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Oryza sativa
cluster # 16066 cluster # 16066       Sequences # 28       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16066#0 length = 1062 sequences # 21  
consensus_16066#1 length = 684 sequences # 1  
consensus_16066#2 length = 582 sequences # 2  
consensus_16066#3 length = 413 sequences # 1  
consensus_16066#4 length = 284 sequences # 2  
consensus_16066#5 length = 134 sequences # 1  

consensusID : consensus_16066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1062
fasta sequence
                              [CTCCTCTCTCTCTTCCT-CTCG-TCGCCGG-A-GGCGGGAG-GCCATCGACGC-TG-AAGTGAAGGGG---------A-TCGCGATCTCCGGCG-AGCGTGCGGGGGAAGATGGCTGACCC-AGAGTTGGAAGCTAT-CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA-TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT-CCCGCATAGCTTT-GGTCAAACCTGATAAAG-CAAGA-GGGGT-GGAGGA-TGTTC-TTC-T-GAGAGCTGCTCAGTCCGGTGGAATATC-TGAAAAGGTGTCTGAAGAAAGGC-TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG-TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT---TAGAAATGATGATTATCAAACGCTATA-TCAACAA-CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACATTCAAAAATTTGACTGCTCCGAAGGGGAATTGCCACACGTCCGACTGGTATGTACGACTTAGCATCCGACCAGTACTTACCTGCTCCTTGCTCTGGCCCACATGGAGAGCAGCTGGCTCGTTGGAGTAAATTGATTAGCGAACAATAGGGTCGGATGTATAGCAGTACTCGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTTGCTCCTGTCTGACGTTTTGTCGGTAGATGAATTCCGGTAGCGGAGGCGTCCTGTGTGTATGCTACTAGTATTTTTTAATGTACTTTGGGTGGTATCCCAAAAAAAAAGCCGAAGGTATGCTAGAGATATCATAAGCTACAACAAGGATTGCCGGTAGGCATCCCCAATCGAGTTTCATTCCTAAAAAAAAA]

[+] EMBL AU101394             [CTCCTCTTTCT TCCCTCCTNGTTCGCCGGAA GCCGGAAG CCCATGGCCGCTTGAAAGT AAAGGG         A TCGCGATTTCCGGCGAAGCGTNCGGGGAAAGATGNCTGACCCAAAAGTTGGAAGCTAT CAGCCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTNCGGCAAATCCGCAAAATGCTGGGCACCAAAAAGCTCAAGAAGATGCAAAGCA GAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACATTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK122158             [   CTCTCTCTCTTCCT CTCG TCGCCGG A GGCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF297269             [   CTCTCTCTCTTCCT CTCG TCGCCGG A GGCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGAGGGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF309489             [ ttCTCTCTCTCTTCCT CTCG TCGCCGG A GGCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCANAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCTACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK058330             [       CTCTCTTCCT CTCG TCGCCGG A GGCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU064427             [         CTCTTCCT CTCG TCGCCGG A GGCGANGT GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTTGGGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR3085A             [         CTCTTCCT CTCG TCGCCGG A GGNGNANG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT TGAGGA TGTTC TTCTT GAGA CTTCTCAGTCCGGTGGAATATC TTAAAAGGTGTCTTAAGGAAGG  TTATCTCACTTCTGGNGCAAATCAATTNCCACACTTGC AACAG CGGAAGTTACGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU064381             [           CTTCCT CTCG TCGCCGG ANGGNATG T GCCATCGACGC TG AAGTNAAGGGG         A TCGCGATCTCCGGCG AGCGTNCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATTGATGCTTGCTCAGATTTTATCTTCTGAAGNTAGAGAAAGGCTCT CCCGCATAGCTTTGGGNCAAACCTGATAAAGCCANAA GGGGT GGAGGATTGTTCTTTN TGGAGACCTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA999086             [            TTCCT CTCG TCGCC         GGAG GCCATCGACGC TG AAGTGAAGGGGGGCCTCGCAAGTCGCGATCTCCGGTG AGCGCGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGAGGGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAGCTGCATGTGTGTTTGTGTGTACGATGAGCTGGT   GGAGTCTGCCGTAGCGCAGAACTACTTGCTAAAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATNTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU070678             [                        cnCCGG A GCCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTNCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF282295             [                           CGG A GGCGGGAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGTTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGTGGGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSS16558A            [                           CGG A GG GNANGNGCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATCTTNAAAAGGTGTCTNAGGAAAGGCTTTATCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C74196               [                            GG A GG NGANG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCANCACCNNNCCAAANAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA NGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB685352             [                                      GAG GCCATCGACGC TG AAGTGAAGGGG         A TCGCGATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAACCCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCCCACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGAGGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C73283               [                                       AG GCCATCGACGC TG AAGTGAAGGGG         A TCGCNATCTCCGGCG AGCGTGCGGGGGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGANCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGNCGGAAGTTACGATTCANAGGCGCCGGAGCGTCCTTNACGGTGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU166058             [                                                                                                       GGGAAAAATGCTTGACCC AGAGTTGNAAGCTATCCAGCCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCACCAAAAAGCTCAAGAAGATGCAAAGCA GAAGCTGAGGAACGNCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACATTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AY327105             [                                                                                                 aattcgattGAAGATGGCTGACCC AGAGTTGGAAGCTAT CAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGA TGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCT CCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGGCGACGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU031995             [                                                                                                                                                                                                                                               AGGAACGGCGGCAGA TGATGCTTNCTCAGATTTNATCTTCTGAAGCNAGAGAAAGGCTCTCCCCGCATAGCTTT GGTCAAACCTGATAAAG CAAGA GGGGT GGAGGA TGTTC TTC T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACAaaaa                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSC30381             [                                                                                                                                                                                                                                                                                                                                                                        C T GAGAGCTGCTCAGTCCGGTGGAATATC TGAAAAGGTGTCTGAAGAAAGGC TTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTNCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATA TCAACAA CCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACATTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF297270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCGGAGCGTCCTTGACGATGATGACTAGCTGCATGTGTG TTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT   TAGAAATGATGATTATCAAACGCTATACTCAACAACCCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACATTCAAACTTTTGACTGCTCCGAAGGGGAATTGCCACACGTCCGACTGGTATGTACGACTTAGCATCCGACCAGTACTTACCTGCTCCTTGCTCTGGCCCACATGGAGAGCAGCTGGCTCGTTGGAGTAAATTGATTAGCGAACAATAGGGTCGGATGTATAGCAGTACTCGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTTGCTCCTGTCTGACGTTTTGTCGGTAGATGAATTCCGGTAGCGGAGGCGTCCTGTGTGTATGCTACTAGTATTTTTTAATGTACTTTGGGTGGTATCCCAAAAAAAAA                                                                                    ]
[-] EMBL CF310678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GACTGCTCCGAAGGGGAATTGCCACACGTCCGACTGGTATGTACGACTTAGCATCCGACCAGTACTTACCTGCTCCTTGCTCTGGCCCACATGGAGAGCAGCTGGCTCGTTGGAGTAAATTGATTAGCGAACAATAGGGTCGGATGTATAGCAGTACTCGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTTGCTCCTGTCTGACGTTTTGTCGGTAGATGAATTCCGGTAGCGGAGGCGTCCTGTGTGTATGCTACTAGTATTTTTTAATGTACTTTGGGTGGTATCACAATGACCGTGCCGAAGGTATGCTAGAGATATCATAAGCTACAACAAGGATTGCCGGTAGGCATCCCCAATCGAGTTTCATTCCTAAAAAAAAA]


>consensus_16066#0 CTCCTCTCTCTCTTCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTGAAGTGAAGGG GATCGCGATCTCCGGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCA GGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTG GGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGC TTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCTTTGGTCAAAC CTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATAT CTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATACCCACACTA GCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGATGATGACTAGC TGCATGTGTGTTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCTGTAGCGCAAAACTACT TAGAAATGATGATTATCAAACGCTATATCAACAACCATCAAAACTTGAGCGACTATTTGA TGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGACA TTCAAAAATTTGACTGCTCCGAAGGGGAATTGCCACACGTCCGACTGGTATGTACGACTT AGCATCCGACCAGTACTTACCTGCTCCTTGCTCTGGCCCACATGGAGAGCAGCTGGCTCG TTGGAGTAAATTGATTAGCGAACAATAGGGTCGGATGTATAGCAGTACTCGCTCCGAAGT GTGTATCCATCATATCATGAGTATCTTAGTTGCTCCTGTCTGACGTTTTGTCGGTAGATG AATTCCGGTAGCGGAGGCGTCCTGTGTGTATGCTACTAGTATTTTTTAATGTACTTTGGG TGGTATCCCAAAAAAAAAGCCGAAGGTATGCTAGAGATATCATAAGCTACAACAAGGATT GCCGGTAGGCATCCCCAATCGAGTTTCATTCCTAAAAAAAAA



consensusID : consensus_16066#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence
                              [ATTCGGCANAGNCTTCCTCTCGTGNNCCGGNANCAGNCGNACGCTGNAAGTGAAGGGGGGNCCTCGCAAGTCGCGATCTCCGGTGAGCGCGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGNCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGNAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCTTTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATANCCCACACTTAGCAAACAGACGAAAGTTTACGATTTCAGAGGCGCCGGAGCGTNCCTTTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGANCTGGTTGAGAGCTNCCGTAACGCNAAACTGCTTTGCTAAAATGNTGGTNTCCAACCGCTTTTTTAACAACATCAAACTTAGGGCATTNGGGATTGGGGANNAAANCCGTTGGTGGGTTTTCNAAAAAAAAACNGGGGGTTTANAACTTTTGACCGGCCCCN]

[+] EMBL AI096149             [ATTCGGCANAGNCTTCCTCTCGTGNNCCGGNANCAGNCGNACGCTGNAAGTGAAGGGGGGNCCTCGCAAGTCGCGATCTCCGGTGAGCGCGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGNCAAATCCGCAAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGNAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCTTTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATANCCCACACTTAGCAAACAGACGAAAGTTTACGATTTCAGAGGCGCCGGAGCGTNCCTTTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGANCTGGTTGAGAGCTNCCGTAACGCNAAACTGCTTTGCTAAAATGNTGGTNTCCAACCGCTTTTTTAACAACATCAAACTTAGGGCATTNGGGATTGGGGANNAAANCCGTTGGTGGGTTTTCNAAAAAAAAACNGGGGGTTTANAACTTTTGACCGGCCCCN]


>consensus_16066#1 ATTCGGCANAGNCTTCCTCTCGTGNNCCGGNANCAGNCGNACGCTGNAAGTGAAGGGGGG NCCTCGCAAGTCGCGATCTCCGGTGAGCGCGCGGGGGAAGATGGCTGACCCAGAGTTGGA AGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGNCAAATCCGC AAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGNAAGCTGAGGAACGGCGG CAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCT TTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCC GGTGGAATATCCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAA TANCCCACACTTAGCAAACAGACGAAAGTTTACGATTTCAGAGGCGCCGGAGCGTNCCTT TGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGANCTGGTTGAGAGCTNCCG TAACGCNAAACTGCTTTGCTAAAATGNTGGTNTCCAACCGCTTTTTTAACAACATCAAAC TTAGGGCATTNGGGATTGGGGANNAAANCCGTTGGTGGGTTTTCNAAAAAAAAACNGGGG GTTTANAACTTTTGACCGGCCCCN



consensusID : consensus_16066#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 582
fasta sequence
                              [CTCTTCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTGAAGTGAAGGGGATCGCGATCTCCGGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCGTAAGTTAT-GTTGATGTCATTTTTTGGTGAACATTTGAAGTTATTTTTTAGATCGTTTACGGAGGTAAAGTCAGTTTTTTAGAGGATACAGCCTTGTAGGGGATAATGGAGGGCCATGGCTTTAGGGTTTTTTTAACCCAGGGCCATGGGTCAGGTACTTTTCTCCACAGCAGTTTAAGGGATTATGCTTAAGGGCCCATCCCGATTCTTTTGAAAAGCCCCAAAGGGATGGGTTGGGAAAATTTTACAAAGGGGGGTTATTCGCACTTGGAAGTTGGGGACCTTCCTTATTCCCTTAGGAACCATTTATTTGGT]

[+] EMBL CA754533             [CTCTTCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTGAAGTGAAGGGGATCGCGATCTCCGGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCGTAAGTTAT GTTGATGTCATTTTTTGGTGAACATTTGAAGTTATTTTTTAGATCGTTTACGGAGGTAAAGTCAGTTTTTTAGAGGATACAGCCTTGTAGGGGATAATGGAGGGCCATGGCTTTAGGGTTTTTTTAACCCAGGGCCATGGGTCAGGTACTTTTCTCCACAGCAGTTTAAGGGATTATGCTTAAGGGCCCATCCCGATTCTTTTGAAAAGCCCCAAAGGGATGGGTTGGGAAAATTTTACAAAGGGGGGTTATTCGCACTTGGAAGTTGGGGACCTTCCTTATTCCCTTAGGAACCATTTATTTGGT]
[+] EMBL CA882930             [                                                                                                                                                  ctttaGGCAAATCCACAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCGTAAGTTATGGTTGATGTCA TTTTTGTTGAACATTTGAAGTTA TTTTTAGATCGTTTACGGAGTTAAAGTCAGTTTTTTAGAGGATACAGCCTTGTAGGGGATAATGGAGGTCCATGTCTTATGTGTTTTTTTACCACAGTGCCAa                                                                                                                                                                        ]


>consensus_16066#2 CTCTTCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTGAAGTGAAGGGGATCGCGAT CTCCGGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGA GAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAA AAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGA TTTTATCTTCTGAAGCTAGAGAAAGGCGTAAGTTATGTTGATGTCATTTTTTGGTGAACA TTTGAAGTTATTTTTTAGATCGTTTACGGAGGTAAAGTCAGTTTTTTAGAGGATACAGCC TTGTAGGGGATAATGGAGGGCCATGGCTTTAGGGTTTTTTTAACCCAGGGCCATGGGTCA GGTACTTTTCTCCACAGCAGTTTAAGGGATTATGCTTAAGGGCCCATCCCGATTCTTTTG AAAAGCCCCAAAGGGATGGGTTGGGAAAATTTTACAAAGGGGGGTTATTCGCACTTGGAA GTTGGGGACCTTCCTTATTCCCTTAGGAACCATTTATTTGGT



consensusID : consensus_16066#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 413
fasta sequence
                              [AAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCCGTAGCGCAAAACTGCTTGCTAAAAATGATGATTATCAAACGCTATATCAACAACCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGATATTCAAACTTTTGACTGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTT]

[-] EMBL BI305649             [AAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAACAGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCCGTAGCGCAAAACTGCTTGCTAAAAATGATGATTATCAAACGCTATATCAACAACCATCAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGATATTCAAACTTTTGACTGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTT]


>consensus_16066#3 AAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCCGGTGGAATATCTGAAA AGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAATACCCACACTAGCAAAC AGACGAAAGTTACGATTCAGAGGCGCCGGAGCGTCCTTGACGACGATGACTAGCTGCATG TGTGTTGTGTGTACGATGAGCTGGTGGAGGAGTCTGCCGTAGCGCAAAACTGCTTGCTAA AAATGATGATTATCAAACGCTATATCAACAACCATCAAAACTTGAGCGACTATTTGATGG ATATTTGGCCGTATATGAATTAATTCGAGTTTGGTTTGGCTTGTTCCATTGATGATATTC AAACTTTTGACTGCTCCGAAGTGTGTATCCATCATATCATGAGTATCTTAGTT



consensusID : consensus_16066#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 284
fasta sequence
                              [GAGCAAATCAATACCCCCCCTAGCAAACAGACGAAAGTTTCGATTCAGAGGCGCCGGAGGGTCCTTGACGATAATGACTAGCTGCATGTGTGTTGTGTGTACAATAAGCTGGTGGAGGAGTTTGCTGTAGCGCAAAACTATTTAGAAATGATGATTATCAAACGTTATATCACCACCCATCAAAACTTGAGCGACTATTTGATGGATATT-TGGCCGTAAATGAATTAATTCGAGTT-TGGTTG-GGCT-TGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF282294             [GAGCAAATCAATACCCCCCCTAGCAAACAGACGAAAGTTTCGATTCAGAGGCGCCGGAGGGTCCTTGACGATAATGACTAGCTGCATGTGTGTTGTGTGTACAATAAGCTGGTGGAGGAGTTTGCTGTAGCGCAAAACTATTTAGAAATGATGATTATCAAACGTTATATCACCACCCATCAAAACTTGAGCGACTATTTGATGGATATT TGGCCGTAAATGAATTAATTCGAGTT TGGTTG GGCT TGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF316783             [           tcCCCCCCTTAGCAACCAGACGAAAGTTACGATTCAGAGGCCCCGGAGGGCCCTTGACAATAATGACTAGCGGCATGTGTGTTGTGTGTCCAATAAGCTGGTGGAGGAGTTTGCTGTAGCGCAAAACTCTTTAGAAATGATGATTATCAAACGTTATATCACCACCCATCAAAACTTGAGCGACTATTTGAGGGATATTGTGCCCGTATATGAATTAATTCGAGTTGTGGTTGTGGCTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA   ]


>consensus_16066#4 GAGCAAATCAATACCCCCCCTAGCAAACAGACGAAAGTTTCGATTCAGAGGCGCCGGAGG GTCCTTGACGATAATGACTAGCTGCATGTGTGTTGTGTGTACAATAAGCTGGTGGAGGAG TTTGCTGTAGCGCAAAACTATTTAGAAATGATGATTATCAAACGTTATATCACCACCCAT CAAAACTTGAGCGACTATTTGATGGATATTTGGCCGTAAATGAATTAATTCGAGTTTGGT TGGGCTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16066#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 134
fasta sequence
                              [GCTGCATGTGTGTGTGTGTACATAATTTTTTGAGAGTCTGCTGTAGCGCAAAACTACTTAGAAATGATGATTATCAAACGCTATATCAACAACCATCAAACTGACGACTATTTGATGATATTTGCGTATATAAA]

[-] EMBL D42216               [GCTGCATGTGTGTGTGTGTACATAATTTTTTGAGAGTCTGCTGTAGCGCAAAACTACTTAGAAATGATGATTATCAAACGCTATATCAACAACCATCAAACTGACGACTATTTGATGATATTTGCGTATATAAA]


>consensus_16066#5 GCTGCATGTGTGTGTGTGTACATAATTTTTTGAGAGTCTGCTGTAGCGCAAAACTACTTA GAAATGATGATTATCAAACGCTATATCAACAACCATCAAACTGACGACTATTTGATGATA TTTGCGTATATAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      ----------CTCCTCTCTCTCTTCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTG 50
consensus_16066#1      ATTCGGCANAGNCTTCCTCTCGTGNNCCGGNANCAGNCGNACGCTGNAAGTGAAGGGGGG 60
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      AAGTGAAGGGGATCGCGATCTCCGGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTG 110
consensus_16066#1      NCCTCGCAAGTCGCGATCTCCGGTGAGCGCGCGGGGGAAGATGGCTGACCCAGAGTTGGA 120
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      GAAGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCG 170
consensus_16066#1      AGCTATCAGGCAGAGGAGAATGCAAGAGCTAATGGCACAGCGTGGTGCGGNCAAATCCGC 180
consensus_16066#2      --------------------------------------------------------CTCT 4
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      CAAAATGCTGGGCAACAAAAAGCTCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGG 230
consensus_16066#1      AAAACACTGGGCAACAAAAGGCTCAAGAAGATGCAAAGCAGGNAAGCTGAGGAACGGCGG 240
consensus_16066#2      TCCTCTCGTCGCCGGAGGCGGGAGGCCATCGACGCTGAAGTGAAGGGGATCGCGATCTCC 64
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      CAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCT 290
consensus_16066#1      CAGATGATGCTTGCTCAGATTTTATCTTCTGAAGCTAGAGAAAGGCTCTCCCGCATAGCT 300
consensus_16066#2      GGCGAGCGTGCGGGGGAAGATGGCTGACCCAGAGTTGGAAGCTATCAGGCAGAGGAGAAT 124
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ----------------AAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCC 44
consensus_16066#0      TTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCC 350
consensus_16066#1      TTGGTCAAACCTGATAAAGCAAGAGGGGTGGAGGATGTTCTTCTGAGAGCTGCTCAGTCC 360
consensus_16066#2      GCAAGAGCTAATGGCACAGCATGGTGCGGCAAATCCGCAAAATGCTGGGCAACAAAAAGC 184
                                                                                   

consensus_16066#4      -------------------------------------------------GAGCAAATCAA 11
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      GGTGGAATATC-TGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAA 103
consensus_16066#0      GGTGGAATATC-TGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAA 409
consensus_16066#1      GGTGGAATATCCTGAAAAGGTGTCTGAAGAAAGGCTTATCTCACTTCTGGAGCAAATCAA 420
consensus_16066#2      TCAAGAAGATGCAAAGCAGGAAGCTGAGGAACGGCGGCAGATGATGCTTGCTCAGATTTT 244
                                                                                   

consensus_16066#4      TACCCCCC--CTAGCAAACAGACGAAAGTTT---CGATT-CAG--------AGGCGCCGG 57
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      TACCCACA--CTAGCAAACAGACGAAAGTTA---CGATT-CAG--------AGGCGCCGG 149
consensus_16066#0      TACCCACA--CTAGCAAACAGACGAAAGTTA---CGATT-CAG--------AGGCGCCGG 455
consensus_16066#1      TANCCCACACTTAGCAAACAGACGAAAGTTTA--CGATTTCAG--------AGGCGCCGG 470
consensus_16066#2      ATCTTCTGAAGCTAGAGAAAGGCGTAAGTTATGTTGATGTCATTTTTTGGTGAACATTTG 304
                                                                                   

consensus_16066#4      AGGGTCC--TTGACGATAATGACTAGCTGCATGTGTGTTGTGTGTACAATAAGCTGGTGG 115
consensus_16066#5      -------------------------GCTGCATGTGTGT-GTGTGTACA-TAATTTTTTGA 33
consensus_16066#3      AGCGTCC--TTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGAGCTGGTGG 207
consensus_16066#0      AGCGTCC--TTGACGATGATGACTAGCTGCATGTGTGTTGTGTGTACGATGAGCTGGTGG 513
consensus_16066#1      AGCGTNCCTTTGACGACGATGACTAGCTGCATGTGTGTTGTGTGTACGATGANCTGGTTG 530
consensus_16066#2      AAGTTATTTTTTAGATCGTTTACGGAGGTAAAGTCAGTTTTTTAGAGGATACAGCCTTGT 364
                                                     * **  **  * *  *   *       *  

consensus_16066#4      AGGAGTTTGCTGTAGCGCAAAACT----ATTT---AGAAATGATGATTATCAAACGTTAT 168
consensus_16066#5      --GAGTCTGCTGTAGCGCAAAACT----ACTT---AGAAATGATGATTATCAAACGCTAT 84
consensus_16066#3      AGGAGTCTGCCGTAGCGCAAAACT----GCTTGCTAAAAATGATGATTATCAAACGCTAT 263
consensus_16066#0      AGGAGTCTGCTGTAGCGCAAAACT----ACTT---AGAAATGATGATTATCAAACGCTAT 566
consensus_16066#1      A-GAG-CTNCCGTAACGCNAAACT----GCTTTGCTAAAATGNTGGTNTCCAACCGCTTT 584
consensus_16066#2      AGGGGATAATGGAGGGCCATGGCTTTAGGGTTTTTTTAACCCAGGGCCATGGGTCAG-GT 423
                         * *      *     *    **      **     **     *         *    *

consensus_16066#4      ATCACCACCCATCAAAACTTGAGCGACTAT--TTGATGG-ATATTTGGCCGTAAATGAAT 225
consensus_16066#5      ATCAACAACCATCAAA--CTGA-CGACTAT--TTGATG--ATATTTG--CGTATATAAA- 134
consensus_16066#3      ATCAACAACCATCAAAACTTGAGCGACTAT--TTGATGG-ATATTTGGCCGTATATGAAT 320
consensus_16066#0      ATCAACAACCATCAAAACTTGAGCGACTAT--TTGATGG-ATATTTGGCCGTATATGAAT 623
consensus_16066#1      TTTAACAAC-ATCAAACTTAGGGCATTNGG--GATTGGG-GANNAAANCCGTTGGTGGGT 640
consensus_16066#2      ACTTTTCTCCACAGCAGTTTAAGGGATTATGCTTAAGGGCCCATCCCGATTCTTTTGAAA 483
                               * *    *                     *                 *    

consensus_16066#4      TAATTCGA---GTTTGGTTGGGCTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 282
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      TAATTCGA---GTTTGGTTTGGCTTGTTCCATTGATGATATTCAAACTTTTGACTGCTCC 377
consensus_16066#0      TAATTCGA---GTTTGGTTTGGCTTGTTCCATTGATGACATTCAAAAATTTGACTGCTCC 680
consensus_16066#1      TTTCNAAA---AAAAAACNGGGGGTTTANAACTTTTGACCGGCCCCN------------- 684
consensus_16066#2      AGCCCCAAAGGGATGGGTTGGGAAAATTTTACAAAGGGGGGTTATTCGCACTTGGAAGTT 543
                                                                                   

consensus_16066#4      AA---------------------------------------------------------- 284
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      GAAGTGTGTATCCATCATATCATGAGTATCTTAGTT------------------------ 413
consensus_16066#0      GAAGGGGAATTGCCACACGTCCGACTGGTATGTACGACTTAGCATCCGACCAGTACTTAC 740
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      GGGGACCTTCCTTATTCCCTTAGGAACCATTTATTTGGT--------------------- 582
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      CTGCTCCTTGCTCTGGCCCACATGGAGAGCAGCTGGCTCGTTGGAGTAAATTGATTAGCG 800
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      AACAATAGGGTCGGATGTATAGCAGTACTCGCTCCGAAGTGTGTATCCATCATATCATGA 860
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      GTATCTTAGTTGCTCCTGTCTGACGTTTTGTCGGTAGATGAATTCCGGTAGCGGAGGCGT 920
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      CCTGTGTGTATGCTACTAGTATTTTTTAATGTACTTTGGGTGGTATCCCAAAAAAAAAGC 980
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ------------------------------------------------------------
consensus_16066#5      ------------------------------------------------------------
consensus_16066#3      ------------------------------------------------------------
consensus_16066#0      CGAAGGTATGCTAGAGATATCATAAGCTACAACAAGGATTGCCGGTAGGCATCCCCAATC 1040
consensus_16066#1      ------------------------------------------------------------
consensus_16066#2      ------------------------------------------------------------
                                                                                   

consensus_16066#4      ----------------------
consensus_16066#5      ----------------------
consensus_16066#3      ----------------------
consensus_16066#0      GAGTTTCATTCCTAAAAAAAAA 1062
consensus_16066#1      ----------------------
consensus_16066#2      ----------------------
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)