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Oryza sativa
cluster # 16246 cluster # 16246       Sequences # 30       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16246#0 length = 1517 sequences # 24  
consensus_16246#1 length = 843 sequences # 4  
consensus_16246#2 length = 189 sequences # 1  
consensus_16246#3 length = 186 sequences # 1  

consensusID : consensus_16246#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 1517
fasta sequence
                              [CACTAACCCTCAAACTAACGTACTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGCGCGCAGTGCTACGGCGTGACGCGCGTCTGCGGCCGCGGCCGGCGCCGCCACCCCAACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA-CGACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT-AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGCTGCTTGTTCTCCCGAAAAAAAAAGGGA]

[+] EMBL CB650585             [CACTAACCCTCAAACTAACGTACTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGCGCGCAGTGCTACGGCGTGACGCGCGTCTGCGGCCGCGGCCGGCGCCGCCACCCCAACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAATAAGCGCGCCGTCCTGATCGGCATCACCTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAACGCTTCGGCTTCCCCAACTACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGCTGGCGACGAAGGACAACATCAGGATGGCGATGAACTGGCTGGTGCACGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCACGTGCCGGACGA CGACGGCTACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB665834             [   aacaagcCATACTAACGTAGTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGCGCGCAGTGCTACGGCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB636262             [                                                                                                                                                                                                                                  ACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAAGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAACTCCCGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB617903             [                                                                                                                                                                                                                                  ACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA754419             [                                                                                                                                                                                                                                  ACCCGGTCGAGACGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAAGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGATGCAACTCCGTTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGATG CGGACGACCAACGAC ACTAGGTGGAC GGTACGAC AAGCGATCTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB652552             [                                                                                                                                                                                                                                  ACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA CGACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCCACGAGGCCATCGTCCGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB681613             [                                                                                                                                                                                                                                  ACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA CGACGGCGACTAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCAAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB675076             [                                                                                                                                                                                                                                  ACCCGGTCGAGCCGTGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGCAAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAGCTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA CGACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB647273             [                                                                                                                                                                                                                                                                                                                                                                                                  CAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTCGGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA CGACGGCGACGAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCC                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB655060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGGCCTTGTGCAGGTTGGCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGTGACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGA CGACGGCGACGAGGTGGACGGGTACGACAAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATCCTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCACGCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAAGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF325417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCG                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB681614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTCTCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGGGGTGTGAATTGTGTCTAATGTCTACTTGGAGTAA  AAAAAAga                                  ]
[-] EMBL CB680494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCNTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGAATATACTTGGTTTTCATCCATGGATTATCCCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAAGGTCTACTTGGAGTAATGA                                         ]
[-] EMBL CB679223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCNTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAAAGGCTGTTGTGTGAATTGTGTAAAGGGTCTACTTGGAGTAATGAACAAATGTTTCTGC                           ]
[-] EMBL CB647274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTTTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATG                                  ]
[-] EMBL CB620943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAAGGAACAAATGTTTCTGCTGCTT                      ]
[-] EMBL CB655061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGAAGGAATGAACAAATGTTTCTGCTG                         ]
[-] EMBL CB617904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAAGGAACAAATGTTTCTGCTGCTTGTTCTCCCGAAAAAAAAAGGGA]
[-] EMBL CB665002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCACCGCCCGCCCACCGGGGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTTTTCAGCGGGTGCAGCGACGGCAACAACAAGCATAGCCTGTTGCCGGAGGCGTTGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGTTCACCACCATGAGGAGCATCATGCGGGACGGCGGGGTCACCTGCAACCTGCAGGGCCCCATTGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTTTTGCTTTGAGATGTTTGACATTTTCCGCAAGCCGTTTGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTTCCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATTTCAGCTTAGTTTGGGTCACACAGACAAGGTTCTGGAGCTTTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATTCCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTTTAATGTTTACTTGGAGGGATGAACAAATGTTTTTTCTGCTgaaaaaaaa              ]
[-] EMBL CB648311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCAGGCCATGCTCTTCAGCGGGTGCAGGGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGGAATGAACAAATGTTTCTGCTGC                        ]
[-] EMBL CB636263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCTTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACTTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTTTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTTTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAA                                    ]
[-] EMBL CB650586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATTGGCGCCCCCATCCGCAAGGTTGCCAAATTCAGCGGCATCCAGGAGCCTAACCTGTCTTGGTTTGAGATGTTTGACATTTACCGCAAGCCGTTTGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTCCCGAAATAAACTGCGAATCGATCGAATATTGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATTGTGTGAGAAAATCGTCATGTATTTCAGCTTAGTTTGGCTCACACAGACAAGGTCCTGGAGCTTTAGAAGAAGCCTATACTTGGTTTTCATCCATGGATTATTCCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTTTAATGTTTTCTTGGAGTAATGAACAAATGTTTATGGTGCTT                      ]
[+] EMBL CB685936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCTCTAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAA                                    ]
[+] EMBL BM419539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACCAATGTTTNTGCTa                         ]


>consensus_16246#0 CACTAACCCTCAAACTAACGTACTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCAC TTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGG CACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGCGCGCAGTGC TACGGCGTGACGCGCGTCTGCGGCCGCGGCCGGCGCCGCCACCCCAACCCGGTCGAGCCG TGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGC AAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAG CTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTC GGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTG GCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGT GACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGACGACGGCGAC GAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATC CTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCAC GCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTC TCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAG GGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCAT AGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTG GAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGC GACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCC AACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGC AAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTAT TATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAA CTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTT AGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCAT CCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAAGGCTGTT GTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGCTGCTTGTTCT CCCGAAAAAAAAAGGGA



consensusID : consensus_16246#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 843
fasta sequence
                              [AGACTAACAAGCAAACTAACGTAGTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAA-A-GC-TGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGCTGCT]

[+] EMBL CB648310             [AGACTAACAAGCAAACTAACGTAGTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAA A GC TGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGCTGCT]
[-] EMBL CB645824             [                                                                                          TGGCGGCGGTTGCGGCGCGGTGCGGTGCAGGCACTGCAGCGCGTCCCTCCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCGGGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAAGN GC TGTTGTGTGAATTGTGTCTAATGTCTACTT TAGAAGTGAACAAATGTTTCTGCTGCT]
[-] EMBL CB665835             [                                                                                                                                              GCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAA A GCATGTGGTGTGAATTGTGTCTAATGTCTACTTGGAGTAA AAATAAAag           ]
[-] EMBL CB675077             [                                                                                                                                                GGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACATTATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTAATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTATCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAATAA AGGC TGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGC    ]


>consensus_16246#1 AGACTAACAAGCAAACTAACGTAGTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCA CTTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAG GCACTGCAGCGCGTCCCTCCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGC GCCTACAAGGGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAAC AACAAGCATAGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATC AAGGCGGTGGAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGC ATCATGCGCGACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGC AAGGTCGCCAACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGAC ATCTACCGCAAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACACCATGGACAATAACAT TATTATTATTATTGTACCGAAATAAACTGCGAATCGATCGAATATCGAATCGGTCGGCTA ATTAATTAACTAGTATTGGGTTAAATAGTTTGTGTCATCGTGTGAGAAAATCGTCATGTA TCTCAGCTTAGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAGACTATACTT GGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCACTGTTGTAAT AAAGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTCTGCT GCT



consensusID : consensus_16246#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 189
fasta sequence
                              [AGAGGACGAGACAAGGGGGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCCCTGTTGTAATAAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTTTGCTGCTTGTTCTCCCGAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760567             [AGAGGACGAGACAAGGGGGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCCCTGTTGTAATAAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAATGTTTTTGCTGCTTGTTCTCCCGAAAAAAAAAAAAAAAAAAAAAA]


>consensus_16246#2 AGAGGACGAGACAAGGGGGAAGAAGACTATACTTGGTTTTCATCCATGGATTATACCTTC CTTGAGCCTGCTAGCTGTGGCTCCCTGTTGTAATAAGGCTGTTGTGTGAATTGTGTCTAA TGTCTACTTGGAGTAATGAACAAATGTTTTTGCTGCTTGTTCTCCCGAAAAAAAAAAAAA AAAAAAAAA



consensusID : consensus_16246#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 186
fasta sequence
                              [CCCGACAACCATGGACAAATAACAATGTATTAATTATTACTTGTACCGAAATAATACCTGCGAATCGACTCTGAATACTCGAATCAGGTCGGCTAATTAATTAACTAGATATGTGGGTTAAATAGTTTGTGTCATCGTGTGACGCAAAATCGTCATGTATCTCAGCTTTAGTCTGGCTCACACAGA]

[+] EMBL BI811185             [CCCGACAACCATGGACAAATAACAATGTATTAATTATTACTTGTACCGAAATAATACCTGCGAATCGACTCTGAATACTCGAATCAGGTCGGCTAATTAATTAACTAGATATGTGGGTTAAATAGTTTGTGTCATCGTGTGACGCAAAATCGTCATGTATCTCAGCTTTAGTCTGGCTCACACAGA]


>consensus_16246#3 CCCGACAACCATGGACAAATAACAATGTATTAATTATTACTTGTACCGAAATAATACCTG CGAATCGACTCTGAATACTCGAATCAGGTCGGCTAATTAATTAACTAGATATGTGGGTTA AATAGTTTGTGTCATCGTGTGACGCAAAATCGTCATGTATCTCAGCTTTAGTCTGGCTCA CACAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      CACTAACCCTCAAACTAACGTACTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCAC 60
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      TTCGGCGGACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGG 120
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      CACTGCAGCGCGTCCCTCCCGGCTATGCCTGGCGCCCGCGTCATCCAGTGCGCGCAGTGC 180
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      TACGGCGTGACGCGCGTCTGCGGCCGCGGCCGGCGCCGCCACCCCAACCCGGTCGAGCCG 240
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      TGGCGCCCGGCCGTGCCGATGCCCGTGGCCGGCGGCGGCTTCTTCCCGGGCTCCCGCGGC 300
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      AAGAAGCGCGCCGTCCTGATCGGCATCACGTACGCCGGCATGCGGCGGCGCGGCAGCCAG 360
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      CTGATGAGGGGCCCCGTCAACGACGTCAAGTGCATGCGGTACCTCCTCTGCGAGCGCTTC 420
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GGCTTCCCCAACGACTGCGTCCTCATCCTCACCGACGAGGAGAAGGACCCGTGCAGGTTG 480
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GCGACGAAGGAGAACATCAGGATGGCGATGAACTGGCTGGTGCAGGGGTGCAGCTCCGGT 540
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ------------------------------------------------------------
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GACTCGCTGGTGTTCCACTTCTCCGGGATCGGGGTGCAGGTGCCGGACGACGACGGCGAC 600
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ---------------------------------------------------AGACTAACA 9
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GAGGTGGACGGGTACGACGAGGCGATCTGCCCCATGGACTCGTTCAGCCAGGGCCCCATC 660
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      AGCAAACTAACGTAGTTGCTAGCTAGCTCTAGCTATCTCGGCAATGGATCACTTCGGCGG 69
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      CTGGACGACGAGATCAACGAGGCCATCGTCCGCCCGCTCGTCCACGGCGCCAAGCTCCAC 720
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      ACGTGCTCTCGGCTTCGGCGGTGGCGGCGGCTGCGGCGCGGTGCGGTGCAGGCACTGCAG 129
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GCCGTCGTCGACGCCGAGCACAGCTCCACCGTCCTCGACCTCCCCTTCCTCTGCTGCCTC 780
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      CGCGTCCCTCCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAG 189
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      TCGTCCAGGTCCGGCGGCTGGCAGTGGGAGGACCACCGCCCGCCCACCGGCGCCTACAAG 840
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      GGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCAT 249
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GGCTCCAGCGGCGGCCAGGCCATGCTCTTCAGCGGCTGCAGCGACGGCAACAACAAGCAT 900
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      AGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTG 309
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      AGCCTGCTGCCGGAGGCGTCGACGGTGGGGGCCATGACGCACAGCTTCATCAAGGCGGTG 960
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      GAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGC 369
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GAGTGCGAGCCGCGCGCCACCTACGGCAGCCTGCTCACCACCATGAGGAGCATCATGCGC 1020
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      GACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCC 429
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      GACGGCGGCGTCACCTGCAACCTGCAGGGCCCCATCGGCGCCCCCATCCGCAAGGTCGCC 1080
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      AACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGC 489
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      AACTTCAGCGGCATCCAGGAGCCTAACCTGTCTTGCTCTGAGATGTTCGACATCTACCGC 1140
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      AAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACA-CCATGGACAA-TAACATTAT---T 544
consensus_16246#3      ----------------------------CCCGACAACCATGGACAAATAACAATGTATTA 32
consensus_16246#0      AAGCCGTTCGTCCTGTAAAACCGCTAGGCCCGACA-CCATGGACAA-TAACATTAT---T 1195
consensus_16246#2      ------------------------AGAGGACGAGA--CAAGGGGGAAGAAGACTAT---A 31
                                                     *** *  ** **   *  ** * * *    

consensus_16246#1      ATTATTA-TTGTACCGAAATAAA--CTGCGAATCGATC--GAATA-TCGAATC-GGTCGG 597
consensus_16246#3      ATTATTACTTGTACCGAAATAATACCTGCGAATCGACTCTGAATACTCGAATCAGGTCGG 92
consensus_16246#0      ATTATTA-TTGTACCGAAATAAA--CTGCGAATCGATC--GAATA-TCGAATC-GGTCGG 1248
consensus_16246#2      CTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCCCTGTTG- 90
                        **  *  *  * *    ** *   ** *     *      *    * *   *  ** * 

consensus_16246#1      CTAATTAATTAACTAG-TAT-TGGGTTAAATAGTTTGTGT-CATCGTGTGA--GAAAATC 652
consensus_16246#3      CTAATTAATTAACTAGATATGTGGGTTAAATAGTTTGTGT-CATCGTGTGACGCAAAATC 151
consensus_16246#0      CTAATTAATTAACTAG-TAT-TGGGTTAAATAGTTTGTGT-CATCGTGTGA--GAAAATC 1303
consensus_16246#2      -----TAATAAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAAT 145
                            **** *    * * * **  **   *    *** * * * * ** *   * **  

consensus_16246#1      GTCATGTATCTCAGCTT-AGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAG 711
consensus_16246#3      GTCATGTATCTCAGCTTTAGTCTGGCTCACACAGA------------------------- 186
consensus_16246#0      GTCATGTATCTCAGCTT-AGTCTGGCTCACACAGACAAGGTCCTGGAGCTCTAGAAGAAG 1362
consensus_16246#2      GTTTTTGCTGCTTGTTC--TCCCGAAAAAAAAAAAAAAAAAAAAAA-------------- 189
                       **  *   *    * *     * *    * * * *                         

consensus_16246#1      ACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCAC 771
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      ACTATACTTGGTTTTCATCCATGGATTATACCTTCCTTGAGCCTGCTAGCTGTGGCTCAC 1422
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      TGTTGTAATAAAGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAAT 831
consensus_16246#3      ------------------------------------------------------------
consensus_16246#0      TGTTGTAATAAGGCTGTTGTGTGAATTGTGTCTAATGTCTACTTGGAGTAATGAACAAAT 1482
consensus_16246#2      ------------------------------------------------------------
                                                                                   

consensus_16246#1      GTTTCTGCTGCT----------------------- 843
consensus_16246#3      -----------------------------------
consensus_16246#0      GTTTCTGCTGCTTGTTCTCCCGAAAAAAAAAGGGA 1517
consensus_16246#2      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)