These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16396#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1547 fasta sequence [CTTTTTTTTTTTTTTTGCTGAACTGAAAGT-CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC-AACAGGGAAGCAACATCCA-TTTCTTTCAGTAAC-TTTAC-TTTCATAC-ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC-TTC-TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA-TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA-CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC-AGGATT-CTCGTCAATAATCATGAACTCTTCTACC-AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC-GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC] [+] EMBL CB643941 [CTTTTTTTTTTTTTTTGCTGAACTGAAAGT CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCC ] [+] EMBL CB658985 [ cccTTTTTT TGAACTGAAAGT CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCCAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCCATGTCGATAAATGCAC ] [+] EMBL CB643076 [ ACTGAAAGT CCAACTACAACTTTGACTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCACTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGC ] [-] EMBL BE228440 [ AAAGTCCCAACTACAATTGGGCCTCTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAAACAGGGAAGCAACATCCATTTTCTTTCAGTAACTTTTACTTTTCATACNACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTTCTTTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCNTAAGATGCCNTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCA ] [-] EMBL AU223183 [ TTTTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAANGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTANATCGNGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTA TTCATCTGNGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAANATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCNAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTANAAAGACTAACACGGCCTCTTTC ] [-] EMBL CB658437 [ GTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTT ] [-] EMBL CB643075 [ TATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTGGTGGT ] [-] EMBL CB657196 [ ATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGT ] [-] EMBL CB642222 [ GAGGACAAGCCTGCCTGTTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGA ] [-] EMBL CB657025 [ GGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTG ] [-] EMBL CB643379 [ ACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGT ] [-] EMBL CB658984 [ GAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGgg ] [-] EMBL BF430748 [ CTTTGTCAAGCAGTTCTTCAGCAGTTG TTTCGATGACACTTGTGAAGATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTATGTTTCCACCCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTAGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGT ] [-] EMBL OSC104631 [ AAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTTAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAANAAAGCAGTAGACNACGATTGGATnantc ] [-] EMBL AU174262 [ TTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCG ] [-] EMBL OSS4377A [ GTTTCATCACCAAGGATTCCCCGNAAATAATCATGAACTCTTCTACCAAAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATNTCGGTGGACTCNACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGNCNCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATNCGCTCACGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCNCNGNTNGC NCGCGGGGC GCGCCG ] [-] EMBL AU197854 [ CCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCNCCGCGGGGCGGCGCCGCGGCGCGCCGGAGANCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC] consensusID : consensus_16396#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1463 fasta sequence [TCCCNTCTTNTNCGAAAGTCCAACTACAATGGGCCTTGGGAGGCTTTCTGAAGTGTTTTTTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG--TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT-GCCTTTTAG-A-TCGTGGGAAA-ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG-CTTGAGCTATCCTC-TGCCT-GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG-ATTGCGAATCATGT-CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA-CTGTCGAGATGT-CCGCAACAC-GGTCA-TGACT-AATCTGGCTGACA-T-GGAGAA---GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAAACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTGGTCCCGCACACCAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT] [-] EMBL BM420450 [TCCCNTCTTNTNCGAAAGTCCAACTACAATGGGCCTTGGGAGGCTTTCTGAAGTGTGGACAACTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACNCA TGATGGATACAAGCACAGATCGAAGATGGGAAA GG TGGAATACAATAGGTCTTCTTCAT GCCTTTTAGCACTCGTGGGAAACATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTCGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCC ] [-] EMBL AU197855 [ TTTTTTTTTTT TTTGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAN A TCGNGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTATTCATCTGNGGTTTGCCCTTCTCCCGAGCCCTCANAAGGNGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTT ] [-] EMBL AU032569 [ TTTTTTTTTTT TTTGGGAAGCAACANCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGANGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATNGCCTCNGACTTGAGCTATCCTC TGCCTGGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGCATNGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGANAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAA ] [-] EMBL BM422061 [ TTTTTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGTACACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CGGAACACGGGTCAc ] [-] EMBL BI809275 [ TTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACA TGA TGATACAAGCACAGATCGAAGATGGGAAATGG TGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGG TTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATGGCCTCTG CTTGAGCTATCCTCGTGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGC TTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACA GG CTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGTCCCGAAACA GGTCA TGACT AATCTGG TGA ] [-] EMBL AK065115 [ TACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAAACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTGGTCCCGCACACCAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT] [+] EMBL CB657026 [ cACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGACTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCA ] [+] EMBL CB657197 [ CAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTG ] [-] EMBL BI807013 [ CATCCATTTCTTTCAGGTTAACTTTACTTTCATACACA TGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCATGGCCTTTTAG A TCGTGGGAAA NGGAGTTGATGAGCTGNCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGG TTG CCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG TTGAGCTATCCTC TGGCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGC TTGG ATTG GAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGG CTCTTTCACGGTCATGG TTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACCTGTCGAGATGT CCGCAA ACGGGTCATTGACTAAATCGGGNTGACACTGGGAGAAAGGGGCCAATGGATCCACCA ] [-] EMBL AK061971 [ ATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGAT ] [-] EMBL AU174263 [ TTTTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAN A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCANAAGGTGTGTCTGATGATAATGGCCCTAANATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTANAAAGACTAACACGGC ] [+] EMBL CB650777 [ TTTCAG TAACTTTACTTTCATACACATTGATTGCTACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGA ] consensusID : consensus_16396#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence [CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCCTTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATTTCTTTCAGAAACTTTACTTTCATACACATTGATTGAAACAAACACAAAACCAAAAAGGGAAATGGGTGGAAAACAAAAGGGCTTCTTCATGCCTTTTAAAACGGGGGAAAAAGAATTGAAGAACTACCATCCCAGCTTTCTACTCAAAAGTAATCTTCCTAATGAAACTATTCCTCTGGGGGTTGCCCCTCCCCCCAACCCCCAAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTGAACTGAAAATTAATCCCCTCCCCGGGTGGAATCTTAACATATCAGCACGAACCATTGCCCCTGCTTGAACTATCCCCTGCCTGAAAATCTGAACCATCTCATCAGCCTTCTCAAAAAAAAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAATAACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTGCAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCCCTTGA] [+] EMBL CB642223 [CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCCTTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATTTCTTTCAGAAACTTTACTTTCATACACATTGATTGAAACAAACACAAAACCAAAAAGGGAAATGGGTGGAAAACAAAAGGGCTTCTTCATGCCTTTTAAAACGGGGGAAAAAGAATTGAAGAACTACCATCCCAGCTTTCTACTCAAAAGTAATCTTCCTAATGAAACTATTCCTCTGGGGGTTGCCCCTCCCCCCAACCCCCAAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTGAACTGAAAATTAATCCCCTCCCCGGGTGGAATCTTAACATATCAGCACGAACCATTGCCCCTGCTTGAACTATCCCCTGCCTGAAAATCTGAACCATCTCATCAGCCTTCTCAAAAAAAAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAATAACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTGCAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCCCTTGA] consensusID : consensus_16396#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence [TTTTTTTTTTTTTTCAGAAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAAATGGAAAATGGTTGAAATACAATAAGGTTTTTCTTCATGCCCTTTTTAAATCCGGGGAAAAATGAGTTTGATGAGCTTGCAATAAAAGGTTTTCTACTCAAAACGTAACCTTTCTTATTGAAGCTATTTAATCTGTGGATAGCCCTTTTTCCAGAGCCCTCAAAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTTAAATGGAAGATAACCCCCCTTTCCAAGGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCCAAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCGTGCTGCGTTTTAAAAATCGCGCTTGCAAACAATCTGTGTATACACAACAAAACCCTTAGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCATTCTTCCCCTCAAAGTGGCG] [+] EMBL CA761597 [TTTTTTTTTTTTTTCAGAAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAAATGGAAAATGGTTGAAATACAATAAGGTTTTTCTTCATGCCCTTTTTAAATCCGGGGAAAAATGAGTTTGATGAGCTTGCAATAAAAGGTTTTCTACTCAAAACGTAACCTTTCTTATTGAAGCTATTTAATCTGTGGATAGCCCTTTTTCCAGAGCCCTCAAAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTTAAATGGAAGATAACCCCCCTTTCCAAGGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCCAAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCGTGCTGCGTTTTAAAAATCGCGCTTGCAAACAATCTGTGTATACACAACAAAACCCTTAGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCATTCTTCCCCTCAAAGTGGCG] consensusID : consensus_16396#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 519 fasta sequence [TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCC-TTGGGAGGCCTTTCTGCAAGTG-TGGACAACTTTACAACAGGG-AGCGAACATCCATTGTCTTTC-GTCAACTTTACTTTCATCA-CACTATGCATTGCATCACCACAGCCACCAGCATCGCACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTTTCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTTCTACTCAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAGACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGAGTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGCCATTGCTCTGCTTGAGCTATCCTCTGCTGAATATCTTGAGCCATCTCATCAGCTTC] [-] EMBL BI812138 [TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCC TTGGGAGGCCTTTCTGCAAGTG TGGACAACTTTACAACAGGG AGCGAACATCCATTGTCTTTC GTCAACTTTACTTTCATCA CACTAT ] [-] EMBL BI811895 [ tttttttttTAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAACAGGGAAGC AACATCCATT TCTTTCAGT AACTTTACTTTCATCACCACCATGCATTGCATCACCACAGCCACCAGCATCGCACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTTTCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTTCTACTCAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAGACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGAGTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGCCATTGCTCTGCTTGAGCTATCCTCTGCTGAATATCTTGAGCCATCTCATCAGCTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16396#0 -------------CTTTTTTTTTTTTTTTGCTGAACTGAAAGTCCAACTACAATTGGGCC 47 consensus_16396#1 ------------------------TCCCNTCTTNTNCGAAAGTCCAACTACAATGGG--C 34 consensus_16396#2 CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCC 60 consensus_16396#4 -TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGG--C 57 consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 TTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAACAGGGAAGCAACATCCATT-T 106 consensus_16396#1 CTTGGGAGGC-TTTCTG-AAGTGTTTT-TTTTTTTACAACAGGGAAGCAACATCCATT-T 90 consensus_16396#2 TTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATT-T 119 consensus_16396#4 CTTGGGAGGCCTTTCTGCAAGTG-TGGACAACTTTACAACAGGGAGCGAACATCCATTGT 116 consensus_16396#3 --------------------------------------------------TTTTTTTTTT 10 * ** * consensus_16396#0 CTTTCAGTAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 153 consensus_16396#1 CTTTCAGTAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 137 consensus_16396#2 CTTTCAGAAACTTTACTTTCAT------ACACATTG-------ATTGAAACAAACACAAA 166 consensus_16396#4 CTTTCGTCAACTTTACTTTCATCACACTATGCATTGCATCACCACAGCCACCAGCATCGC 176 consensus_16396#3 TTTTCAGAAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 57 **** ************** * ***** * * ** * ** consensus_16396#0 TCGAAGATGGGAA---ATGGTTGGAAT----ACAATAGGTCTTC---TTCATGCCTTTT- 202 consensus_16396#1 TCGAAGATGGGAA---ATGGTTGGAAT----ACAATAGGTCTTC---TTCATGCCTTTT- 186 consensus_16396#2 ACCAAAAAGGGAA---ATGGGTGGAAA----ACAAAAGGGCTTC---TTCATGCCTTTT- 215 consensus_16396#4 ACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTT 236 consensus_16396#3 TCGAAAATGGAAA---ATGGTTGAAAT----ACAATAAGGTTTTTC-TTCATGCCCTTTT 109 * ** * **** * ** *** * * * * ****** *** consensus_16396#0 ---AGATCGTGGGAAAATGAGTTG--------ATGAGCTAC-CATCACAGCTTT-CTACT 249 consensus_16396#1 ---AGATCGTGGGAAAATGAGTTG--------ATGAGCTAC-CATCACAGCTTT-CTACT 233 consensus_16396#2 ---AAAACGGGGGAAAAAGAATTG--------AAGAACTAC-CATCCCAGCTTT-CTACT 262 consensus_16396#4 TCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTT-CTACT 295 consensus_16396#3 T-AAATCCGGGGAAAAATGAGTTTG-------ATGAGCTTGCAATAAAAGGTTTTCTACT 161 ** * * * * * ** ** ** *** ***** consensus_16396#0 CAG-ACGT-AATCTTCCTA--TTGAAGCT-ATTCA--TCTGTGGTTTGCCCTTCTCCCGA 302 consensus_16396#1 CAG-ACGT-AATCTTCCTA--TTGAAGCT-ATTCA--TCTGTGGTTTGCCCTTCTCCCGA 286 consensus_16396#2 CAA-AAGT-AATCTTCCTA--ATGAAACT-ATTCC--TCTGGGGGTTGCCCCTCCCCCCA 315 consensus_16396#4 CAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAG 355 consensus_16396#3 CAAAACGT-AACCTTTCTTA-TTGAAGCT-ATTTAA-TCTGTGGATAGCCCTTTTTCCAG 217 ** * ** ** *** ** **** ** *** ** * * * * * consensus_16396#0 GCCCTC----AAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTG-AACTGAGA 357 consensus_16396#1 GCCCTC----AGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTG-AACTGAGA 341 consensus_16396#2 ACCCCC----AAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTG-AACTGAAA 370 consensus_16396#4 ACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGA 415 consensus_16396#3 AGCCCTCA--AAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTT-AAATGGAA 274 ** * * * * * * * * * ** ** * * * ** ** * consensus_16396#0 GTTAA---TCCACTCTCAGGCTGGAATCTTAACATATCAGC-ACGAGC--CATTGCCTCT 411 consensus_16396#1 GTTAA---TCCACTCTCAGGCTGGAATCTTAACATATCAGC-ACGAGC--CATTGCCTCT 395 consensus_16396#2 ATTAA---TCCCCTCCCCGGGTGGAATCTTAACATATCAGC-ACGAAC--CATTGCCCCT 424 consensus_16396#4 GTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGC--CATTGC-TCT 472 consensus_16396#3 GATAA--CCCCCCTTTCCAA--GGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCC 330 * * ** ** * ** *** ** * * * ** * * * * consensus_16396#0 ---GCTTGAGCTATCCTCTGCCTGAATATCT-GAGCCATCTCATCAGCCTTCTCAAAAAC 467 consensus_16396#1 ---GCTTGAGCTATCCTCTGCCTGAATATCT-GAGCCATCTCATCAGCCTTCTCAAAAAC 451 consensus_16396#2 ---GCTTGAACTATCCCCTGCCTGAAAATCT-GAACCATCTCATCAGCCTTCTCAAAAAA 480 consensus_16396#4 ---GCTTGAGCTATCCTCTGC-TGAATATCTTGAGCCATCTCATCAGCTTC--------- 519 consensus_16396#3 AAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCG----- 385 * * * * * ** * * * *** * consensus_16396#0 AAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACT 527 consensus_16396#1 AAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACT 511 consensus_16396#2 AAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAAT 540 consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 -TGCTGCGTTTTAAAAATCGCGCTTGCAAACAAT--CTGTGTATACACAACAAAACCCTT 442 consensus_16396#0 AACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTG 587 consensus_16396#1 AACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTG 571 consensus_16396#2 AACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTG 600 consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 AGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCAT 502 consensus_16396#0 CAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCC 647 consensus_16396#1 CAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCC 631 consensus_16396#2 CAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCC 660 consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 TCTTCCCCTCAAAGTGGCG----------------------------------------- 521 consensus_16396#0 ATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAA 707 consensus_16396#1 ATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAA 691 consensus_16396#2 CTTGA------------------------------------------------------- 665 consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAG 767 consensus_16396#1 GACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAG 751 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAG 827 consensus_16396#1 GACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAG 811 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 CAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCC 887 consensus_16396#1 CAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCC 871 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 CTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAAC 947 consensus_16396#1 CTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAAC 931 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 ATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAA 1007 consensus_16396#1 ATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAA 991 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAA 1067 consensus_16396#1 GCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAA 1051 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 ACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAA 1127 consensus_16396#1 ACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAA 1111 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 AGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCAT 1187 consensus_16396#1 AGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCAT 1171 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGC 1247 consensus_16396#1 GAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGC 1231 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTC 1307 consensus_16396#1 GGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTC 1291 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGC 1367 consensus_16396#1 GGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGC 1351 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GTACGTCCCGCACACCAGCGCCGACGGCCGCGTGGGCGCCGCGGGGCGGCGCCGCGGCGC 1427 consensus_16396#1 GTG-GTCCCGCACACCAG------------------------------------------ 1368 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 GCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGC 1487 consensus_16396#1 -------AGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGC 1421 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ consensus_16396#0 TCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC 1547 consensus_16396#1 TCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT------------------ 1463 consensus_16396#2 ------------------------------------------------------------ consensus_16396#4 ------------------------------------------------------------ consensus_16396#3 ------------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||