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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16190#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3091 fasta sequence
[GCGCGTCGAGGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACC-GCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAGCGCCCCCCCGGTGTAAAAGCTCCCCTTGTTCTCTTCCTCCGGCTGAAATGGGTTCGTTTCGTTAGATTTGGGATCGATTTGGAGGCGTTAGGGTTGTTCGGAAGTGCTCACCTTGATCTATCTATTGGAGATTATGTAGAGCTTTTTCATGTGAAACAGATTAGTAATTTGCATATTGAAACTGTGGCGCGGGGTTGGACTGGCTAGTTGTTCGTTTGCTTCCCATGACAATTCATGTTTGCTTTTTTTTTTTCAAAAGATTAGGTGTCTAATTACATGGTGAAATATTTCATCCATAGGAATACTAAGAATGTATTTAGCACGTACGATCGGTGGAGAACAAAATTCTTGAGAAATGTATATACTAGGTGCCAATGAAGTCTGAACATCATTGGTTCTAGTCTTAGCATTCGTTCTGCCGTATAAGTATATACCTGCCCTAAGAAGAGGCATGTTGTGCCAACGAAATGTATATTGATTTGGTCATCAAGTCAACACATGTGGATAGCACTTGGTAAGATAACTGACTGGATGGCTGGATGCCTTTCCCCTTTAGCTGCATCTTAAGCTGTGATACTTGAAAATTGCATCTTTAATCTAGGTAGATATGTTTTACTATAACCCTAACTAGACTATCATGTGAAGCATGTTTCTGTACTATATGACATGTTGCCATCTATGTTGGAGCAAACATTATTCTTTTCTCAGTCCTGGTTGAATTCACTTTAAGATGCAAATAAGCTTGTTTCACATAATTTAGTATCACCTTTTTTTTCTTCCCTTTTCTGCATGATCATTGTCAGAATCTTATGTTTTTCACCTTCTAATGTGAACTTAAGAACTTGTCAGTGCACCACTATTTTTTTGCATTGTGTTAGATACTTGAGTTACATAGTTAGGAGGTGTCCTTTTTCTGTGCATTGTGGTGAAATGAGAGCCAACATCCTTGCCGAAGTTACTCTAACTTTAGCATTGTTTGCTGTCACACGCCACTGTCTTCCCAGACTTCCATAAGTCGATTATCCTCTGGCAGATTCATTTGATCATTTCATACGGATTAGTGTTTTAATTTGAAAGGGGCAACTTCTAACAAAGGCATAGTTACATTTTATGATAAGTAGTTAGATGCCCATGTTGCAACGGGATCGAAAGATAGAAATATGATTCAGTCTCTCTATACCCGTTTTTCACAAAGAGTTGGGTTTTGGGTTTGTTTAGAGCAGTTTTTTATACCTCTCCTTAATGGAAATCGTGGAATCTATAGTTTATATCAATTAAGGAAGTCACTTCAAAATCTGGTTTTCTGAAGATGTATTCTTTTGTGATTAAGCTTTTTATGTATTTTTTTTTATATGTTTTGCATGCATGATTAGTTCCCTCCAACATTGCTCAAGCACATCGGCGGAGGAGCTAAAGCAAAGTTCTGCGCTGTTTGTTGTCCTATGTCTATTGCACTCCCTGGTATTTCCGTGATTAATTGCCTAACAGGTGTATTATGTGCTGCAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCATGCCCTTGTTTGAATTATGACCTGCACTACCTGATCAGTGCAACCAAGATAACTTTCAGATAAAAACTACCAAATCCGCGATGCGCTTGATTGATCAGCCTTGTTGGTTTGGCCTTTTTTATATGGAAGTCAGCAAGGCGATGATTTCTGCGTTGCGTCGCATAATCTGAACAAAAGCAAGTGGCGTGTGCTGTACACTGCTATTGAACAGATGAATGGGTTGTACTCCTAGAAGTTAGTCTGCACAGGGCGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGAGTTGTGCAATTCTGACGTTGGGCGTAGCGAGTACCCGTCTCCCCTGCGCTGTCCTCCATTTCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATCCAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATCGCTACCCCTCCT-GAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCATCCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGCGATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGGCTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAGCGA-TTAACAAACCGATCTCTTCTTCCCTCACCATCGCTGCCCCTCATGTACCTCCTAGTCCTCTCCCCATTGTT-GGTATTAGCCATATA-TTTCAGCTCCGGTCTATCTCT-GCCATTTTCGCTTC-GGTTCAACCTGTTCTGAGTTTTCCATTTTGGCATCAACTTGTGATCCATTCCACTGTCTGAATTTGAACCAAACTCATCATCCGTCCAACCCTTTCTAGGAACATTCCTACCGCCTTCGTTGGGGGGATTCCACCTCCTAACATCATTCGTTGTGCGCCCTCTAGTCGTGGATCTCCATTTTGGTT]
[+] EMBL AK072445 [GCGCGTCGAGGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACC GCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAGCGCCCCCCCGGTGTAAAAGCTCCCCTTGTTCTCTTCCTCCGGCTGAAATGGGTTCGTTTCGTTAGATTTGGGATCGATTTGGAGGCGTTAGGGTTGTTCGGAAGTGCTCACCTTGATCTATCTATTGGAGATTATGTAGAGCTTTTTCATGTGAAACAGATTAGTAATTTGCATATTGAAACTGTGGCGCGGGGTTGGACTGGCTAGTTGTTCGTTTGCTTCCCATGACAATTCATGTTTGCTTTTTTTTTTTCAAAAGATTAGGTGTCTAATTACATGGTGAAATATTTCATCCATAGGAATACTAAGAATGTATTTAGCACGTACGATCGGTGGAGAACAAAATTCTTGAGAAATGTATATACTAGGTGCCAATGAAGTCTGAACATCATTGGTTCTAGTCTTAGCATTCGTTCTGCCGTATAAGTATATACCTGCCCTAAGAAGAGGCATGTTGTGCCAACGAAATGTATATTGATTTGGTCATCAAGTCAACACATGTGGATAGCACTTGGTAAGATAACTGACTGGATGGCTGGATGCCTTTCCCCTTTAGCTGCATCTTAAGCTGTGATACTTGAAAATTGCATCTTTAATCTAGGTAGATATGTTTTACTATAACCCTAACTAGACTATCATGTGAAGCATGTTTCTGTACTATATGACATGTTGCCATCTATGTTGGAGCAAACATTATTCTTTTCTCAGTCCTGGTTGAATTCACTTTAAGATGCAAATAAGCTTGTTTCACATAATTTAGTATCACCTTTTTTTTCTTCCCTTTTCTGCATGATCATTGTCAGAATCTTATGTTTTTCACCTTCTAATGTGAACTTAAGAACTTGTCAGTGCACCACTATTTTTTTGCATTGTGTTAGATACTTGAGTTACATAGTTAGGAGGTGTCCTTTTTCTGTGCATTGTGGTGAAATGAGAGCCAACATCCTTGCCGAAGTTACTCTAACTTTAGCATTGTTTGCTGTCACACGCCACTGTCTTCCCAGACTTCCATAAGTCGATTATCCTCTGGCAGATTCATTTGATCATTTCATACGGATTAGTGTTTTAATTTGAAAGGGGCAACTTCTAACAAAGGCATAGTTACATTTTATGATAAGTAGTTAGATGCCCATGTTGCAACGGGATCGAAAGATAGAAATATGATTCAGTCTCTCTATACCCGTTTTTCACAAAGAGTTGGGTTTTGGGTTTGTTTAGAGCAGTTTTTTATACCTCTCCTTAATGGAAATCGTGGAATCTATAGTTTATATCAATTAAGGAAGTCACTTCAAAATCTGGTTTTCTGAAGATGTATTCTTTTGTGATTAAGCTTTTTATGTATTTTTTTTTATATGTTTTGCATGCATGATTAGTTCCCTCCAACATTGCTCAAGCACATCGGCGGAGGAGCTAAAGCAAAGTTCTGCGCTGTTTGTTGTCCTATGTCTATTGCACTCCCTGGTATTTCCGTGATTAATTGCCTAACAGGTGTATTATGTGCTGCAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCATGCCCTTGTTTGAATTATGACCTGCACTACCTGATCAGTGCAACCAAGATAACTTTCAGATAAAAACTACCAAATCCGCGATGCGCTTGATTGATCAGCCTTGTTGGTTTGGCCTTTTTTATATGGAAGTCAGCAAGGCGATGATTTCTGCGTTGCGTCGCATAATCTGAACAAAAGCAAGTGGCGTGTGCTGTACACTGCTATTGAACAGATGAATGGGTTGTACTCCTAGAAGTTAGTCTGCACAGGGCGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGA ]
[+] EMBL OSC2201 [ AGGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGANATCNGCNGCGTCGATNGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCNGCTNCNGGACGACTNGAGGAGGCACCCGATGGTTGGGAACCAGCTNCGCCACGCCACGCCGGGGCTCGGCATCG CATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCC CCTACAACCGCCTCTACCAGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACG GCGGtag ]
[-] EMBL AA750319 [ gGTCGCATAATCTGAANAAAAGNAAGTGGCGTGTGCTGTACACTGCTATTGAACAGATGAATGGGTTGTACTCCTAGAAGTTAGTCTGCACAGGGNGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCATC ]
[-] EMBL AU029619 [ tttTTAGTCTGCACAGGGCGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGAGTTGTGCAATTCTGACGTTGGGCGTA CGAGTACCCGTCTCCCCTGCGCTGTCCTCCATTTCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATCCAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATCGCTACCCCTCCTGGAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCATCCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGGGATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGGCTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAG GATTTAACAAACCGATCTCTTCTTCCCTCANCANCGGTGCCCCTCATGTACCTCCTAGTCCTCTCCCCA TGTTGGGTATTAGNCATATATTTTCAGCTCCGGTCTANCTCTGGCCA TTTCGGTTCGGGTTCAAACTGTT ]
[+] EMBL CB674205 [ GGGCGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGAGTTGTGCAATTCTGACGTTGGGCGTAGCGAGTACCCGTCTCCCCTGCGCTGTCCTCCATTTCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATCCAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATCGCTACCCCTCCT GAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCATCCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGCGATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGGCTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAGCGA TTAACAAACCGATCTCTTCTTCCCTCACCATCGCTGCCCCTCATGTACCTCCTAGTCCTCTCCCCATTGTT GGTATTAGCCATATA TTTCAGCTCCGGTCTATCTCT GCCATTTTCGCTTC GGTTCAACCTGTTCTGAGTTTTCCATTTTGGCATCAACTTGTGATCCATTCCACTGTCTGAATTTGAACCAAACTCATCATCCGTCCAACCCTTTCTAGGAACATTCCTACCGCCTTCGTTGGGGGGATTCCACCTCCT ]
[+] EMBL CB681225 [ ttagGTTATTTGTTTATCATCATTGTAAAATACTACCACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGAGTTGTGCAATTCTGACGTTGGGCGTAGCGAGTACCCGTCTCCCCTGCGCTGTCCTCCATTTCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATCCAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATCGCTACCCCTCCT GAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCATCCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGCGATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGGCTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAGCGA TTAACAAACCGATCTCTTCTTCCCTCACCATCGCTGCCCCTCATGTACCTCCTAGTCCTCTCCCCATTGTT GGTATTAGCCATATA TTTCAGCTCCGGTCTATCTCT GCCATTTTCGCTTC GGTTCAACCTGTTCTGAGTTTTCCATTTTGGCATCAACTTGTGATCCATTCCACTGTCTGAATTTGAACCAAACTCATCATCCGTCCAACCCTTTCTAGGAACATTCCTACCGCCTTCGTTGGGGGGATTCCACCTCCTAACATCATTCGTTGTGCGCCCTCTAGTCGTGGAT ]
[+] EMBL CB684206 [ gTATTTGTTTATCATCATTGTAAAATACTAGCACTACATTTCATCTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGAGTTGTGCAATTCTGACGTTGGGCGTAGCGAGTACCCGTCTCCCCTGCGCTGTCCTCCATTTCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATCCAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATCGCTACCCCTCCT GAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCATCCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGCGATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGGCTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAGCGA TTAACAAACCGATCTCTTCTTCCCTCACCATCGCTGCCCCTCATGTACCTCCTAGTCCTCTCCCCATTGTT GGTATTAGCCATATA TTTCAGCTCCGGTCTATCTCT GCCATTTTCGCTTC GGTTCAACCTGTTCTGAGTTTTCCATTTTGGCATCAACTTGTGATCCATTCCACTGTCTGAATTTGAACCAAACTCATCATCCGTCCAACCCTTTCTAGGAACATTCCTACCGCCTTCGTTGGGGGGATTCCACCTCCTAACATCATTCGTTGTGCGCCCTCTAGTCGTGGATCTCCATTTTGGTT]
consensusID : consensus_16190#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 567 fasta sequence
[GGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG-TTCTTCCGGCGGCGGGACGAC-TGGAGG-AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA-GGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC-GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC-TTTACCAAGCACCAATGTTGTTGA-TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCATGCCCTTGTTTGAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[+] EMBL AU094537 [GGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC TTTACCAAGCACCAATGTTGTTGA TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTAaaaa ]
[+] EMBL AU161107 [ AGNGANAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAG TGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGCCTCTACCG CCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC TTTACCAAGCACCAATGTTGTTGA TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACAaaaaaaa ]
[+] EMBL AU069248 [ AGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGNCTCTACCGCCCCTCCGGCGACCACCACCACCACTAG ]
[+] EMBL AU166194 [ AGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC NCGCGGAGACCCGCGCCGCCTTCCCGANGTNAATTGGTTTGAGC ATCTTTTACCAAGCACCAATGTTGTTGATTTTTTTCCAGTTT AGTT ]
[+] EMBL OS1398A [ AGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCNCCTNTACCGCCCCTCCGGCGACCACCACNACCACTAGATCGAGTCGGCGGCCAC GGGC ]
[+] EMBL AK059007 [ GAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC TTTACCAAGCACCAATGTTGTTGA TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGA ]
[+] EMBL OSC09271 [ AGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGN AGGCACCCGATGGTGGGGAACCANCTGCGCCACGCCACGCCGGGNCTCGNCATCNACATCNTCGCCTTCGNGATCTACCTCGTCNGCNA NGCCGC ]
[+] EMBL OSC917 [ GAGGAGGAGGAGGAGANCGGCGGCGNCGATNGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCNGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGTCACGCC GGGCTCGGCATCG CATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCC CCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGNGTCGGCNGCCACGGCG GGAGA ]
[+] EMBL CA758704 [ GAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAG TTCTTCCGGCGGCGGGACGAC TGGAGG AGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGA GGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCAC GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC TTTACCAAGCACCAATGTTGTTGA TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCATGCCCTTGTTTGAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGA ]
[-] EMBL BE040909 [ gcCGGCGGCAATGGCGAGAAAGGGTTTTACCAC ACCGGGGAGTTTCTTCCGCCGCCGGGACGACTTGAAGGAAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCGGGGGCTGGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGG GAGGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCATTAGATCGCGTCGGCGGCCAC GCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATC TTTACCAAGCACCAATGTTGTTGA TCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCATGCCCTTGTTTGAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
consensusID : consensus_16190#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 504 fasta sequence
[AGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCG-CCACGCC--ACGCC--GGGGCTC-GGCA-TC-GCCATCG-T-CGCCTTC-GGGA-TC-TACCTCGTCGGCGA-GGCCGCCTA-CAACCGCCTCTACCG-CCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTC--AAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU093284 [AGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCG CCACGCC ACGCC GGGGCTC GGCA TC GCCATCG T CGCCTTC GGGA TC TACCTCGTCGGCGA GGCCGCCTA CAACCGCCTCTACCG CCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACNCTTATAATTCTGAAGTTATGTGAATTCTTC AAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C29062 [ GCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCG CCACGCC ACGCC GGGGCTC GGNA TC GCCATCN T CGCCTTC GGGA TC TACCTCGTCGGCNA GGCCGCCTA CAACCGCCTCTACCG NCCCTCCGGCGACCACCACCACCACTAGATCGCTTCGGCGGCCACG GCGGAG ]
[+] EMBL AU030054 [ cnagttgGCGCCCACGGCNAACGCCGGGGGGTTCGGGCATTCGGCCATCGNTCCGCCTTCGGGGATTCTTACCTCGTCGGCGANGGCCGCCTANAAACCGCCTTTACCGCCCCCTCCGGNGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTC CAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU184494 [ AGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTNTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTTTGAAGTTATGTGAATTTTTCCNAAAAAAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_16190#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 480 fasta sequence
[CACGCGTCCGCCCACGCGTCCGGGCGGCGATGGCGGGNAAGGGGTTGAACGCGACGGGGNAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCNATGGTGGGGAACCAGNTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCNAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCAC-CACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAAAAAATGGAAATTGGAAGTGACACTTATAATTCTGAAGTTAAAAA]
[+] EMBL AU093153 [CACGCGTCCGCCCACGCGTCCGGGCGGCGATGGCGGGNAAGGGGTTGAACGCGACGGGGNAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCNATGGTGGGGAACCAGNTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCNAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCAC CACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTAAAAA]
[+] EMBL CF327686 [ GCGACCAC CACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAAAAAA ]
[-] EMBL CF327687 [ CGACCACACACCACCATTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCAAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAAAAAAa ]
consensusID : consensus_16190#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 471 fasta sequence
[AGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAG-TGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACAAAAAAAAAAAAAAAA]
[+] EMBL AU163856 [AGGAGGAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAG TGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACAAAAAAAAAAAAAAAA]
[+] EMBL C74251 [ GAGGAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATNGCGTCGGCGGCCAC CNCGGAGACCCG NCCGCCTCCCCGAGGTGAAGTTGTTTGGAGCAAT ]
[+] EMBL AU093285 [ GAGGAGAGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGGAGTTCTTCCGGCGGCGGGACGACTGGAGGAGGCACCCGATGGTGGGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCCATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGCCCCTCCGGCGACCACCACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCGCCGCCTCCCCGAGGTGAAG TGGTTGGAGCAATCTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATAATCCAGCATTTGAAATTTGGAA ]
consensusID : consensus_16190#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 345 fasta sequence
[AGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGTGAGTTCTTCCGGCGGCGTGGCACGACTTGGCAGGAGGCACCCTGCATGGTGTGGGAACCCAGCTTGCGCCCACGCCCACGCCTGGGTGCTCTGGCCATCGCCCATCTGTCTGCCGTTCTGGGCATCTTACCGTCGTTCTGGCTGCAGGCCTGCCGTTACACACCTGCCGTCATTACCTGCGCCCGTCCTGTGCTGCACCTACCTACCTCACCTACTCAGCATCTGCTGTCTGTGCTGTGCCCACGGCTGCTGGCAGCACCCTGCTGCCTGACGTCCGCCTGCAGTGTTGCAAGTTGTGTTT]
[+] EMBL CB964867 [AGCGGCGGCGGCGATGGCGGGGAAGGGGTTGAACGCGACGGGGTGAGTTCTTCCGGCGGCGTGGCACGACTTGGCAGGAGGCACCCTGCATGGTGTGGGAACCCAGCTTGCGCCCACGCCCACGCCTGGGTGCTCTGGCCATCGCCCATCTGTCTGCCGTTCTGGGCATCTTACCGTCGTTCTGGCTGCAGGCCTGCCGTTACACACCTGCCGTCATTACCTGCGCCCGTCCTGTGCTGCACCTACCTACCTCACCTACTCAGCATCTGCTGTCTGTGCTGTGCCCACGGCTGCTGGCAGCACCCTGCTGCCTGACGTCCGCCTGCAGTGTTGCAAGTTGTGTTT]
consensusID : consensus_16190#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 197 fasta sequence
[GCCTACAACCGCCTCTACCGCCCCTCCGGCACCACCACCACCACTAGATCGCGTCGGCACCACNCGGAGACCNNNNCCTCCCCGAAGTGAAGTAGNNGAGCAATTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTGGTTCATAAGGTTGCATGAGGCCATGACATATGTATTGCACAGGGGACTGATATGTC]
[+] EMBL D42721 [GCCTACAACCGCCTCTACCGCCCCTCCGGCACCACCACCACCACTAGATCGCGTCGGCACCACNCGGAGACCNNNNCCTCCCCGAAGTGAAGTAGNNGAGCAATTTTACCAAGCACCAATGTTGTTGATCTTTTCCAGTTGGTTCATAAGGTTGCATGAGGCCATGACATATGTATTGCACAGGGGACTGATATGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16190#1 ---------GGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGC 51
consensus_16190#2 -------------------------------------AGGAGAGCGGCGGCGGCGATGGC 23
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ----------------------------AGGAGGAGGAGGAGAGCGGCGGCGGCGATGGC 32
consensus_16190#3 --------------------------CACGCGTCCGCCCACGCGTCCGGGCGGCGATGGC 34
consensus_16190#0 GCGCGTCGAGGAGAGAGAGAGAGAGAGGAGGAGGAGGAGGAGAGCGGCGGCGGCGATGGC 60
consensus_16190#5 ------------------------------------------AGCGGCGGCGGCGATGGC 18
consensus_16190#1 GGGGAAGGGGTTGAACGCGACGGGG-GAGTTCTTCCGGCGGCGGG--ACGACTGG--AGG 106
consensus_16190#2 GGGGAAGGGGTTGAACGCGACGGGG-GAGTTCTTCCGGCGGCGGG--ACGACTGG--AGG 78
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 GGGGAAGGGGTTGAACGCGACGGGG-GAGTTCTTCCGGCGGCGGG--ACGACTGG--AGG 87
consensus_16190#3 GGGNAAGGGGTTGAACGCGACGGGG-NAGTTCTTCCGGCGGCGGG--ACGACTGG--AGG 89
consensus_16190#0 GGGGAAGGGGTTGAACGCGACGGGG-GAGTTCTTCCGGCGGCGGG--ACGACTGG--AGG 115
consensus_16190#5 GGGGAAGGGGTTGAACGCGACGGGGTGAGTTCTTCCGGCGGCGTGGCACGACTTGGCAGG 78
consensus_16190#1 AGGCACCCG--ATGGTG-GGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCC 163
consensus_16190#2 AGGCACCCG--ATGGTG-GGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCC 135
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 AGGCACCCG--ATGGTG-GGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCC 144
consensus_16190#3 AGGCACCCN--ATGGTG-GGGAACCAGNTGCGCCACGCCACGCCGGGGCTCGGCATCGCC 146
consensus_16190#0 AGGCACCCG--ATGGTG-GGGAACCAGCTGCGCCACGCCACGCCGGGGCTCGGCATCGCC 172
consensus_16190#5 AGGCACCCTGCATGGTGTGGGAACCCAGCTTGCGCCCACGC-CCACGCCTGGGTGCTCTG 137
consensus_16190#1 ATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGC--- 220
consensus_16190#2 ATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGC--- 192
consensus_16190#6 ------------------------------------GCCTACAACCGCCTCTACCGC--- 21
consensus_16190#4 ATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGC--- 201
consensus_16190#3 ATCGTCGCCTTCGGGATCTACCTCGTCGGCNAGGCCGCCTACAACCGCCTCTACCGC--- 203
consensus_16190#0 ATCGTCGCCTTCGGGATCTACCTCGTCGGCGAGGCCGCCTACAACCGCCTCTACCGC--- 229
consensus_16190#5 GCCATCGCCC-----ATCTGTCTGCCGTTCTGGGCATCTTACCGTCGTTCTGGCTGCAGG 192
* *** ** * **
consensus_16190#1 CCCTCCGGCGACCACC-ACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCG 279
consensus_16190#2 CCCTCCGGCGACCACC-ACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCG 251
consensus_16190#6 CCCTCCGGC-ACCACC-ACCACCACTAGATCGCGTCGGCACC---ACNCGGAGACCNNNN 76
consensus_16190#4 CCCTCCGGCGACCACC-ACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCG 260
consensus_16190#3 CCCTCCGGCGACCACC-ACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCG 262
consensus_16190#0 CCCTCCGGCGACCACC-ACCACCACTAGATCGCGTCGGCGGCCACGCGCGGAGACCCGCG 288
consensus_16190#5 CCTGCCGTTACACACCTGCCGTCATTAC-CTGCGCCCGTCCTGTGCTGCACCTACCTACC 251
** *** **** ** ** ** *** * * * ***
consensus_16190#1 CCGCCTCCCCGAGGTGAA---------GTGGTTGGAGCAATCTTTAC---------CAAG 321
consensus_16190#2 CCGCCTCCCCGAGGTGAA---------GTGGTTGGAGCAATCTTTAC---------CAAG 293
consensus_16190#6 C---CTCCCCGAAGTGAA---------GTAGNNG-AGCAAT-TTTAC---------CAAG 113
consensus_16190#4 CCGCCTCCCCGAGGTGAA---------GTGGTTGGAGCAATCTTTAC---------CAAG 302
consensus_16190#3 CCGCCTCCCCGAGGTGAA---------GTGGTTGGAGCAATCTTTAC---------CAAG 304
consensus_16190#0 CCGCCTCCCCGAGGTGAGCGCCCCCCCGGTGTAAAAGCTCCCCTTGTTCTCTTCCTCCGG 348
consensus_16190#5 TCACCTACTCAGCATCTG----------CTGTCTGTGCTGTGCCCACGG----CTGCTGG 297
** * * * * ** * *
consensus_16190#1 CACCAATG--------TTGTTGATCTTT---TCCAGTTTGAGTTCATAAGGTCTGCCATG 370
consensus_16190#2 CACCAATG--------TTGTTGATCTTT---TCCAGTTTGAGTTCATAAGGTCTGCCATG 342
consensus_16190#6 CACCAATG--------TTGTTGATCTTT---TCCAGTT--GGTTCATAAGGTTG--CATG 158
consensus_16190#4 CACCAATG--------TTGTTGATCTTT---TCCAGTTTGAGTTCATAAGGTCTGCCATG 351
consensus_16190#3 CACCAATG--------TTGTTGATCTTT---TCCAGTTTGAGTTCATAAGGTCTGCCATG 353
consensus_16190#0 CTGAAATGGGTTCGTTTCGTTAGATTTGGGATCGATTTGGAGGCGTTAGGGTTGTTCGGA 408
consensus_16190#5 CAGCACCC---------TGCTG--CCTGACGTCCGCCTGCAGTGTTGCAAGTTGTGTTT- 345
* * * * * ** * * **
consensus_16190#1 AG-GCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATAT 429
consensus_16190#2 AG-GCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATAT 401
consensus_16190#6 AG-GCC-ATGA----CATATGTATTGCA-CAGGGGACTGATATGTC-------------- 197
consensus_16190#4 AG-GCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATAT 410
consensus_16190#3 AG-GCCCATGACCATCATGTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATAT 412
consensus_16190#0 AGTGCTCACCTTGATCTATCTATTGGAGATTATGTAGAGCTTTTTCATGTGAAAC-AGAT 467
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 CAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAA 489
consensus_16190#2 CAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAA 461
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 CAATGTTCTGTGCTTATAATCCAGCATTTGGAAATTGGAAGTGACAAAAAAAAAAAAAAA 470
consensus_16190#3 CAATGTTCTGTGCTTATAATCCAAAAAATGGAAATTGGAAGTGACACTTATAATTCTGAA 472
consensus_16190#0 TAGTAATTTGCATATTGAAACTGTGGCGCGGGGTTGGACTGGCTAGTTGTTCGTTTGCTT 527
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 GTTATGTGAATTCTTCCATGCCCTTGTTTGAATTAAAAAAAAAAAAAAAAAAAAAAAAAA 549
consensus_16190#2 GTTATGTGAATTCTTC------------------AAAAAAAAAAAAAAAAAAAAAAAAAA 503
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 A----------------------------------------------------------- 471
consensus_16190#3 GTTAAAAA---------------------------------------------------- 480
consensus_16190#0 CCCATGACAATTCATGTTTGCTTTTTTTTTTTCAAAAGATTAGGTGTCTAATTACATGGT 587
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 AAAAACTCGAGACTAGTT------------------------------------------ 567
consensus_16190#2 A----------------------------------------------------------- 504
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GAAATATTTCATCCATAGGAATACTAAGAATGTATTTAGCACGTACGATCGGTGGAGAAC 647
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 AAAATTCTTGAGAAATGTATATACTAGGTGCCAATGAAGTCTGAACATCATTGGTTCTAG 707
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TCTTAGCATTCGTTCTGCCGTATAAGTATATACCTGCCCTAAGAAGAGGCATGTTGTGCC 767
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 AACGAAATGTATATTGATTTGGTCATCAAGTCAACACATGTGGATAGCACTTGGTAAGAT 827
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 AACTGACTGGATGGCTGGATGCCTTTCCCCTTTAGCTGCATCTTAAGCTGTGATACTTGA 887
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 AAATTGCATCTTTAATCTAGGTAGATATGTTTTACTATAACCCTAACTAGACTATCATGT 947
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GAAGCATGTTTCTGTACTATATGACATGTTGCCATCTATGTTGGAGCAAACATTATTCTT 1007
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TTCTCAGTCCTGGTTGAATTCACTTTAAGATGCAAATAAGCTTGTTTCACATAATTTAGT 1067
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATCACCTTTTTTTTCTTCCCTTTTCTGCATGATCATTGTCAGAATCTTATGTTTTTCACC 1127
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TTCTAATGTGAACTTAAGAACTTGTCAGTGCACCACTATTTTTTTGCATTGTGTTAGATA 1187
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTTGAGTTACATAGTTAGGAGGTGTCCTTTTTCTGTGCATTGTGGTGAAATGAGAGCCAA 1247
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CATCCTTGCCGAAGTTACTCTAACTTTAGCATTGTTTGCTGTCACACGCCACTGTCTTCC 1307
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CAGACTTCCATAAGTCGATTATCCTCTGGCAGATTCATTTGATCATTTCATACGGATTAG 1367
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TGTTTTAATTTGAAAGGGGCAACTTCTAACAAAGGCATAGTTACATTTTATGATAAGTAG 1427
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TTAGATGCCCATGTTGCAACGGGATCGAAAGATAGAAATATGATTCAGTCTCTCTATACC 1487
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CGTTTTTCACAAAGAGTTGGGTTTTGGGTTTGTTTAGAGCAGTTTTTTATACCTCTCCTT 1547
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 AATGGAAATCGTGGAATCTATAGTTTATATCAATTAAGGAAGTCACTTCAAAATCTGGTT 1607
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TTCTGAAGATGTATTCTTTTGTGATTAAGCTTTTTATGTATTTTTTTTTATATGTTTTGC 1667
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATGCATGATTAGTTCCCTCCAACATTGCTCAAGCACATCGGCGGAGGAGCTAAAGCAAAG 1727
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TTCTGCGCTGTTTGTTGTCCTATGTCTATTGCACTCCCTGGTATTTCCGTGATTAATTGC 1787
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTAACAGGTGTATTATGTGCTGCAGGTGAAGTGGTTGGAGCAATCTTTACCAAGCACCAA 1847
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TGTTGTTGATCTTTTCCAGTTTGAGTTCATAAGGTCTGCCATGAGGCCCATGACCATCAT 1907
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GTAATTTGCAACCAGGGAGACATGAATCATGTACTTTTATATCAATGTTCTGTGCTTATA 1967
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATCCAGCATTTGGAAATTGGAAGTGACACTTATAATTCTGAAGTTATGTGAATTCTTCCA 2027
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TGCCCTTGTTTGAATTATGACCTGCACTACCTGATCAGTGCAACCAAGATAACTTTCAGA 2087
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TAAAAACTACCAAATCCGCGATGCGCTTGATTGATCAGCCTTGTTGGTTTGGCCTTTTTT 2147
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATATGGAAGTCAGCAAGGCGATGATTTCTGCGTTGCGTCGCATAATCTGAACAAAAGCAA 2207
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GTGGCGTGTGCTGTACACTGCTATTGAACAGATGAATGGGTTGTACTCCTAGAAGTTAGT 2267
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTGCACAGGGCGTGTGTTATTTGTTTATCATCATTGTAAAATACTAGTACTACATTTCAT 2327
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTTTCTATCAGAAGAAGAAAAAAAGAACTACATTTCATTTGATTCCCTCAGCCTCCGAGA 2387
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GTTGTGCAATTCTGACGTTGGGCGTAGCGAGTACCCGTCTCCCCTGCGCTGTCCTCCATT 2447
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 TCTGCTCATCCTGTAGCTATCATCCTCACTGCCGATTTCTCTGTTGCTGTCCATAGCATC 2507
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CAACAATCTCGCGGCTCCATTGCTACCCCTCCTGAATCTCCCATTCATGCCATCTCCATC 2567
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 GCTACCCCTCCTGAATCTCCCATTCATGTCATCGATGTACTCTCTGTTGCCAATGTTCAT 2627
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CCTAGCTCCACTCTTTCTTCCTGGCTTCCATTTTGGCTCCTCCAAGTCTGAGGCGAAGCG 2687
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATTAACAAACCGATCTCTTCTTCCATCACCATCGTTGCCTGCTCCACTCTTTCTTCTTGG 2747
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTTCCATTCTGGCTCCTCCAAATCTGAGGCGAAGCGATTAACAAACCGATCTCTTCTTCC 2807
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CTCACCATCGCTGCCCCTCATGTACCTCCTAGTCCTCTCCCCATTGTTGGTATTAGCCAT 2867
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 ATATTTCAGCTCCGGTCTATCTCTGCCATTTTCGCTTCGGTTCAACCTGTTCTGAGTTTT 2927
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CCATTTTGGCATCAACTTGTGATCCATTCCACTGTCTGAATTTGAACCAAACTCATCATC 2987
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 ------------------------------------------------------------
consensus_16190#2 ------------------------------------------------------------
consensus_16190#6 ------------------------------------------------------------
consensus_16190#4 ------------------------------------------------------------
consensus_16190#3 ------------------------------------------------------------
consensus_16190#0 CGTCCAACCCTTTCTAGGAACATTCCTACCGCCTTCGTTGGGGGGATTCCACCTCCTAAC 3047
consensus_16190#5 ------------------------------------------------------------
consensus_16190#1 --------------------------------------------
consensus_16190#2 --------------------------------------------
consensus_16190#6 --------------------------------------------
consensus_16190#4 --------------------------------------------
consensus_16190#3 --------------------------------------------
consensus_16190#0 ATCATTCGTTGTGCGCCCTCTAGTCGTGGATCTCCATTTTGGTT 3091
consensus_16190#5 --------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||