Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 16414 cluster # 16414       Sequences # 33       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16414#0 length = 656 sequences # 4  
consensus_16414#1 length = 562 sequences # 13  
consensus_16414#2 length = 557 sequences # 7  
consensus_16414#3 length = 500 sequences # 1  
consensus_16414#4 length = 489 sequences # 7  
consensus_16414#5 length = 476 sequences # 1  

consensusID : consensus_16414#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 656
fasta sequence
                              [CCGCCTTGACGCGCAGACGCTGCTGCAGCATCAGCAGCCGCGCGTGCGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCCAAACTTCAAGGAGGGTGTAAAGACAATTTTCAAGCGCTTGTTTCGTGTTTATGCCCACATATATCAC]

[+] EMBL CA758885             [CCGCCTTGACGCGCAGACGCTGCTGCAGCATCAGCAGCCGCGCGTGCGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCG   GGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTGTCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTACCCCAANAGCTTGGCACACCATTCCCGCC                                                                   ]
[+] EMBL CF279470             [                                AGCAGCCGCGCGTGCGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCCAAACTTCAAGGAGGGTGTAAAGACAATTTTCAAGCGCTTGTTTCGTGTTTATGCCCACATATATCAC]
[+] EMBL CF292263             [                                  CAGCCGCGCGTGCGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGGGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGG                                                                                  ]
[+] EMBL AK099558             [                                           GTGCGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC                                                                   ]


>consensus_16414#0 CCGCCTTGACGCGCAGACGCTGCTGCAGCATCAGCAGCCGCGCGTGCGTGCGAATCATTC CGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTC GGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGC TCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTG CACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAA GGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTA ACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCCAA CAATGACTGCTGGCCCAAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGC CGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGATTGAAGGCCAAC TTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCCAAACTTCAAGG AGGGTGTAAAGACAATTTTCAAGCGCTTGTTTCGTGTTTATGCCCACATATATCAC



consensusID : consensus_16414#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 562
fasta sequence
                              [CATGGACTAAGGAGTAGAAAGTGCGAATCATTCCGGCCGCAGCCT-ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA-ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC-AACAA-TGACTGC-TGGCCC-AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG-TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]

[+] EMBL CF320031             [CATGGACTAAGGAGTAGAAAGTGCGAATCATTCCGGCCGCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL AK098953             [                       CGAATCATTCCGGCCGCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL AK061735             [                             ATTCCGGCCGCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL C26118               [                                CCGGCCGCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGTCGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACANCTGAGANCTGCCCAAACAATTGACTGCTTGGC                                                                                                                                                             ]
[+] EMBL AK104547             [                                 CGGCCGCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL CK085258             [                                      GCAGCCT ACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL C26011               [                                       CAGCCTNACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGNGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGANCTG CC AACAA TGACTTCTTGGCCCAAAAGTATGANTACAGATGGGCTn                                                                                                                                   ]
[+] EMBL CF328401             [                                                 TCTGCCTCTCTCCTCTCCTCGCGGCTTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCATACCATTCCCGCC]
[+] EMBL BP184605             [                                                   TGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGA ATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCC                           ]
[+] EMBL OSC722               [                                                                                                                     GGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGG CGGANATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTTGGAGTACCTAATGGACTNGATTGAAGGCCAACTTGATGATGAATCTATATTT CCCAAAAGCTT GCACACCATTC     ]
[+] EMBL CA998782             [                                                                                                                                                                                  CGTCCCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]
[+] EMBL CA753586             [                                                                                                                                                                                                                                                                                                               ATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGCTGCCC AACAA TGACTGC TGGCCC AAAGTATGAGTACAGATGGGCTGATGGTGTACAGATNAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCC                         ]
[+] EMBL CA999659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                            TACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGCC]


>consensus_16414#1 CATGGACTAAGGAGTAGAAAGTGCGAATCATTCCGGCCGCAGCCTACCTCTGCCTCTCTC CTCTCCTCGCGGCGTCGGCAGCGAGTTCTCCTCGGATCGGGAGTGGAGGAGAAGCGGGAG GAGGAGGAGGAGGAGGGATGAGTCTCTTCGGGCTCGGCCGGAATCAGAAGACGTTCCGTC CCAAGAAGAGTGCTCCTTCAGGAAGCAAGGGTGCACAGCTTCGGAAGCACATAGATGCCA CTCTTGGCAGTGGAAACCTTAGGGAAGCTGTAAGGTTGCCGCCTGGAGAAGATATCAATG AATGGCTGGCTGTGAATACTGTGGATTTCTTTAACCAAGTTAACCTGCTGTACGGCACAC TCGCTGAGTTCTGCACACCTGAGAGCTGCCCAACAATGACTGCTGGCCCAAAGTATGAGT ACAGATGGGCTGATGGTGTACAGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATG TGGAGTACCTAATGGACTGGATTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAA AGCTTGGCACACCATTCCCGCC



consensusID : consensus_16414#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 557
fasta sequence
                              [CACCATGTGCGCCGCGCATAAAGCTTCAAGGGAAGGTTGTGAAAGACCCATGTGTTNCAAGGCGCT---TGT-TTCGTGTTT-ATG-CCCACAT-AT-AT-CACTCCCATTTT-CAGAAGATTGT-CAGCCTCAAGGAGGAGGCCCAT-CTT-AACACGT-GCTT-CAAGCACTT-CAT-CCTGTTTACAACT-GAATTTGGCCTGATTGA-CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA-TCGAATCGATTATT-CCATACTGAGAAGAATA-CA-GGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA-CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA-CCTTGTGTAAGCGTGCTTGTAATGTAATAA-CA-GGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAATCGTGAGTTGCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BQ905955             [CACCATGTGCGCCGCGCATAAAGCTTCAAGGGAAGGTTGTGAAAGACCCATGTGTTNCAAGGCGCTTGGTGTGTACGTGTTTAATGCCCCACATGATGATGCACTCCCATTTTGCAGAAGATTGTGCAGCCTCAAGGAGGAGGCCCATGCTTGAACACGTGGCTTGCAAGCACTTGCATGCCTGTTTACNACTGGAATTTGGCCTGATTGACCAAGAAGGAGCTGGCTCCACTCCAGGAGCTCACTCGAATCGATTATT CCATACTGAGAAGAATACCACGGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTACCCTTGNGTAAGCGTGCTTGTAATGTAATAACCACGGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCCATCGTGAGTTGCCAAAAAAAAAA              ]
[+] EMBL C28995               [                                                            aGCGCT   TGT TTCGTGTTT ATG CCCACAT AT AT CACTCCCATTTT CAGAAGATTGT CAGCCTCAAGGAGGAGGCCCAT CTT AACACGT GCTT CAAGCACTT CAT CCTGTTTACAACT GAATTTGGCCTGATTGA CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA TCGAATCGATTATT CCATACTGAGAAGAATA CA GGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCANCACTATTTTACTGGCATAGAGCTTACTGTTCCAGAT                                                                                                                                                                                                        ]
[+] EMBL AU108207             [                                                                     TGT TTCGTGTTT ATG CCCACAT AT AT CACTCCCATTTT CAGAAGATTGT CAGCCTCAAGGAGGAGGCCCAT CTT AACACGT GCTT CAAGCACTT CAT CCTGTTTACAACT GAATTTGGCCTGATTGA CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA TCGAATCGATTATT CCATACTGAGAAGAATA CA GGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA CCTTGTGTAAGCGTGCTTGTAATGTAATAA CA GGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAATCGTGAGTTGCAAAAAAAAAAAA             ]
[-] EMBL CF320032             [                                                                      GT TTCGTGTTT ATG CCCACAT AT AT CACTCCCATTTT CAGAAGATTGT CAGCCTCAAGGAGGAGGCCCAT CTT AACACGT GCTT CAAGCACTT CAT CCTGTTTACAACT GAATTTGGCCTGATTGA CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA TCGAATCGATTATT CCATACTGAGAAGAATA CA GGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA CCTTGTGTAAGCGTGCTTGTAATGTAATAA CA GGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAATCGTGAGTTGCAATTAAAAAAAAA            ]
[-] EMBL CF279471             [                                                                                                                                                                                CAT CCTGTTTACAACT GAATTTGGCCTGATTGA CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA TCGAATCGATTATT CCATACTGAGAAGAATA CA GGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTAATGAACCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGATATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA CCTTGTGTAAGCGTGCTTGTAATGTAATAA CA GGATTGGTGGATTAGGATATATTGCAAAGAACGATCTATTAATCCAATCGTGAGTT  AAAATTAAAAAA             ]
[+] EMBL AU092950             [                                                                                                                                                                                       GTTTACAANT GAATTTGGCCTGATTGA CAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA TCGAANCGATTATN CCATACTGAGAAGAATA CA GGGNCGGAACGGAGCGTGGATAACGAGTTCTTTACNTGGACCGATCGAGGAATCAGGCTNCTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA CCTTGTGTAAGCGTGCTTGTAATGTAATAA CA GGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAA     A     AAAAAAAAAAAAAAAAAAAA     ]
[+] EMBL AU057616             [                                                                                                                                                                                                                                    CCACTCCAGGAGCTCA TCGAATCGATTATTCCCATACTGAGAAGAATA CA GGGNCGGAACGGAGCGTGGATAACGAGTTCTTTACATGGA CGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGNGCTTACTGTTCCAGATATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTA CCTTGTGTAAGCGTGCTTGTAATGTAATAA CA GGATTGGTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_16414#2 CACCATGTGCGCCGCGCATAAAGCTTCAAGGGAAGGTTGTGAAAGACCCATGTGTTNCAA GGCGCTTGTTTCGTGTTTATGCCCACATATATCACTCCCATTTTCAGAAGATTGTCAGCC TCAAGGAGGAGGCCCATCTTAACACGTGCTTCAAGCACTTCATCCTGTTTACAACTGAAT TTGGCCTGATTGACAAGAAGGAGCTGGCTCCACTCCAGGAGCTCATCGAATCGATTATTC CATACTGAGAAGAATACAGGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGACG ATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGAT ATCAGACATAAAAAAGGACATTTGACATTGCTAATGCTATGTTTTTTGTGTACTGATGTT CGTTCGTCCTGATTCAGTATTACCTTGTGTAAGCGTGCTTGTAATGTAATAACAGGATTG GTGGATTGGGATATATTGCAAAGAACGATCTATTAATCCAATCGTGAGTTGCAAAAAAAA AAAAAAAAAAAAAAAAA



consensusID : consensus_16414#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 500
fasta sequence
                              [ACTTCCAGGAGTTTGTAAACACAATTTTCAAGCCCTTTTTCGTTTTTATCCCCACATATATCACTCCCATTTTCAGAAGATTGTCACCCTCAAGGAGGAGCCCATCTTGAACACGTGCTTCAACACTTCATCCTGTTTACAACTGAATTTGGCCTGATTGACAAGAAGGAGCTGGCTCCACTCCAGGAGCTCATCGAATCGATTATTCCATACTGAGAAGAATACCAGGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGACGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACCTAAAAAAGGACACTTTGACACTTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTACCTTGTGTAAGCGTGCTTGTAATGTAATAACAGGATTGGTGGATTGGGATATATTCAAAGAACGATCTATTAACCCCAAAAAAAAAA]

[+] EMBL BM038824             [ACTTCCAGGAGTTTGTAAACACAATTTTCAAGCCCTTTTTCGTTTTTATCCCCACATATATCACTCCCATTTTCAGAAGATTGTCACCCTCAAGGAGGAGCCCATCTTGAACACGTGCTTCAACACTTCATCCTGTTTACAACTGAATTTGGCCTGATTGACAAGAAGGAGCTGGCTCCACTCCAGGAGCTCATCGAATCGATTATTCCATACTGAGAAGAATACCAGGGACGGAACGGAGCGTGGATAACGAGTTCTTTACATGGACGATCGAGGAATCAGGCTACTTGCAACACTATTTTACTGGCATAGAGCTTACTGTTCCAGATATCAGACCTAAAAAAGGACACTTTGACACTTGCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTACCTTGTGTAAGCGTGCTTGTAATGTAATAACAGGATTGGTGGATTGGGATATATTCAAAGAACGATCTATTAACCCCAAAAAAAAAA]


>consensus_16414#3 ACTTCCAGGAGTTTGTAAACACAATTTTCAAGCCCTTTTTCGTTTTTATCCCCACATATA TCACTCCCATTTTCAGAAGATTGTCACCCTCAAGGAGGAGCCCATCTTGAACACGTGCTT CAACACTTCATCCTGTTTACAACTGAATTTGGCCTGATTGACAAGAAGGAGCTGGCTCCA CTCCAGGAGCTCATCGAATCGATTATTCCATACTGAGAAGAATACCAGGGACGGAACGGA GCGTGGATAACGAGTTCTTTACATGGACGATCGAGGAATCAGGCTACTTGCAACACTATT TTACTGGCATAGAGCTTACTGTTCCAGATATCAGACCTAAAAAAGGACACTTTGACACTT GCTAATGCTATGTTTTTTGTGTACTGATGTTCGTTCGTCCTGATTCAGTATTACCTTGTG TAAGCGTGCTTGTAATGTAATAACAGGATTGGTGGATTGGGATATATTCAAAGAACGATC TATTAACCCCAAAAAAAAAA



consensusID : consensus_16414#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 489
fasta sequence
                              [TTTTTTTTTTGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTTTGCAATATAT-CCCAA-T-CCA-CCAAT-CC-T-GTTA-TTACATTACAAGCACGCTTACA-CAAGGTAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAA-CATAGCATTAGCAATGTCAA-A-TGTCCTTT-TTTATGTCTGATATCTGGAACAGTAAGCTCTATG-CCAGTAAAA-TAGTGTTG-CAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTC-GTTATCCACGCTCCGTTCC-GTCCC-T-GTATTCTTCTCAGTA-TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA-AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCA-TAAACACGAAACA]

[-] EMBL BM420519             [TTTTTTTTTTGGAAGCAACAATGGCAACTCACGATGGGATTAATAGATCGTTCTTGGCAATATAT CCCAA T CCA CCAAT CCGT GTTA TTACATTACAAGCACGCTTACAGCAAGGTAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAA CATAGCATTAGCAAGGTCAAGAGTGTCCTTT TTTATGTCTGATATCTGGAACAGTAAGCTCTATG CCAGTAAAA TAGTGTTG CAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTCGGTTATCCACGCTCCGTTCCGGTCCCGTGGTATTCTTCTCAGTAGTGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTG                                                        ]
[+] EMBL CF328402             [    TTTTTTGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTTTGCAATATAT CCCAA T CCA CCAAT CC T GTTA TTACATTACAAGCACGCTTACA CAAGGTAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAA CATAGCATTAGCAATGTCAA A TGTCCTTT TTTATGTCTGATATCTGGAACAGTAAGCTCTATG CCAGTAAAA TAGTGTTG CAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTC GTTGTCCACGCTCCGTTCC GTCCC T GTATTCTTCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGA                          ]
[-] EMBL BI797717             [     ggaacaggAGC ACAA TGGAACTCACGA TGGATTAATAGATCG TC TTG AATATAT CCCAA T CCA CCAAT CC T GTTA TTACATTACAAGCACGCTTACA CAAGGTAATACTGAATCAGGACGAAAGAACATCAGTACACAAAAAACCATAGCATTAGCAATGTCAA A TGTCCTTTGTTTATGTCTGATATCTGGAACAGTAAGCTCTATG CCAGTAAAA TAGTGTTG CAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTC GTTATCCACGCTCCGTTCC GTCCC T GTATTCTTCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTACACAGGATGACGTGCTTGACAGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCA TAAACACGAAACA]
[-] EMBL AU092231             [                               tttTTGGATTAATAGATCGTTCTTTGCAATATAT CCCAA T CCA CCAAT CC T GTTA TTACATTACAAGCACGCTTACA CAAGGNAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAA CATAGCATTAGCAATGTCAA A TGTCCTTT TTTATGTCTGATATCTGGAACAGTAAGCTCTATG CCAGTAAAA TAGTGTTG CAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTC GTTATCCACGCTCCGTTCC GTCCC T GTATTCTTCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCA TAAACACGAAACA]
[-] EMBL AU057615             [                                                          atTATNTCCCCAANTCCCACCCAATCCC TGGTTATTTACATTACAGGCACGCTTACA CAGGGTAATACTG ATCAGGACGAACGAACATCAGTACACAAAAAA CATAGCATTAGCAATGTCAA A TGTCCTTT TTTATGTCTGATATCTGGAACAGTAAGCTCTATGCCCAGTAAAATTAGTGTTGCCAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTC GTTATCCACGCTCCGTTCC GTCCC T GTATTCTTCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCA TAAACACGAAACA]
[-] EMBL C28437               [                                                                                                                                                          CACAAAAAA CATAGCATTAGCAATGTCAA A TGGCCTTT TTTATGTCTGATATCTGGAACAGTAAGCTCTATG CCAGTAAAA TAGTGTTG CAAGTAGCCTGATTCCTCGATCGNCCATGTAAAGAACTC GTTATCCACGCTCCGTTCC GTCCC T GTATTCTTCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCA TAAACACGAAACA]
[-] EMBL AA749967             [                                                                                                                                                                                                                                                                                                                                     TCTCAGTA TGGAATAATCGATTCGATGAGCTCCTGGAGT GAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGA AGCACGTGTTAAGATGGGCCTCCTCCTTGAGGC GACAATCTTCTGAAAATGGGAGTGATAGATGTGGGCACGAAACA       ]


>consensus_16414#4 TTTTTTTTTTGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTTTGCAA TATATCCCAATCCACCAATCCTGTTATTACATTACAAGCACGCTTACACAAGGTAATACT GAATCAGGACGAACGAACATCAGTACACAAAAAACATAGCATTAGCAATGTCAAATGTCC TTTTTTATGTCTGATATCTGGAACAGTAAGCTCTATGCCAGTAAAATAGTGTTGCAAGTA GCCTGATTCCTCGATCGTCCATGTAAAGAACTCGTTATCCACGCTCCGTTCCGTCCCTGT ATTCTTCTCAGTATGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCT TGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTTAAGAT GGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCATAAA CACGAAACA



consensusID : consensus_16414#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 476
fasta sequence
                              [TTTTTACTGGGAAAAGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTTTGCAATATAACCCAATCCACCAATCCTGTTATTACATTACAAGCACGCTTACACAAGGTAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAACATAGCATTAGCAATGTCAAATGTCCTTTTTTATGTCTGATATCTGGAACAGTAAGCTCTATGCCAGTAAAATAGTGTTGCAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTCGTTATCCACGCTCCGTTCCGTCCCTGTATTCTTCTCAGTATGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAATGGGAGTGATATATGTG]

[+] EMBL CF292264             [TTTTTACTGGGAAAAGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTTTGCAATATAACCCAATCCACCAATCCTGTTATTACATTACAAGCACGCTTACACAAGGTAATACTGAATCAGGACGAACGAACATCAGTACACAAAAAACATAGCATTAGCAATGTCAAATGTCCTTTTTTATGTCTGATATCTGGAACAGTAAGCTCTATGCCAGTAAAATAGTGTTGCAAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTCGTTATCCACGCTCCGTTCCGTCCCTGTATTCTTCTCAGTATGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTCCTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTTAAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAATGGGAGTGATATATGTG]


>consensus_16414#5 TTTTTACTGGGAAAAGGAAGCAACAATTGCAACTCACGATTGGATTAATAGATCGTTCTT TGCAATATAACCCAATCCACCAATCCTGTTATTACATTACAAGCACGCTTACACAAGGTA ATACTGAATCAGGACGAACGAACATCAGTACACAAAAAACATAGCATTAGCAATGTCAAA TGTCCTTTTTTATGTCTGATATCTGGAACAGTAAGCTCTATGCCAGTAAAATAGTGTTGC AAGTAGCCTGATTCCTCGATCGTCCATGTAAAGAACTCGTTATCCACGCTCCGTTCCGTC CCTGTATTCTTCTCAGTATGGAATAATCGATTCGATGAGCTCCTGGAGTGGAGCCAGCTC CTTCTTGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTT AAGATGGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAATGGGAGTGATATATGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16414#4      ----------------------TTTTTTTTTTG-----GAAGCAACAATTGCAACTCACG 33
consensus_16414#5      ----------------------TTTTTACTGGGAAAAGGAAGCAACAATTGCAACTCACG 38
consensus_16414#2      ------------CACCATGTGCGCCGCGCATAAAGCTTCAAGGGAAGGTTGTGAAAGACC 48
consensus_16414#3      ----------------------------------ACTTCCAGG--AGTTTGTAAA----- 19
consensus_16414#0      CCGCCTTGACGCGCAGACGCTGCTGCAGCATCAGCAGCCGCGC-GTGCGTGCGAATCA-- 57
consensus_16414#1      ----------------------------CATGGACTAAGGAGTAGAAAGTGCGAATCA-- 30
                                                                *       **  *      

consensus_16414#4      ATTGGATTAATAGAT-CGTTCTTTGCAAT-ATATCCCAATC-CACCAATCCTGTTATTAC 90
consensus_16414#5      ATTGGATTAATAGAT-CGTTCTTTGCAAT-ATAACCCAATC-CACCAATCCTGTTATTAC 95
consensus_16414#2      CATGTGTTNCAAGGCGCTTGTTTCGTGTTTATGCCCACATA-TATCACTCCCATTTTCAG 107
consensus_16414#3      CACAATTTTCAAGC--CCTTTTTCGTTTTTATCCCCACATA-TATCACTCCCATTTTCAG 76
consensus_16414#0      TTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTC 117
consensus_16414#1      TTCCGGCCGCAGCCTACCTCTGCCTCTCTCCTCTCCTCGCGGCGTCGGCAGCGAGTTCTC 90
                                       * *         *  *  **         *          *   

consensus_16414#4      ATTACAAGCACGCTTACACAAGG---TAATACTGAAT--CAGGACGAACGAACATCA--- 142
consensus_16414#5      ATTACAAGCACGCTTACACAAGG---TAATACTGAAT--CAGGACGAACGAACATCA--- 147
consensus_16414#2      AAGATTGTCAGCCTCAAGGAGGAGGCCCATCTT-AACA-CGTGCTTCAAGCACTTCATCC 165
consensus_16414#3      AAGATTGTCACCCTCAAGGAGGAG-CCCATCTTGAACA-CGTGCTTCAA-CACTTCATCC 133
consensus_16414#0      CTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCG 177
consensus_16414#1      CTCGGATCGGGAGTGGAGGAGAAGCGGGAGGAGGAGGAGGAGGAGGGATGAGTCTCTTCG 150
                                    *     *        *     *       *    *      **    

consensus_16414#4      -GTACACAAA-AAACATAGCATTAGCAATGTCAAATGTCCTTTTTTATGTCTGATATCTG 200
consensus_16414#5      -GTACACAAA-AAACATAGCATTAGCAATGTCAAATGTCCTTTTTTATGTCTGATATCTG 205
consensus_16414#2      TGTTTACAACTGAATTTGGCCTGATTGACAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA 225
consensus_16414#3      TGTTTACAACTGAATTTGGCCTGATTGACAAGAAGGAGCTGGCTCCACTCCAGGAGCTCA 193
consensus_16414#0      GGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTC--CTTCAGGAAGCAA 235
consensus_16414#1      GGCTCGGCCGGAATCAGAAGACGTTCCGTCCCAAGAAGAGTGCTC--CTTCAGGAAGCAA 208
                        *          *                   **         *      * *       

consensus_16414#4      --GAACAGTAAGCTCTATGCC-AGTAAAATA----GTGTTGCAA--GTAGCCT-----GA 246
consensus_16414#5      --GAACAGTAAGCTCTATGCC-AGTAAAATA----GTGTTGCAA--GTAGCCT-----GA 251
consensus_16414#2      TCGAATCGATTATTCCATACTGAGAAGAATAC-AGGGACGGAAC--GGAGCGT-----GG 277
consensus_16414#3      TCGAATCGATTATTCCATACTGAGAAGAATACCAGGGACGGAAC--GGAGCGT-----GG 246
consensus_16414#0      --GGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAA 293
consensus_16414#1      --GGGTGCACAGCTTCGGAAGCACATAGATGCCACTCTTGGCAGTGGAAACCTTAGGGAA 266
                         *          *        *     **          * *   * * * *       

consensus_16414#4      TTCCTCGATCGTCCATGTAAAGAACTCGTTATCCA--CGCTCCGTTCCGTCCCTGTATTC 304
consensus_16414#5      TTCCTCGATCGTCCATGTAAAGAACTCGTTATCCA--CGCTCCGTTCCGTCCCTGTATTC 309
consensus_16414#2      ATAACGAGTTCTTTACATGGACGATCGAGGAATCA--GGCTAC-TTGCAACACTAT---T 331
consensus_16414#3      ATAACGAGTTCTTTACATGGACGATCGAGGAATCA--GGCTAC-TTGCAACACTAT---T 300
consensus_16414#0      GCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGAT 353
consensus_16414#1      GCTGTAAGGTTGCCGCCTGGAGAAGATATCAATGAATGGCTGGCTGTGAATACTGTGGAT 326
                                        *  *  *      *   *   ***   *       ** *    

consensus_16414#4      TTCTCAGTATGGAATAATCGATTCGATGAGCT---CCTGGAGTGGAGC-CAGCTCCTTCT 360
consensus_16414#5      TTCTCAGTATGGAATAATCGATTCGATGAGCT---CCTGGAGTGGAGC-CAGCTCCTTCT 365
consensus_16414#2      TTACTGGCATAGAGCTTACTGTTCCAGATATCAGACATAAAAAAGGAC-A-TTTGACA-T 388
consensus_16414#3      TTACTGGCATAGAGCTTACTGTTCCAGATATCAGACCTAAAAAAGGAC-ACTTTGACACT 359
consensus_16414#0      TTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGC 413
consensus_16414#1      TTCTTTAACCAAGTTAACCTGCTGTACGGCACACTCGCTGAGTTCTGCACACCTGAGAGC 386
                       **                *   *  *         *    *      *     *      

consensus_16414#4      TGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTTAAGAT 420
consensus_16414#5      TGTCAATCAGGCCAAATTCAGTTGTAAACAGGATGAAGTGCTTGAAGCACGTGTTAAGAT 425
consensus_16414#2      TGCTAAT---GCTATGTTTT-TTGTGTAC----TGATGTTCGTTCGTCCTGATTCAGTAT 440
consensus_16414#3      TGCTAAT---GCTATGTTTT-TTGTGTAC----TGATGTTCGTTCGTCCTGATTCAGTAT 411
consensus_16414#0      TGCCCA----ACAATGACTGCTGGCCCAAAGTATGA-GTACAGATGGGCTGATGGTGTAC 468
consensus_16414#1      TGCCCA----ACAATGACTGCTGGCCCAAAGTATGA-GTACAGATGGGCTGATGGTGTAC 441
                       **   *     * *       * *   *     *** ** *         *       * 

consensus_16414#4      GGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAAATGGGAGTGATATATGTGGGCATAAA 480
consensus_16414#5      GGGCCTCCTCCTTGAGGCTGACAATCTTCTGAAA-TGGGAGTGATATATGTG-------- 476
consensus_16414#2      ---TACCTTGTGTAAGCGTGCTTGTAATGTAATAACAGGATTGGTGGATTGGGATATATT 497
consensus_16414#3      ---TACCTTGTGTAAGCGTGCTTGTAATGTAATAACAGGATTGGTGGATTGGGATATATT 468
consensus_16414#0      AGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGA 528
consensus_16414#1      AGATAAAGAAGCCGATAGAAGTATCAGCACCAAAATATGTGGAGTACCTAATGGACTGGA 501
                                     *                * *    *     *   *           

consensus_16414#4      -CACGAAACA-------------------------------------------------- 489
consensus_16414#5      ------------------------------------------------------------
consensus_16414#2      GCAAAGAACGATCTATTAATCCAATCGTGAGTTGCAAAAAAAAAAAAAAAAAAAAAAAAA 557
consensus_16414#3      -CAAAGAACGATCTATTAACCC------------CAAAAAAAAAA--------------- 500
consensus_16414#0      TTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGC 588
consensus_16414#1      TTGAAGGCCAACTTGATGATGAATCTATATTTCCCCAAAAGCTTGGCACACCATTCCCGC 561
                                                                                   

consensus_16414#4      ------------------------------------------------------------
consensus_16414#5      ------------------------------------------------------------
consensus_16414#2      ------------------------------------------------------------
consensus_16414#3      ------------------------------------------------------------
consensus_16414#0      CAAACTTCAAGGAGGGTGTAAAGACAATTTTCAAGCGCTTGTTTCGTGTTTATGCCCACA 648
consensus_16414#1      C----------------------------------------------------------- 562
                                                                                   

consensus_16414#4      --------
consensus_16414#5      --------
consensus_16414#2      --------
consensus_16414#3      --------
consensus_16414#0      TATATCAC 656
consensus_16414#1      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)