These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16314#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 1237 fasta sequence [GAGTAGAAAAGCGTCCTCAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG-TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT-CGCCTCCA-TCGCGCCCT-TC-GGCAACGCCGAG-GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC--GGCGCCGTGATCGACTACATC-AACTTCC-AGTTCTACGCCTACGGCGCCAGCACGA-CGGAGGCGCA-GTACGTCGACTTCTTCAACCA-GCAGATCGTC-AA-CTACCCCGGA-GGGAACATCCTTGCGAGCTTCACGA-CGGCGGCGACGACGACCTCGGTGCCC-GTCGA-GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT-GCTGATCATTCCAGGAG--CCA-AGGGTTCAAGTATGA-GACAGAATCGCAAGCA-CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA-AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT-ATGTTGTGTATGTCATTATTGGATTGTTCCTGTTTTAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF316348 [GAGTAGAAAAGCGTCCTCAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCC ] [+] EMBL CF315864 [ AGAAAAGCGTCCTCAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACC ] [+] EMBL CF337130 [ CTCAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCAC ] [+] EMBL AK071453 [ CAACCAATCAATTGCAAGCAATTTCTCCATCACAGGAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTATTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT ATGTTGTGTATGTCATTATTGGATTGTTCC ] [+] EMBL CF318031 [ CAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATC ] [+] EMBL CF319630 [ CAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCAT ] [+] EMBL AF350426 [ gggCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAAaaaaaaaaa ] [+] EMBL CA755375 [ ATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCCCAGCTCATTGCTGTAGACCTCCTCCCGGTCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGGAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCCACGTGAGGGTGGCCGACAGCATGGGCGGCGCCCCCGTGAACGACCGCCCGGGCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCA CGGGATCATCCAGGACAAC ACCTGGACGGGATCGACATCCACTACCAGCAGTTCCAGGGCGAAACGGACACCTTCACCGAGTGCGTCGGGCGCCTCATCACGGGGGTCAAGGGCAAGGGGGTGAACAAGAT CGCCTCCC TCGCGCCCT TT GGGGAAACCCAG GGCCAGCGGCCTTACATGTGGCTGTGGGCCAAATACCAGGC CCG GATCGAATACATC AACTT C AGGTCTACGC ] [+] EMBL CB654207 [ CTCCATCACATAAATCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCTGCGCCATCTTCAACGGCGTGAAATTCACCGACGTGCCAATCAATCCTAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCGATGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAAGACAACAACCTGTACGGCATCAACATCGACTACGAGCAAATCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGACAAagag ] [+] EMBL AU062762 [ TCCATCACAGAAGTCACCAATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCNTCNCGGCCCTTNTGGCCTTNCAAGCTCCAATGGCCACGGCAGTAAACTNCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATNAATCCGAAAGTCCGGTTCGACTTCATCNTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGNCGACCCNGACCAACGGCAAGTTCAACATCTTTTGGCA ] [+] EMBL CF296494 [ CCTCCTCCCGGCCCTTCTGGCCTTCCAAGCTCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCG ] [+] EMBL CB629889 [ ACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAATGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCTTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGGATCTTCATCT ] [+] EMBL AK061215 [ GGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGATCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT ATGTTGTGTATGTCATTATTGGATTGTTCC ] [+] EMBL AF330230 [ AACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCCCGGTCTTCTTCAACATCACCTCCGTCGACTCG TGGGTAAACAACGCTGTCGAGTCCCTCACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAA ] [-] EMBL CB629890 [ GGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAGGTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAGGGGGTGATCAAGTT CGCCTCCA TCGCGCCCT TC GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTGCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCTACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATGAGAGATAAAACCCCACCCGTGTTATACGTACAAAAATaag ] [+] EMBL BI812079 [ gaCTCA GCCCA GGGGTGATTCAGTTCCCCCTCC TCGCGCCCTGTC GGCAATCCCGA GTCCAGCGCCATTACATGGC CTGTGGCCCAAGTAC GGC CCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCCCA GTACGTCGACTTCTTCAACCA CAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTGCTGGCTAATGCCACCATCAATTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAAC AAGATCACA AGAGCTGTACTATGAAAATAAGCTACTCAAATTTGAAATACGAATTTGAATTAGCATCTAaaaaaaaaa ] [-] EMBL CF317674 [ GTGATCAAGTT CGCCTCCA TCGCGCCCT TG GGCAACGCCGAG GTCCAGCGCCATTACATGGCGCTGTGGGCCAAGTAC GGCGCCGTGATCGATTACATC AACTTCC AGTTTTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAACAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTAaaaaa ] [+] EMBL BM421521 [ ctAGTT CGCCTCCAGTCGCGCCCT TCGGGCTACNCCGAGTGTCCAGC CCATTACATGGCNCTGT GGCCAAGTAC GGCGCCGTGATCGACTACATCGAACTTCC AGTT TACGCNTACGGCGCCAGCACGAGCGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AAGCTACCCCGGA GGGAACATCCTTGCGAGCTTCACGAGCGGCGGCGACGACGACCTCGGTGCCCAGTCGAGGACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAATCTGTACGGCATCTTCATCT GGCTGGCTGATCATTCCAGGAGNCCCANAGGGTTCAAGTATGATGACAGAATCGCAAGCA CTGCTGGCTAATGCCACCATCAAGTACTAG TAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCTACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATAa ] [+] EMBL BI812037 [ TT CGCCTCCA TCGCGCCCT TC GGCAAC CCGAG GTCCAGCGCCATTACATGGC CTGT GGCCAAGTAC GGCGCCGTGATCGACTACATC AACTTCCAAGTTCTACGCCTACGGCGCCAGCACGA CGGAGGC CA GTACGTCGACTTCTTCAACCACGCAGATCGTCAAA CTACCCCGGAGGGGAACATCCTTGCGAGCTTCACGA C GC GCGACGACGACCTCGGTGCCC TCGA GACGGCGCTGAGCGCTT CCGGACTCTGCAGAAGGAGGGGAA CTGTACGGCATCTTCATCT GGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCACCTGCTGGCTAATGCCACCATCAATTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAAC AAGATCACA AGAGCTGTACTATGAAAATAAGCTACTCAAATTTGAAATACGAATTTGAATTAGCATCTAaaaaaaaaa ] [-] EMBL CF319631 [ CATGGCGCTGTGGGCCAAGTAC AGCGCCGTGATCGACTACATC AACTTCC AGTTCTACGCCTACGGCGCCAGCACGA CGGAGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAaaaaaa ] [-] EMBL CF315865 [ CACGA CGGGGGCGCA GTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCACCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCAaaaaa ] [+] EMBL CA752768 [ ccgcccggGCAGGTACGTCGACTTCTTCAACCA GCAGATCGTC AA CTACCCCGGA GGGAACATCCTTGCGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGG ] [-] EMBL CF296493 [ TCCTTTGGAGCTTCACGA CGGCGGCGACGACGACCTCGGTGCCC GTCGA GACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCCAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT ATGTTGTGTATGTCATTATTGGATTGTTCCTGTTTTAAAAAA ] [+] EMBL BI812381 [ GA GACGGC CTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCC AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTGCTGGCTAATGCCACCATCAATTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACCAAGATCACACAGAGCTGTACTATGAAAATAAGCTACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCCACCGTGTTATACGTACAGACATGCTTGATGTTGTGTATGTCATTATTGGATTGTTCCTGTTTTGTTGAAAAA ] [-] EMBL CF316349 [ CCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTTCACATTTTTAAACAAAGATCACA AGAGCTGTACTATGAAAATAAGCAACTCAAATTTGAAATAaaaaaaaa ] [-] EMBL OS38160 [ caaGGGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTGCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTGCT GCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATTATTGTTca ] [+] EMBL CB839816 [ GGAAGCTGTACGGCATCTTCATCTGGGCT GCTGATCATTCCAGGAG CCA AGGGTTCAAGTATGA GACAGAATCGCAAGCA CTTCTGGCTAATGCCACNATCAGTTACTAGCTAGTAGCTAGTTTTCTTTGCTGCATTATTGTTTCACATTTT ACAAAGATCACA AGCTGTACTATGAAAATAAGCA ] [+] EMBL CF327691 [ TGAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT ATGTTGTGTATGTCATTATTGGATTGTTCCTGTTTAAAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CF327690 [ GAAAATAAGCAACTCAAATTTGAAATACGAATTTGAATTAGCATTTAGTATATATTTAGCCGTGCATCATTCCAGGTGGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTT ATGTTGTGTATGTCATTATTGGATTGTTCCTGTTTAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_16314#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence [TNCNAANTTNGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCTTCCAAGCTCCAATGGCCACGGAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGAAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCACCGTTGAACGACCGCCCGGTTTTCTTNAACATTAACTTCGTCGANTTGTGGGGTAAACAACGTTGT] [+] EMBL C26523 [TNCNAANTTNGCAAGCAATTTCTCCATCACAGAAGTCACCAATGGGCTCCGCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCTTCCAAGCTCCAATGGCCACGGAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAACGGCGTGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCGCCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAGTTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGCAGAGAAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCACCGTTGAACGACCGCCCGGTTTTCTTNAACATTAACTTCGTCGANTTGTGGGGTAAACAACGTTGT] consensusID : consensus_16314#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 396 fasta sequence [ACCCGAGGTTCCAGCCGCCATTAACATGGCACCTTTGGCCACAAATGTACAGGCACGTGTATCGATGACATCAACTTCCAGTTTTACGCCTACGGCTCCAAGCACGACGGAGGCCCACGTACGTCGACTTCTTCAACCCGCAAGATCGGTCAACTACCCCGGAGGGAACATCCTTGCGAGCGTTCACGACGGCGGCGACGACGACCTCGGTGCCCGTCGAGACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAACTGTACGGCATCTTCATCTGGCCTCTGATCATTCCAGGAGCCACAGGGTTCAAGTATGAGACAGAATCGCAAGCACTGCGTGGCTAATGCCACCCAGTCAAATTACTAGCTAGTAGCTAGTTTTGTTTGCTGCA] [+] EMBL BI807534 [ACCCGAGGTTCCAGCCGCCATTAACATGGCACCTTTGGCCACAAATGTACAGGCACGTGTATCGATGACATCAACTTCCAGTTTTACGCCTACGGCTCCAAGCACGACGGAGGCCCACGTACGTCGACTTCTTCAACCCGCAAGATCGGTCAACTACCCCGGAGGGAACATCCTTGCGAGCGTTCACGACGGCGGCGACGACGACCTCGGTGCCCGTCGAGACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAACTGTACGGCATCTTCATCTGGCCTCTGATCATTCCAGGAGCCACAGGGTTCAAGTATGAGACAGAATCGCAAGCACTGCGTGGCTAATGCCACCCAGTCAAATTACTAGCTAGTAGCTAGTTTTGTTTGCTGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16314#0 GAGTAGAAAAGCGTCCTCAACCAATCAATTGCAAGCAATTTCTCCATCACAGAAGTCACC 60 consensus_16314#1 ------------------TNCNAANT--TNGCAAGCAATTTCTCCATCACAGAAGTCACC 40 consensus_16314#2 -----------------ACCCGAGGTTCCAGCCGCCATTAACATGGCACCTTTGGCCACA 43 * * ** ** * * * * *** consensus_16314#0 AATGGGCTCCGCCAAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGCCTTCCAAGC 120 consensus_16314#1 AATGGGCTCCGC-AAGCTCATTGCTGTAGTCCTCCTCCCGGCCCTTCTGGC-TTCCAAGC 98 consensus_16314#2 AATGTAC--AGGCACGTGTATCGATGACATCAACTTCCAG-----TTTTACGCCTACGGC 96 **** * * * * ** * ** ** * *** * * * * ** consensus_16314#0 TCCAATGGCCACGGCAGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAA 180 consensus_16314#1 TCCAATGGCCACGG-AGTAAACTCCAACCTCTTCCGGGACTACATCGGCGCCATCTTCAA 157 consensus_16314#2 TCCAAGCACGACGG-----AGGCCCACGTACGTC---GACTTCTTCA-----ACCCGCAA 143 ***** * **** * *** * ** **** * ** * * *** consensus_16314#0 CGGCG-TGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCG 239 consensus_16314#1 CGGCG-TGAAGTTCACCGACGTGCCAATCAATCCGAAAGTCCGGTTCGACTTCATCCTCG 216 consensus_16314#2 GATCGGTCAACTACCCCGGAGGGAACATCCTTGCGAGCGTTCACGACGGCGGCGACGACG 203 ** * ** * * *** * * *** * *** ** * ** * * * ** consensus_16314#0 CCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAG---- 295 consensus_16314#1 CCTTCATCATCGACTACACCACCGAGACGAACCCGCCGACCCCGACCAACGGCAAG---- 272 consensus_16314#2 ACCTCGGTGCCCGTCGAGACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAC 263 * ** * * ** * * **** * * * * ** * consensus_16314#0 --TTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGC 353 consensus_16314#1 --TTCAACATCTTCTGGCAGAACACGGTGCTCACCCCGTCGGCCGTCGCGTCGATCAAGC 330 consensus_16314#2 TGTACGGCATCTTC-ATCTGGCCTC--TGATCATTCCAGGAGCCACAGGGT---TCAAGT 317 * * ******* * * * * ** *** ** *** * ** ***** consensus_16314#0 AGAGCAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCCACCGTGAACGACCGCC 413 consensus_16314#1 AGAGAAACCCCAACGTGAGGGTGGCCGTCAGCATGGGCGGCGCACCGTTGAACGACCGCC 390 consensus_16314#2 AT-GAGACAGAATCGCAAGCACTGC-GTGGCTA---ATGCCACCCAGTCAAATTACTAGC 372 * * ** * ** ** ** ** * * * * ** ** * consensus_16314#0 CGGTCTTCTTCAACATCACCTCCGTCGACTCGTGGG-TAAACAACGCTGTCGAGTCCCTC 472 consensus_16314#1 CGGTTTTCTTNAACATTAACTTCGTCGANTTGTGGGGTAAACAACGTTGT---------- 440 consensus_16314#2 TAGTAGCTAGTTTTGTTTGCTGCA------------------------------------ 396 ** * ** * consensus_16314#0 ACCGGCATCATCCAGGACAACAACCTGGACGGCATCGACATCGACTACGAGCAGTTCCAG 532 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 GTCGACCCGGACACCTTCACCGAGTGCGTCGGCCGCCTCATCACGGTGCTCAAGGCCAAG 592 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 GGGGTGATCAAGTTCGCCTCCATCGCGCCCTTCGGCAACGCCGAGGTCCAGCGCCATTAC 652 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 ATGGCGCTGTGGGCCAAGTACGGCGCCGTGATCGACTACATCAACTTCCAGTTCTACGCC 712 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 TACGGCGCCAGCACGACGGAGGCGCAGTACGTCGACTTCTTCAACCAGCAGATCGTCAAC 772 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 TACCCCGGAGGGAACATCCTTGCGAGCTTCACGACGGCGGCGACGACGACCTCGGTGCCC 832 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 GTCGAGACGGCGCTGAGCGCTTGCCGGACTCTGCAGAAGGAGGGGAAGCTGTACGGCATC 892 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 TTCATCTGGGCTGCTGATCATTCCAGGAGCCAAGGGTTCAAGTATGAGACAGAATCGCAA 952 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 GCACTTCTGGCTAATGCCACCATCAGTTACTAGCTAGTAGCTAGTTTTGTTTGCTGCATT 1012 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 ATTGTTTCACATTTTTAAACAAAGATCACAAGAGCTGTACTATGAAAATAAGCAACTCAA 1072 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 ATTTGAAATACGAATTTGAATTAGCATCTAGTATATATCTAGCCGTGCATCATTCCAGCT 1132 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 GGAATTTAAGATAAAACCCCAACCGTGTTATACGTACAGACATGCTTATGTTGTGTATGT 1192 consensus_16314#1 ------------------------------------------------------------ consensus_16314#2 ------------------------------------------------------------ consensus_16314#0 CATTATTGGATTGTTCCTGTTTTAAAAAAAAAAAAAAAAAAAAAA 1237 consensus_16314#1 --------------------------------------------- consensus_16314#2 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||