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Oryza sativa
cluster # 16228 cluster # 16228       Sequences # 30       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16228#0 length = 1117 sequences # 28  
consensus_16228#1 length = 510 sequences # 1  
consensus_16228#2 length = 503 sequences # 1  

consensusID : consensus_16228#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 28
consensus length = 1117
fasta sequence
                              [AGATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT-GGGGAGTTCAGT-GATTTCCA-GGAGATTTTGCGCTA-TTT-GGAT-GAATTAACCCTGT-CCGAT-CATATGT-GGGATGATGGAAACT-CC-TTGGGTCCCAAGGAGGT-CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA-CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC-TGAA-T-GGCGCGA-GGA-CATGACA-TTTGAGGAAGC-TGTCAAGCTT-G-TTGA-GAAGTGC-TTGC-TTGTCCTGC-TGTACCGTGA-CCGATCATC-TA-TTAACA-AGTTCCAGA-TTGCCAAGAT-CACAACTGA-GGGA-GCGACCA-TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT-CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AB026568             [AGATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACATTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA   AAAAAAAAAAAAAAAA                  ]
[+] EMBL OS1253A              [AGATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCNAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTNACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGNGCGTGGAGCGNATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK071380             [ GATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTG                                                ]
[+] EMBL AU165944             [              CGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCA TATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGTGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAANT GGGGAGTTCAGTGGATTTCCAGGGAGATTTTGCGCTA TTTGGGATGGAATTAACCCTGT CCGAT CATATGTGGGGATGATGGAAACT CC TTGGGTCCCAANGAGGT CCATAGCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU068925             [                 CCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK103975             [                   GAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGC                                                                                                                                        ]
[+] EMBL CF326425             [                       CAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C74209               [                         AACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGANGACGCA TATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGA CNCATTAANGCTGTTGGTAAGCATAGCCTTATTGGAGCNAGT TGGGAGTTCAGT GATTTCCA NGAGA TTTGCGC A ATT GGAT GAA TAA CCTGT CCG T CATATGT GGGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA753134             [                             TAAATCCCTCG  GAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAA         GGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCANAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATGGGTACACACTTTGAAGAAAA CACATTG CA CTGGGTTTGGGAA CATATGGCAATCCC ATACTcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU068248             [                                     TCGGAGAGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU163324             [                                           AGAGAGAGAGATAGAGAGGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGGAGTTCAGT GATTTCCA GGAGATTTTTCGCTATTTT GGAT GAATTAACCCTGTCCCGATCCATATGTGGGGATGATTGGAACT CCTTTGGGTCCCAAGGAGGTCCCATAGCTACCTNACGNGAGTTATGTACAACAGGCGC ACAAGTTTGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK104212             [                                                                                      GAAGAAATCATGGCGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTG                                                ]
[+] EMBL AU161549             [                                                                                                           CAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAANT NGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT TGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAAGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACANGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU031340             [                                                                                                                                                                                                                                                                       GCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATNTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGANGCCTTGTGAAATGTTTTAT                                                                                                                                                                    ]
[+] EMBL AU031341             [                                                                                                                                                                                                                                                                                                                       nCTGTTGGTAAGCATANCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTCCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGATTGATGTACAACAGGCGCAACAAGTTTGANCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACT GGGNTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACAaaaa                                                                                                                         ]
[+] EMBL C73351               [                                                                                                                                                                                                                                                                                                                                       GCCTTATTGGAGCAAGT GGGGAGTTCAGT GATTTCCA GGAGATTTTGCGCTA TTT GGAT GAATTAACCCTGT CCGAT CATATGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGNTTGGGAACCATATGGCAATCCCAATACTTCGTACTTGAATT NGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU068926             [                                                                                                                                                                                                                                                                                                                                                                                                                 CTGTCCCGAT CATATGT GGGATGATGNAAACTCCC TTGGGTCCCAAGGAGNC CCATAGCTACCTGACGAGAGTGATGTACAACA GCGCAACAAGTTTGATCCCCTCTGNAACTCCCTTGTAATTGGTGGGTTGAAAAAGGGTCCAAAGGTTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACT GGGNTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA   AAAAAAAA                          ]
[+] EMBL OSS11314A            [                                                                                                                                                                                                                                                                                                                                                                                                                                TGT GGGATGATGGAAACT CC TTGGGTCCCAAGGAGGT CCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTACTTGAA T GGCGCGAGGGACCATGACA TTTGAGGGAGCTTGTCAAGTTTNGTTTGAGGAAGTGCTTTGCTTTGTCCTGCTTGTACCGTGACCCGATCATCTTATTTAACA AGTTTCAGATTTGCC AGATCCAC ACTTAGGGGAGGCGGCCATTTTACCCGGCATATTCAT                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF309063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTGGATTTCTACCTT CTGTGGCCGTTAAaaaa                                                                             ]
[+] EMBL AU165646             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAACAAGTTTGATCCCNTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAAAGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACCACATTGCCA CTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCANAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGANAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCAA   AAAAAAAAAAAAAAAAAAAAAAAA          ]
[+] EMBL BI798246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              acacCAC CTTTGAGGAAAACCAC TTCCCACCTGGTTTTGGGAACCATATGGCAATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAA C TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGC ACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA   AAAAAA                            ]
[+] EMBL AU161550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CA CTGGGTTTGGGACCCATATGGCAACCCCAATA TTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTNCCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACT GGGNTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTAaaaaa                                                                                              ]
[+] EMBL BI799661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATAT GCCATCCCAATACTTCGTAC TGAA T GGCGCGA GGA CATGACA TTTGAGGAA C TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TT CCAAGAT CAC ACTGA GGGA GCGACCA TCTACCC CCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCT CAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGA GCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGT C ACTTAGATTTCTACCTTCCTGTGCCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA   AAAAAA                            ]
[+] EMBL BI796792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCAATCCCAATACTTCGTAC TGAA T  GCGCGA GGA CATGACA TTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACACAGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTTCGA   AAAAAAAAA                         ]
[+] EMBL BI797585             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cgtTAC TGAA TGGGCGCGA GGA CATGACATTTTGAGGAAGC TGTCAAGCTT G TTGA GAAGTGC TTGC TTGTCCTGC TGTACCGTGA CCGATCATC TA TTAACA AGTTCCAGA TTGCCAAGAT CACAACTGA GGGA GCGACCA TCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGGCCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGC ACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTAaaaa                                                             ]
[-] EMBL CA999614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGGGTGCGGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTCTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATGAT                                                         ]
[+] EMBL AU031118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTNTGCTGCAGAGGCTGAATGTCAGGCCATGANCCAGGATGAAGAANCAGGCTCTGTTGCTGAGAGGCCTTGTNAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTNGATTTNTACCTT CTGTGGCCGTTAAGCCTGGAACTATNTTATATATGATGAAAGTCTGTTTTGTTTCGANNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU163323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    nAAATGTTTTATNTGAACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTNTACCTT CTGTGGCCGTTAAGCCTGGAACTATATTATATATNATGAAAGTCTGTTTTGTTTCGA   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]


>consensus_16228#0 AGATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGA GGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACG GATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGA GGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTG TCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGG AGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGAGTTCAGTGATT TCCAGGAGATTTTGCGCTATTTGGATGAATTAACCCTGTCCGATCATATGTGGGATGATG GAAACTCCTTGGGTCCCAAGGAGGTCCATAGCTACCTGACGAGAGTGATGTACAACAGGC GCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAA AGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAACC ACATTGCCACTGGGTTTGGGAACCATATGGCAATCCCAATACTTCGTACTGAATGGCGCG AGGACATGACATTTGAGGAAGCTGTCAAGCTTGTTGAGAAGTGCTTGCTTGTCCTGCTGT ACCGTGACCGATCATCTATTAACAAGTTCCAGATTGCCAAGATCACAACTGAGGGAGCGA CCATCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCGCTGCCTTTGAAAATCCGG CCCAGGGTGCTGTAGGATCATGGTAGATTTATTTATGCTGCAGAGGCTGAATGTCAGGCC ATGAACCAGGATGAAGAAACAGGCTCTGTTGCTGAGAGGCCTTGTGAAATGTTTTATCTG AACATCAATGAAACTCCAGATTTGCTTTGTATGACATTCTGATCGTGCAACTTAGATTTC TACCTTCTGTGGCCGTTAAGCCTGGAACTATATTATATATGATGAAAGTCTGTTTTGTTT CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16228#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence
                              [CAGATTCTTGCGGCGATTCATCTTCCGTTCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTACCTGATTTTTTTTCCCTTGGATTCCGCAGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCGTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGAGTTCAGTGATTTCCAGGAGATTTTGCGCTATTTGGATGAATTAACCCTGTCCGATCATATGTGGGATGATGGAAACTCCTTGGGTCCCAAGGAGGTCCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGT]

[+] EMBL CF309062             [CAGATTCTTGCGGCGATTCATCTTCCGTTCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTACCTGATTTTTTTTCCCTTGGATTCCGCAGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCGTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGAGTTCAGTGATTTCCAGGAGATTTTGCGCTATTTGGATGAATTAACCCTGTCCGATCATATGTGGGATGATGGAAACTCCTTGGGTCCCAAGGAGGTCCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGT]


>consensus_16228#1 CAGATTCTTGCGGCGATTCATCTTCCGTTCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTT ACCTGATTTTTTTTCCCTTGGATTCCGCAGTGGCAGCAACCCATGGACGGATCCCACGCG AGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTAT CCGTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTGTCATCATGGCA TCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGGAGCGCATTAAG GCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGAGTTCAGTGATTTCCAGGAGATT TTGCGCTATTTGGATGAATTAACCCTGTCCGATCATATGTGGGATGATGGAAACTCCTTG GGTCCCAAGGAGGTCCATAGCTACCTGACGAGAGTGATGTACAACAGGCGCAACAAGTTT GATCCCCTCTGGAACTCCCTTGTAATTGGT



consensusID : consensus_16228#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 503
fasta sequence
                              [AAACCCAACCATTCCCCACCTTGGGTTTTGGAACCAATATGCCAATCCCAATACTTCGGTACTGAATGGGCCGCGAGAACATGGACAATTTGAGGAAAGCTGTCAAGCTTGCTTTGAGAAGTGCTTGCTGGTCCTGCTGTACCGTGCACCGATCATCTATTAACAAGTTCCAGATGCCCAAGATCACAACTGAGGGAGCGACCATCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCACTGCCATTTGAAAATCCGCACCAGGGTCCCTGTAGGATCATGGTAGATTTATTTATGCTCCAGAGGCTGAATGTCAGCCATGAACCAGGATGAAGAACACAGGCTCTGTTCTGAGAGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGGACATTCTGATCGCCAACTTAGATTTCCTCACCTTCTGGGCCGTTAAGCCGGGAACTATATTATATAGGAGGAAAGTCTGTTTGTTTCC]

[+] EMBL BI796842             [AAACCCAACCATTCCCCACCTTGGGTTTTGGAACCAATATGCCAATCCCAATACTTCGGTACTGAATGGGCCGCGAGAACATGGACAATTTGAGGAAAGCTGTCAAGCTTGCTTTGAGAAGTGCTTGCTGGTCCTGCTGTACCGTGCACCGATCATCTATTAACAAGTTCCAGATGCCCAAGATCACAACTGAGGGAGCGACCATCTACCCGCCATACTCATTGAAGACTTACTGGGGCTTCACTGCCATTTGAAAATCCGCACCAGGGTCCCTGTAGGATCATGGTAGATTTATTTATGCTCCAGAGGCTGAATGTCAGCCATGAACCAGGATGAAGAACACAGGCTCTGTTCTGAGAGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGGACATTCTGATCGCCAACTTAGATTTCCTCACCTTCTGGGCCGTTAAGCCGGGAACTATATTATATAGGAGGAAAGTCTGTTTGTTTCC]


>consensus_16228#2 AAACCCAACCATTCCCCACCTTGGGTTTTGGAACCAATATGCCAATCCCAATACTTCGGT ACTGAATGGGCCGCGAGAACATGGACAATTTGAGGAAAGCTGTCAAGCTTGCTTTGAGAA GTGCTTGCTGGTCCTGCTGTACCGTGCACCGATCATCTATTAACAAGTTCCAGATGCCCA AGATCACAACTGAGGGAGCGACCATCTACCCGCCATACTCATTGAAGACTTACTGGGGCT TCACTGCCATTTGAAAATCCGCACCAGGGTCCCTGTAGGATCATGGTAGATTTATTTATG CTCCAGAGGCTGAATGTCAGCCATGAACCAGGATGAAGAACACAGGCTCTGTTCTGAGAG CCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTGTATGGACATT CTGATCGCCAACTTAGATTTCCTCACCTTCTGGGCCGTTAAGCCGGGAACTATATTATAT AGGAGGAAAGTCTGTTTGTTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16228#0      AGATCGAAGCATCGCGCCCGAGCCAAACCTAAATCCCTCGGAGAGAGAGAGAGATAGAGA 60
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      GGAGGAAAAAATCAAATCTTTTTGAGGAAGAAATCATGGCGTGGCAGCAACCCATGGACG 120
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      GATCCCACGCGAGCGGGAGCAAGGCGGCGGCGGCGGTGGCGGATGGCCCGGGAACCCAGA 180
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      GGACGCAGTATCCTTATGTGACTGGCTCATCAATTATTGCACTGAAATACAAGGATGGTG 240
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      TCATCATGGCATCCGACACTGGAGCCTCATATGGCTCAACTTTGCGATACAAGAGCGTGG 300
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      AGCGCATTAAGGCTGTTGGTAAGCATAGCCTTATTGGAGCAAGTGGGGAGTTCAGTGATT 360
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      TCCAGGAGATTTTGCGCTATTTGGATGAATTAACCCTGTCCGATCATATGTGGGATGATG 420
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      GAAACTCCTTGGGTCCCAAGGAGGTCCATAGCTACCTGACGAGAGTGATGTACAACAGGC 480
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      GCAACAAGTTTGATCCCCTCTGGAACTCCCTTGTAATTGGTGGGGTGAAAAAGGGTCCAA 540
consensus_16228#2      ------------------------------------------------------------
consensus_16228#1      ------------------------------------------------------------
                                                                                   

consensus_16228#0      AGGGTGAAGAGAAATATCTTGGCATGGTTAACATGATTGGTACACACTTTGAGGAAAAC- 599
consensus_16228#2      --------------------------------------------------AAACCCAAC- 9
consensus_16228#1      -------------------------------------CAGATTCTTGCGGCGATTCATCT 23
                                                                               * * 

consensus_16228#0      --CACATTGC-CACTGGGTTTGGGAACCA-TATGGCAATCCCAATACTTCG-TACTGAAT 654
consensus_16228#2      --CATTCCCCACCTTGGGTTTTGGAACCAATATGCCAATCCCAATACTTCGGTACTGAAT 67
consensus_16228#1      TCCGTTCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTACCTGATTTTTTTTCCCTTGGAT 83
                         *      *    *   * *         * *    * *  * *  **      ** **

consensus_16228#0      G----G--CGCGAGGAC--ATGAC---ATTTGAGGAA-GCTGT--CAAGCTTG--TTGAG 698
consensus_16228#2      G----GGCCGCGAGAAC--ATGGACA-ATTTGAGGAAAGCTGT--CAAGCTTGCTTTGAG 118
consensus_16228#1      TCCGCAGTGGCAGCAACCCATGGACGGATCCCACGCGAGCGGGAGCAAGGCGGCGGCG-G 142
                                **    **  ***     **   * *   ** *   ****   *    * *

consensus_16228#0      AAGTGCTTGCTTGTCCTGCTGTACCGTG-ACCGATCATCTAT---TAACAAGTTC-CAGA 753
consensus_16228#2      AAGTGCTTGCTGGTCCTGCTGTACCGTGCACCGATCATCTAT---TAACAAGTTC-CAGA 174
consensus_16228#1      CGGTGGCGGATGGCCCGGGAACCCAGAGGACGCAGTATCCGTATGTGACTGGCTCATCAA 202
                         ***   * * * ** *     * * * **  *  ***  *   * **  * **    *

consensus_16228#0      TTGCCAAGATCACAACTGAGGGAGCGACCATCTACCCGCCATACTCATTGAAGACTTACT 813
consensus_16228#2      TGCCCAAGATCACAACTGAGGGAGCGACCATCTACCCGCCATACTCATTGAAGACTTACT 234
consensus_16228#1      TTATTGCACTGAAATACAAGGATGGTGTCATCATGGCATCCGA--CACTGGAGCCTCA-T 259
                       *        * * *    ***  *    ****    *  *  *  ** ** ** ** * *

consensus_16228#0      GGGGCTTCGCTGCC-TTTGAAAATCCGGCCCAGGGTGC-TGTAGGATCATGGTAGATTTA 871
consensus_16228#2      GGGGCTTCACTGCCATTTGAAAATCCGCACCAGGGTCCCTGTAGGATCATGGTAGATTTA 294
consensus_16228#1      ATGGCTCAACTTTGCGATACAAGAGCG---TGGAGCGCATTAAGGCTGTTGGTAAGCATA 316
                         ****   **      *  **   **     * *  * *  *** *  *****    **

consensus_16228#0      TTTATGCTGCAGAGGCTGAATGTCAGGCCATGAACCAGGATGAAGAA-ACAGGCTCTGTT 930
consensus_16228#2      TTTATGCTCCAGAGGCTGAATGTCAG-CCATGAACCAGGATGAAGAACACAGGCTCTGTT 353
consensus_16228#1      GCCTTATTGGAGCAAGTG---GGGAGTTCAGTGATTTCCA-GGAGATTTTGCGCTATTTG 372
                           *  *  **    **   *  **  **   *     * * ***      *** * * 

consensus_16228#0      GCTGAGA-GGCCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTG 989
consensus_16228#2      -CTGAGA-G-CCTTGTGAAATGTTTTATCTGAACATCAATGAAACTCCAGATTTGCTTTG 410
consensus_16228#1      GATGAATTAACCCTGTCCGAT--CATATGTGGG-ATGATGGAAACTCC----TTGGGTCC 425
                         ***     ** ***   **    *** **   ** *  ********    ***  *  

consensus_16228#0      TATG-ACATTCTGATCGTGCAACTTAGATTTCT--ACCTTCTGTGGCCGTTAAGCCTGGA 1046
consensus_16228#2      TATGGACATTCTGATCGC-CAACTTAGATTTCCTCACCTTCTG-GGCCGTTAAGCCGGGA 468
consensus_16228#1      CAAGGAGGTCCATAGCTACCTGACGAGAGTG----ATGTACAACAGGCGCAA---CAAGT 478
                        * * *  * *  * *   *     *** *     *  * *    * **  *   *  * 

consensus_16228#0      ACTATATTATATATGATGAAAGTCTGTTTTGTTTCGAAAAAAAAAAAAAAAAAAAAAAAA 1106
consensus_16228#2      ACTATATTATATAGGAGGAAAGTCTGTTTGTTTCC------------------------- 503
consensus_16228#1      TTGATCCCCTCTGGAACTCCCTTGTAATTGGT---------------------------- 510
                          **    * *   *      * *  **  *                            

consensus_16228#0      AAAAAAAAAAA 1117
consensus_16228#2      -----------
consensus_16228#1      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)