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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1521 fasta sequence
[AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGAAAATCCAGTGGATGGTTTGGAAGGCTGGAAGAGTGAAGAAGGTATATACATTAAGAAGTCACAGAACTACTCACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT-ACATG-AGCAGTATCTGTATTTACA-CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC-TGCTCTT-TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC---ACTACAGAACACACTACTCTCTTAGA-GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA-TGCATATGCATTCCC-TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA-ACTGAACGCAGGCGT-ACGTCT-GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC-TCCGTGTCCACCAGCACTCGCTG-CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC-GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGTTGAACTGAAAACCTGCGGCGTACGT]
[+] EMBL CB628375 [AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGAAAATCCAGTGGATGGTTTGGAAGGCTGGAAGAGTGAAGAAGGTATATACATTAAGAAGTCACAGAACTACTCACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCC ]
[-] EMBL BM038056 [ tttttttttTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAAAGAGAGTATAT ACATG AGCAGNATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACGNGGTCTTGGGTATAGTAATATTCTACACATACAAATNGNATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCCGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTNCCTACGTACACTGCATATGCATTCCCGTGACATGTGGCTAGCTATANCTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGACACTGAACGCAGGCGT ACGTCTGGGGACTgtg ]
[-] EMBL BQ907475 [ ttttTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGG GTCTCGTTCAG ]
[-] EMBL BM419815 [ taAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATAACATGAAGCAGTATCTGTATTTACACCGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGG CCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGTAACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGG GTCTCGTTCAGGAATGCCCAGCTGCTTCCGTGTCCACCAGCACTCGCTGTCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGTTGATGACGATGGTCGCCGGCTGTGAGGAGCCG CGGCGA GGTGGGTCGCTGTGGGAGTACGANTG ]
[+] EMBL CB629112 [ tACACAATTAACTATCTATATAGGAGAGACTCGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCGA CCCTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTC ]
[-] EMBL CB658310 [ ATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTC TAGAGGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGAT ]
[-] EMBL CB658249 [ tTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTC CTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGTTGAACTGAAAACCTGCGGCGTACGT]
consensusID : consensus_16236#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1300 fasta sequence
[TTTTTTTTTTTTTTAACAGGGCAAATGATTTTTAGTTTTTTAC--ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG-ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC-GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT---AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGT]
[+] EMBL CF278295 [TTTTTTTTTTTTTTAACAGGGCAAATGATTTTTAGTTTTTTACATATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGC ]
[-] EMBL AU222485 [ TTTTTGAAACAGTGCAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCT ]
[+] EMBL CB664244 [ CAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACGCACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACaa ]
[+] EMBL CB661900 [ CAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACG ]
[+] EMBL CB666014 [ CAAATGATTTTTAGTTTTTCCC TTATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAACCGCCc ]
[+] EMBL CB645105 [ GATTTTTAGTTTTTTAC ATACCTATATATATATATCATANATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACCCAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGG ]
[-] EMBL CB645104 [ ATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCAGGGAGT ]
[-] EMBL CB666206 [ CTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC ]
[-] EMBL CB628374 [ GACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAAAGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCATCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGGAGTATTCAATTCTCAGGTCGAGATGGAC ]
[-] EMBL CB666013 [ AGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGA ]
[-] EMBL CB653073 [ ACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGGGACGGCGTCTCGTTCAGGAATGCCCAGCGGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAGGTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTC ]
[-] EMBL AU100998 [ GACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGCCGGCTCGCTGTGGAAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGC GCCCGGAGA GCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ]
[-] EMBL CB664243 [ CCGGCGTGAGGAGCCGCCGGCGACGGGGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAAGGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTG ]
[-] EMBL CB629111 [ GCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAAAGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCATCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGT]
[-] EMBL AU063443 [ CGANCGGCGAGGTGGTGACGTTGGGCTCCGACG ACGTCGACGACNACGGTGGCTGCTTCCGTTG TGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ]
[-] EMBL OSC103351 [ CGTTNGGCTCCGACGAACGTCGACGACGATGGTGGNTGCTTCCGTTTNTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATNNGAGAACCCATCTCTNAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ]
consensusID : consensus_16236#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1278 fasta sequence
[TTTTTTTTTTTTTTTTTTTAGTTTTTTACATATATATATATATATATCATA--CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATG]
[-] EMBL AU100999 [TTTTTTTTTTTTTTTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTTCGGCGACNGGGTCTNGTTCANGAATGCCCAACTGCTTCGTGTCCACCAGCACTTGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGnc ]
[+] EMBL CB658250 [ tcTTTTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTAC ]
[-] EMBL AK099709 [ tgaTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATG]
[-] EMBL CB661899 [ ATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATCCATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGC ]
[+] EMBL CB666207 [ TATATATATATATCATACCCCTTA AAGGCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGACAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTC ]
[+] EMBL CB665454 [ AGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTC CTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGG ]
consensusID : consensus_16236#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATA]
[-] EMBL CF278294 [ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16236#0 AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGA 60
consensus_16236#2 -----------------------------------------------------------T 1
consensus_16236#1 -----------------------------------------------TTTTTTTTTTTTT 13
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 AAATCCAGTGGAT--GGTTTGGAAGGCTGGAAGAGTGAAGA-AGGTAT-ATACATTAAGA 116
consensus_16236#2 TTTTTTTTTTTTT--TTTTTAGTTTTTTACATATATATATATATATATCATACATTAAGA 59
consensus_16236#1 TAACAGGGCAAATGATTTTTAGTTTTTTACATATATATATATATATATCATACATTAAGA 73
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 AGTCACAGAACTACTCACACACACACACA--AAGTACAGTCTTAACACAATTAACTATCT 174
consensus_16236#2 AGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCT 119
consensus_16236#1 AGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCT 133
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 234
consensus_16236#2 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 179
consensus_16236#1 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 193
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 294
consensus_16236#2 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 239
consensus_16236#1 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 253
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTAC---AGAACACACT 351
consensus_16236#2 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACT 299
consensus_16236#1 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACT 313
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 411
consensus_16236#2 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 359
consensus_16236#1 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 373
consensus_16236#3 -------------ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 47
***********************************************
consensus_16236#0 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 470
consensus_16236#2 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 418
consensus_16236#1 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 432
consensus_16236#3 CCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 107
* **********************************************************
consensus_16236#0 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 530
consensus_16236#2 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 478
consensus_16236#1 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 492
consensus_16236#3 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 167
************************************************************
consensus_16236#0 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 590
consensus_16236#2 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 538
consensus_16236#1 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 552
consensus_16236#3 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 227
************************************************************
consensus_16236#0 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 650
consensus_16236#2 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 598
consensus_16236#1 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 612
consensus_16236#3 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 287
************************************************************
consensus_16236#0 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 710
consensus_16236#2 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 658
consensus_16236#1 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 672
consensus_16236#3 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCC 347
**************************************************** ** *
consensus_16236#0 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 770
consensus_16236#2 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 718
consensus_16236#1 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 732
consensus_16236#3 GT-------TGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGT--CAGCGAGCG-- 396
** ** **** * * * *** ***** * ** **
consensus_16236#0 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 830
consensus_16236#2 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 778
consensus_16236#1 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 792
consensus_16236#3 GTTCCTCATCA-GCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCA 455
* **** *** * ** * * * ** * * ******
consensus_16236#0 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 889
consensus_16236#2 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 837
consensus_16236#1 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 851
consensus_16236#3 TCAGAGAACCCATCTCTGATAGG-AGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAG 514
* * ** * * * * ** *** ** ** * ** * * *
consensus_16236#0 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 949
consensus_16236#2 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 897
consensus_16236#1 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 911
consensus_16236#3 TGATGGATGA-GAAATGATGATA------------------------------------- 536
* * * ** *** *
consensus_16236#0 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACG 1009
consensus_16236#2 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTG------------------- 938
consensus_16236#1 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACG 971
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 ACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 1069
consensus_16236#2 ----------------------CTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 976
consensus_16236#1 ACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 1031
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 GCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTA 1129
consensus_16236#2 GCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTA 1036
consensus_16236#1 GCGAGCGGTTCCTCATCAGCCGAACTTTCTTCT-CATCACCAAG---AACTGGTGAGTTC 1087
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 CAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGA 1189
consensus_16236#2 CAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGA 1096
consensus_16236#1 CAG---------CCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGT 1138
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 AATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAAT--TTGTTGCAT 1247
consensus_16236#2 AATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAAT--TTGTTGCAT 1154
consensus_16236#1 CGAGATGGACAAAGAAAGTG-ATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCA 1197
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 GTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATC 1307
consensus_16236#2 GTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATC 1214
consensus_16236#1 GTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACA---CATCCAGTGTTGGGGCTCGC 1254
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 TCTGATAGGAG-TATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAA 1366
consensus_16236#2 TCTGATAGGAG-TATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAA 1273
consensus_16236#1 TCCACTAGGAGCTGATGGAGCAACAAGT-GAGCTGTAGCACACAGGT------------- 1300
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 TGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCA 1426
consensus_16236#2 TGATG------------------------------------------------------- 1278
consensus_16236#1 ------------------------------------------------------------
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 TACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTA 1486
consensus_16236#2 ------------------------------------------------------------
consensus_16236#1 ------------------------------------------------------------
consensus_16236#3 ------------------------------------------------------------
consensus_16236#0 GCACACAGGTTGAACTGAAAACCTGCGGCGTACGT 1521
consensus_16236#2 -----------------------------------
consensus_16236#1 -----------------------------------
consensus_16236#3 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||