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Oryza sativa
cluster # 1639 cluster # 1639       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1639#0 length = 867 sequences # 2  

consensusID : consensus_1639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 867
fasta sequence
                              [CGGCGACGGCGGCGGCGCAAGAACGAGTCGTACGTGTGCTTCGCCGGCAATGGAGGTCCACGGCGCGGCGAGCAGGGAGCAGCAGCAGCACGACGGCGGCGGCGGCGGGGTGAAGGTGAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCGGCCAGCTTCAAGGCCGTCGTGCAGCGGCTCACGGGCCAGTCCGCGCCCTCGCCTTCGGCGCCGGCGACCTCGGCGAGGCCGAGCAGGCCGCGCGCGCGCGCCGCGGTCACGGCTTGCCCGGCGGCCGCCGTGGGGTGGGCGGGCGGCTACGGCGGCGGCAGCGGCCTGATGACGATGGCCGCGCCGGTGAAGCAGGAGGCGGCGGCGCCGCCTCCCAACCTTGAGGATCTCCACGAGCTCCGCGACTTCTCCGACCTGTTCTACCCGACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGCTACCCGTACTACTGATCGAGTCGTGCTGGCGCGTACAGCGCATCTTTGATTTTCTCTTTTCTTTTTTGTTGGTTTTAGCAGTCGTGCCGTGATTGCCAGTCGCCATTGTTGTGCCGATCAACCTGGACGGAGCTCCTCTGATGTAGAGTCAGAAGGAGGTGGGTCACTGACCGGTGGGGCTCACCTTCATAGGCCCATACGTCATTGACCATGTTCCTCTAACTTTACGTCAGAGGAGCCTCTTCTGATCAACATTAGGATGTCTGCTGGAATACTAGTATATGTATATCATAGGCTATAACTACGTGATCTGTTCATCTCTACATCTCAAACACATTGCGTGTTCTTCAAACTTCACAGAAATGGAGAATGGATGATACAGAAACTGATTTTACTCA]

[+] EMBL CB642203             [CGGCGACGGCGGCGGCGCAAGAACGAGTCGTACGTGTGCTTCGCCGGCAATGGAGGTCCACGGCGCGGCGAGCAGGGAGCAGCAGCAGCACGACGGCGGCGGCGGCGGGGTGAAGGTGAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCGGCCAGCTTCAAGGCCGTCGTGCAGCGGCTCACGGGCCAGTCCGCGCCCTCGCCTTCGGCGCCGGCGACCTCGGCGAGGCCGAGCAGGCCGCGCGCGCGCGCCGCGGTCACGGCTTGCCCGGCGGCCGCCGTGGGGTGGGCGGGCGGCTACGGCGGCGGCAGCGGCCTGATGACGATGGCCGCGCCGGTGAAGCAGGAGGCGGCGGCGCCGCCTCCCAACCTTGAGGATCTCCACGAGCTCCGCGACTTCTCCGACCTGTTCTACCCGACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGCTACCCGTACTACTGATCGAGTCGTGCTGGCGCGTACAGCGCATCTTTGATTTTCTCTTTTCTTTTTTGTTGGTTTTAGCAGTCGTGCCGTGATTGCCAGTCGCCATTGTTGTGCCGATCAACCTGGACGGAGCTCCTCTGATGTAGAGTCAGAAGGAGGTGGGTCACTGACCGGTGGGGCTCACCTTCATAGGCCCATACGTCATTGACCATGTTCCTCTAACTTTACGTCAGAGGAGCCTCTTCTGATCAACATTAGGATGTCTGCTGGAATACTAGTATATGTATATCATAGGCTATAACTACGTGATCTGTTCATCTCTACATCTCAAACACATTG                                                           ]
[-] EMBL CB642204             [                                                                                                                                                                                                                                                                                                                                                                                                 CACGAGCTCCGCGACTTCTCCGACCTGTTCTACCCGACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGCTACCCGTACTACTGATCGAGTCGTGCTGGCGCGTACAGCGCATCTTTGATTTTCTCTTTTCTTTTTTGTTGGTTTTAGCAGTCGTGCCGTGATTGCCAGTCGCCATTGTTGTGCCGATCAACCTGGACGGAGCTCCTCTGATGTAGAGTCAGAAGGAGGTGGGTCACTGACCGGTGGGGCTCACCTTCATAGGCCCATACGTCATTGACCATGTTCCTCTAACTTTACGTCAGAGGAGCCTCTTCTGATCAACATTAGGATGTCTGCTGGAATACTAGTATATGTATATCATAGGCTATAACTACGTGATCTGTTCATCTCTACATCTCAAACACATTGCGTGTTCTTCAAACTTCACAGAAATGGAGAATGGATGATACAGAAACTGATTTTACTCA]


>consensus_1639#0 CGGCGACGGCGGCGGCGCAAGAACGAGTCGTACGTGTGCTTCGCCGGCAATGGAGGTCCA CGGCGCGGCGAGCAGGGAGCAGCAGCAGCACGACGGCGGCGGCGGCGGGGTGAAGGTGAA GTTCATCGAGACGCAGTTCGTCAGCTCCGACGCGGCCAGCTTCAAGGCCGTCGTGCAGCG GCTCACGGGCCAGTCCGCGCCCTCGCCTTCGGCGCCGGCGACCTCGGCGAGGCCGAGCAG GCCGCGCGCGCGCGCCGCGGTCACGGCTTGCCCGGCGGCCGCCGTGGGGTGGGCGGGCGG CTACGGCGGCGGCAGCGGCCTGATGACGATGGCCGCGCCGGTGAAGCAGGAGGCGGCGGC GCCGCCTCCCAACCTTGAGGATCTCCACGAGCTCCGCGACTTCTCCGACCTGTTCTACCC GACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGCTACCCGTACTA CTGATCGAGTCGTGCTGGCGCGTACAGCGCATCTTTGATTTTCTCTTTTCTTTTTTGTTG GTTTTAGCAGTCGTGCCGTGATTGCCAGTCGCCATTGTTGTGCCGATCAACCTGGACGGA GCTCCTCTGATGTAGAGTCAGAAGGAGGTGGGTCACTGACCGGTGGGGCTCACCTTCATA GGCCCATACGTCATTGACCATGTTCCTCTAACTTTACGTCAGAGGAGCCTCTTCTGATCA ACATTAGGATGTCTGCTGGAATACTAGTATATGTATATCATAGGCTATAACTACGTGATC TGTTCATCTCTACATCTCAAACACATTGCGTGTTCTTCAAACTTCACAGAAATGGAGAAT GGATGATACAGAAACTGATTTTACTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)