGC ]
[+] EMBL AU222742 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGG ]
[+] EMBL AU222737 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGG ]
[+] EMBL OSS1219A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AA ]
[+] EMBL OSS1510A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGAGGTTCACCATCGTCAACAAGTNCGGGTACAACGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAATTCAGCTCGACCCGGGGGCAGANCTTGGGCCGTNTTACGTTNCCCGGCGGGGCAAC AAa ]
[+] EMBL OSS1579A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACANCGTGTNGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TNGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTTTTGGGGCGCACGGGCTTC GGCTTCATCTTCGGCGGCAGC ]
[+] EMBL CB683756 [ AACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACAGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCACGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC TGCGGCACGCTGCGGTGCGCGGTCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAAGCACCATCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA T ]
[+] EMBL OSS2995A [ AATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCNGC GGGNA C AAGGGCGCGCGCTTTTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAG CTAGGGCAGTTCCAAACGGGCGACT ]
[+] EMBL OSS2853A [ ACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCNTTTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTTCCAGACGGGCGACTNCGGGCGGCACGTTG ]
[+] EMBL C73268 [ CTCGTCG TGGTGCTCGCCGNCGCNGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGAC GNAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCNTNTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTNCCAGANGGGCGACTGN GGCGGCACG TGCGGgt ]
[+] EMBL AU094186 [ CTCCCGTCGGGCGACGGCAA TCAGTTGGACCC GGGGCANAACTTGGCCCGT GTACGT GCCGNC GGGCACCAAAGGGCGCGCGCGTGTGGGGGCGCACGGGTTGCGGGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTA A AAAAAAA ]
[+] EMBL AU101915 [ GACCC GGGNCAAAGT TGGGCCCT TTTAGT GCCGGC GGGCACC AAGGGCGCGCGCNTTTGGGGCCGCACGGGTTGC GGCTTCATCTCCGGCGGCAGCNTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGNTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGTTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGNCGGC GTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGA NTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTAA A AA ]
[-] EMBL CB683307 [ CC GGGGCAGAGC TGGGCCGT GTTCGT CCCGGC GGGCACC AAGGGCGCGTGCGTGTGGGGGCTCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTTAGGGCAGTGCCAGACGGGGGACTGC GGCGGCACGCTGCGGTGCGCGACCGTCGGCGCGCCGCCCGTCACGGTGGCGGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGAGTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGAGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGTGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTGTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGTCCGGGACGGCCAAGGCACCACCTTCTCCTGCCCCGCCGGCACCGACTACCAGATGGTGTTCTGCCCATGATGAGCTTGGTTTCGTACAGGGACAGTAATAACTATGTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACATGCGCACGGAGTGAATCACTTGTTTGGGAGAATGAAAATAAATGGATAAA TCTTGTCCCTCA A AAAAAAga ]
[+] EMBL AU223022 [ CGGCGGGCGGGCGNCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTNTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAATTCTTGTCNCTTA A AAAAA ]
[+] EMBL AU223246 [ GCGGGCGGCGGTGCCCCCNCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTA A AAAAAAAA ]
[+] EMBL AU222878 [ GCGGGCGGCGGTGCCCCCCCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTNTTCAANAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGNCGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTNTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCNCTGAGTGAATCNCTTGTTTGGGATAATGAAAATAAATGGATAAA A A A AAAAAAAAAAA ]
[+] EMBL AU161560 [ GCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGNNGTGCCCCGGCGA NTGCGCGCNAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAANCCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTAA A AA ]
[+] EMBL BM421225 [ ccgcggacgCGTGGGCGGACGCGTGGGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTGGTCA A A AAAA ]
[+] EMBL BM038769 [ gGGC GGACGCGTGGGC CGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCA A A AAA ]
[+] EMBL AU222738 [ GGGNACAGCACGTGCGGGCCGACCAAGGACACGGAGTTTTTCAAAAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCNCCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGNCAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCNCTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTATGATCAAAAAAAAAAAAAA]
consensusID : consensus_16037#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 189 fasta sequence
[ACTTTTCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTNACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGNAATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCACAAGGGCGCGCGCTTT]
[+] EMBL OSS3835A [ACTTTTCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTNACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGNAATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCACAAGGGCGCGCGCTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16037#0 CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCT 60
consensus_16037#1 -------------------------------------------------------ACTTT 5
*** *
consensus_16037#0 TCTGTCCACCTCCTCCTCCTCGTCGTGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTC 120
consensus_16037#1 TCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTN 65
*** ******************* *********** ********* *************
consensus_16037#0 ACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGC 180
consensus_16037#1 ACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGN- 124
** ***** ********************************************* ***
consensus_16037#0 AATCAGCTCGACCCGGGGCAGAGCTGGGCCGTGTACGTGCCGGCGGGCACCAAGGGCGCG 240
consensus_16037#1 AATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCAC-AAGGGCGCG 183
*** ************** * *********** ***************** *********
consensus_16037#0 CGCGTGTGGGGGCGCACGGGCTGCGGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAG 300
consensus_16037#1 CGCTTT------------------------------------------------------ 189
*** *
consensus_16037#0 ACGGGCGACTGCGGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTG 360
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 GCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGAT 420
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 GGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGC 480
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 GGCGGGCCTCGGTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAG 540
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 GCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAG 600
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 TTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACC 660
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 TTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCT 720
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 CGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAAC 780
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 CTCGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAATCTTGTCACT 840
consensus_16037#1 ------------------------------------------------------------
consensus_16037#0 TAAAAAAAAAAAAAAAA 857
consensus_16037#1 -----------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||