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Oryza sativa
cluster # 16480 cluster # 16480       Sequences # 34       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16480#0 length = 1139 sequences # 24  
consensus_16480#1 length = 636 sequences # 1  
consensus_16480#2 length = 452 sequences # 6  
consensus_16480#3 length = 445 sequences # 1  
consensus_16480#4 length = 435 sequences # 1  
consensus_16480#5 length = 176 sequences # 1  

consensusID : consensus_16480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 1139
fasta sequence
                              [CTCGCCGAGATACCAATCGAGACTAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC-GCACACTTT-GTGA-GGACGG-TGA-CCCCA-TGGACGTCCTCGTCCTGATGCA-GGAACAAGTTGTCCCT-GGATG-TTTCCTGCGAGCTCGTGCTA--TTGGGCTC-ATGCCTA-TG-ATTGATCAGGGTGAGAAAGATGACAAGATCA-TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA-GGGACATC-AAGGAAAT-CCCCCCTCACCGCCTTCAAGAGATCCGCCG-CTTCTTTGAAGACTACAAGAAGAATGAG-AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA-TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAACTCATTGGAATCCTTTTTGACAAATCGTGTGATTCTGCCTGTGTAAGCATGATTTACTGCATTCTGATTCTGCCTTGTGTTTTCAAAAAAAAA]

[+] EMBL AK061019             [CTCGCCGAGATACCAATCGAGACTAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTCATTGGAAT                                                                                  ]
[+] EMBL AU091983             [                   AGACTAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK070562             [                         GACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTCATTGGAATCCTTTTTGACAAATCGTGTGATTCTGCCTGTGTAAGCAT                                           ]
[+] EMBL CF317280             [                          ACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTTNGTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGA CATTAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF337721             [                               ACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTTCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGAGGGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK103984             [                                 AGGCGGACGCGAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAA                                                                                                            ]
[+] EMBL AF022733             [                                aattCGG CACGAG   CGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGCGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTGTGAGTTGGATAAGGCAACTGGCCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTCT GTGA GGACGG TGA CCCCA TGGACGTCCTTGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTCGTGCTGATGA CCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCTTCACCGCTTTCAAGAGATCCGCCGTTTTTTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTTTCCCAGCAGAAGATGCCATCAACGCAATCAAGTATTCAATGGACTTTTACGGCGCCCACATCATTGAGAGCTCGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTTTCATCAATAGTACGACATATGTTAACACACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCCGACCCCTTTGCTGAACTCTTTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTCATTGGAATCCTTTTTGACCCATCGTGTGATTCTGCCTGTGTAAGCATGATTTACTGCATTCTGATTCTGCCTTGTGTTTTCAAAAAAAAA]
[+] EMBL CF313639             [                                           GAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAGCTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU197883             [                                           GAGCGTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS11621A            [                                            gacnTCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU077590             [                                                TCGTCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCNCCTGATCGACTCGCTCCGCCATNGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATNTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCANGAGCTCCAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS11993A            [                                            nnntngtnCCTCTTCGTTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AF093629             [                                                             TTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCTTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCTTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGATGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTCATTGGAATCCaaaaaaaa                                                                        ]
[+] EMBL CF293617             [                                                             TTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA998969             [                                                                                                                                         GCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSC136               [                                                                                                                                                         CACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGCACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCAC GCACACTTT GTGA GGACGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCTGGGATGTTTTCCTGCGAGCTCGTGCTAATTTGGGCTCAATGCCTATTGAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU091984             [                                                                                                                                                                                                                                                                                                                                                                                                           GGTTTCATTCCACGGCACACTTT GTGA GGNCGG TGA CCCCA TGGACGTCCTCGTCCTGATGCA GGAACAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA                                                                                             ]
[+] EMBL BI805751             [                                                                                                                                                                                                                                                                                                                                                                                                                  TTCCAC GCACACTTT GTGA GGACGGTTGACCCCCAGTGGACGTCCTCGTCCTGATGCAGGGAACAAGTTGTCCCG TGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AAC AAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCC AACCGAC GTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA                                                                                             ]
[-] EMBL CF313638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAAGTTGTCCCT GGATG TTTCCTGCGAGCTCGTGCTA  TTGGGCTC ATGCCTA TG ATTGATCAGGGTGAGAAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATATCGCCACTTCAGGGGACATCAAAGGAAATCCCCCCCTCACCGCCTTCAAGGGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTTTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA                                                                                             ]
[+] EMBL BM037722             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tTTGATCAGGGTGAGAAAGATGACAAGATCA TACCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATACTATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCCACCATTTAaaaa                                                                                                 ]
[+] EMBL AU096055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAGATGACAAGATCA TAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCA GGGACATC AAGGAAAT CCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAAa                                                                                            ]
[-] EMBL CF294607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGACATC AAGGAAATCCCCCCCTCACCGCCTTCAAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCACCCATTTTCATAAAAAa                                                                                            ]
[-] EMBL CF337722             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGAGATCCGCCG CTTCTTTGAAGACTACAAGAAGAATGAG AACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACAAAAAAAaa                                                                                           ]
[+] EMBL AU091901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAAGACTACAGGAAGAATGAGNNCCAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATNCCATCAACGCAATCAAGTACTCAATGGCCCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATA TATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTCATTGGAATCCTTTTTGACAAAaaaaaaa                                                              ]


>consensus_16480#0 CTCGCCGAGATACCAATCGAGACTAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCG TTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCT CCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTG CTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGC ACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTA GAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTG TTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCACGCACACTTTGTG AGGACGGTGACCCCATGGACGTCCTCGTCCTGATGCAGGAACAAGTTGTCCCTGGATGTT TCCTGCGAGCTCGTGCTATTGGGCTCATGCCTATGATTGATCAGGGTGAGAAAGATGACA AGATCATAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCAGGGACATCAAGGAAA TCCCCCCTCACCGCCTTCAAGAGATCCGCCGCTTCTTTGAAGACTACAAGAAGAATGAGA ACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGT ACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTG ATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGT TAACATACATGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGTTAA GACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCA CCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTA ATAGAAATCAACCATTTACATAAAAACTCATTGGAATCCTTTTTGACAAATCGTGTGATT CTGCCTGTGTAAGCATGATTTACTGCATTCTGATTCTGCCTTGTGTTTTCAAAAAAAAA



consensusID : consensus_16480#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence
                              [GTTGCTGCTCATCCATGGCACGNTCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTAAAATTCCTAGAGGCAGCAAGGTTAAGTATGATTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTANCCACAACANCTATGGNTTCAGTCCACGGACACTTTGTNGAGGACGGTGANCNNATTGACGTCCTNGTCCNTGTTNANGNAGAATNTNNNNNGGGNGNNTTNCTNNGNGNATNGGTTNGNGNNGAGGNTGTTGNTNTNNNAGGGGGGTNAANGNNNTGTAANGNNGTNTTTTATTTTTTTTTTTATNGATTGATTTTTTTTTTGTNTTNANATATTATNTNNTATTTTTTATTNNTATTNTGTAGTTANGGGTGTTTTATTTATTNANTTTTTTATTATNTTNTAATTATGTNGTGGTTNNGTNANTTTTNNGNATATNGNANTTTNTAATNTATNTATAATTNTATTNTTTNNTATTATTANTATATTANATTTTTNTATTATTNTTANANNTTGTTTNGTTTATNAANNTTNGNNNGTATGATTAGTTNNNNTTGTTTTTANANATAATTGNTNNGGGNGGTTTGNTTTTTNG]

[+] EMBL AU096951             [GTTGCTGCTCATCCATGGCACGNTCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTAAAATTCCTAGAGGCAGCAAGGTTAAGTATGATTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTANCCACAACANCTATGGNTTCAGTCCACGGACACTTTGTNGAGGACGGTGANCNNATTGACGTCCTNGTCCNTGTTNANGNAGAATNTNNNNNGGGNGNNTTNCTNNGNGNATNGGTTNGNGNNGAGGNTGTTGNTNTNNNAGGGGGGTNAANGNNNTGTAANGNNGTNTTTTATTTTTTTTTTTATNGATTGATTTTTTTTTTGTNTTNANATATTATNTNNTATTTTTTATTNNTATTNTGTAGTTANGGGTGTTTTATTTATTNANTTTTTTATTATNTTNTAATTATGTNGTGGTTNNGTNANTTTTNNGNATATNGNANTTTNTAATNTATNTATAATTNTATTNTTTNNTATTATTANTATATTANATTTTTNTATTATTNTTANANNTTGTTTNGTTTATNAANNTTNGNNNGTATGATTAGTTNNNNTTGTTTTTANANATAATTGNTNNGGGNGGTTTGNTTTTTNG]


>consensus_16480#1 GTTGCTGCTCATCCATGGCACGNTCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAAC TGTGTGGTTAAAATTCCTAGAGGCAGCAAGGTTAAGTATGATTTGGATAAGGCAACTGGT CTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTANCCACAACANCTATGGNTT CAGTCCACGGACACTTTGTNGAGGACGGTGANCNNATTGACGTCCTNGTCCNTGTTNANG NAGAATNTNNNNNGGGNGNNTTNCTNNGNGNATNGGTTNGNGNNGAGGNTGTTGNTNTNN NAGGGGGGTNAANGNNNTGTAANGNNGTNTTTTATTTTTTTTTTTATNGATTGATTTTTT TTTTGTNTTNANATATTATNTNNTATTTTTTATTNNTATTNTGTAGTTANGGGTGTTTTA TTTATTNANTTTTTTATTATNTTNTAATTATGTNGTGGTTNNGTNANTTTTNNGNATATN GNANTTTNTAATNTATNTATAATTNTATTNTTTNNTATTATTANTATATTANATTTTTNT ATTATTNTTANANNTTGTTTNGTTTATNAANNTTNGNNNGTATGATTAGTTNNNNTTGTT TTTANANATAATTGNTNNGGGNGGTTTGNTTTTTNG



consensusID : consensus_16480#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 452
fasta sequence
                              [GCCGCTTCTTTGAAGACTCCAAGAAGAATGAGAACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTTTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAAAAAAAAAAAAAAAAAGAGAAAAAAAAAAAAAAA]

[-] EMBL CF293618             [GCCGCTTCTTTGAAGACTCCAAGAAGAATGAGAACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTCTACGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTAAAAAA                         ]
[+] EMBL AU197884             [                 TCCAAGAAGAATGAGAACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTTTANGGCGCCTACATCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTNTCATCAATAGTACGACATATGTTAACATACATGGTNTAAAACCAGTACTTCGGGGATATATACCTTNTACTATTCATGTTAAGACAAGAAGCAGCNCCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCNCCTGACCCCTTTGNTGAACTNTNTGCTGCCCAAACCGNCAGTTTGNTGAACGGTTACCTAATAGAAATCANCCATTTNCATAAAAAAAAAAAAA                         ]
[+] EMBL AU222673             [                            TGAGAACAAAGAAGTTGCTGTCAATGAGTTTCTCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTTTACGGNGCCTACATCATTGAGAGCTTGAGGAAGTGATNTCCAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTNTCATCAATAGTACGACATATGTTAACATACATGGTNTAAAACCAGTACTTCGGGGATATATACCTTNTACTATTCATGTTAAGACAAGAAGCAGCNCCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTNCATAAAAAAAAAAAAA                         ]
[+] EMBL AU163558             [                                                                                                                                           acttcCTCAAGCTGATCAACTGCAGAGGCTACATGATTCACTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA                                 ]
[+] EMBL AU096952             [                                                                                                                                                  CCAGTTGATCAACTGCAGAGGNTACATGATTCATTGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAGGCTAAAAA                          ]
[-] EMBL BF475220             [                                                                                                                                                                                                                                                       TATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGNTGAACTNTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCANCCATTTCCATAAAAAAAAAAAAAAAAAAAAGAGAAAAAAAAAAAAAAA]


>consensus_16480#2 GCCGCTTCTTTGAAGACTCCAAGAAGAATGAGAACAAAGAAGTTGCTGTCAATGAGTTTC TCCCAGCAGAAGATGCCATCAACGCAATCAAGTACTCAATGGACCTTTACGGCGCCTACA TCATTGAGAGCTTGAGGAAGTGATCTCCAGCTGATCAACTGCAGAGGCTACATGATTCAC TGAACAGTTTCTCATCAATAGTACGACATATGTTAACATACATGGTCTAAAACCAGTACT TCGGGGATATATACCTTCTACTATTCATGTTAAGACAAGAAGCAGCACCTTTTCTTTCCA TGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCT GCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAAA AAAAAAAAAAAAAAGAGAAAAAAAAAAAAAAA



consensusID : consensus_16480#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence
                              [GACTGGACTGAAGGAGTAGAAAAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCNCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGACACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCCTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCACGCACACTTTGTGAGGACGGTGACCCCATGGGACGTCCTC]

[+] EMBL CF294606             [GACTGGACTGAAGGAGTAGAAAAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCNCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGACACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCCTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCACGCACACTTTGTGAGGACGGTGACCCCATGGGACGTCCTC]


>consensus_16480#3 GACTGGACTGAAGGAGTAGAAAAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTT TCNCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCC GCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCT CTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGACAC GATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTAGA GGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTGTT CCTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCACGCACACTTTGTGAG GACGGTGACCCCATGGGACGTCCTC



consensusID : consensus_16480#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [GACTACAGAGAAGAATGAGAACAAAAGAAGTATGCTGTCAATGAGTTTCTCCCAGCAGAAGATAGCCATGCAACCGCGAGATCCAGAGTACCTCCAAGTGGACCCTCTCTCACGGCGCCTACATGCACTTGAGAGCTTCGAGGAAGTCGATCTCCAGCTGATCACCTGCAGAGGCTACATGATTCATCTGAACACGTTTCTCATCAATAGTACTGACATATCGTTAACATACATCGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGGTTAAGACAAGAAGCAGCACCTGTTCTGTGTACCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA]

[+] EMBL BI799783             [GACTACAGAGAAGAATGAGAACAAAAGAAGTATGCTGTCAATGAGTTTCTCCCAGCAGAAGATAGCCATGCAACCGCGAGATCCAGAGTACCTCCAAGTGGACCCTCTCTCACGGCGCCTACATGCACTTGAGAGCTTCGAGGAAGTCGATCTCCAGCTGATCACCTGCAGAGGCTACATGATTCATCTGAACACGTTTCTCATCAATAGTACTGACATATCGTTAACATACATCGGTCTAAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGGTTAAGACAAGAAGCAGCACCTGTTCTGTGTACCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTTTGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAACCATTTACATAAAAA]


>consensus_16480#4 GACTACAGAGAAGAATGAGAACAAAAGAAGTATGCTGTCAATGAGTTTCTCCCAGCAGAA GATAGCCATGCAACCGCGAGATCCAGAGTACCTCCAAGTGGACCCTCTCTCACGGCGCCT ACATGCACTTGAGAGCTTCGAGGAAGTCGATCTCCAGCTGATCACCTGCAGAGGCTACAT GATTCATCTGAACACGTTTCTCATCAATAGTACTGACATATCGTTAACATACATCGGTCT AAAACCAGTACTTCGGGGATATATACCTTCTACTATTCATGGTTAAGACAAGAAGCAGCA CCTGTTCTGTGTACCATGTATGCCATGTCAGATACTCGGGTCCCAAGCACCTGACCCCTT TGCTGAACTCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTAATAGAAATCAA CCATTTACATAAAAA



consensusID : consensus_16480#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 176
fasta sequence
                              [NAGATACTCGGNTCCCAAGCNCTTGACCCCTTNGCTGAACTCTCTGCTGCCCAANCCGACNGTTTGCTGAACGGTTACCTAATAGNAATCAACNATTTACATAAAGGCTCATTGGAATCCTTTTTGACAAATCGTGTNATNCTGCCTGTGTAAGCATGATTTACTGCATTCAAAAA]

[+] EMBL AU077591             [NAGATACTCGGNTCCCAAGCNCTTGACCCCTTNGCTGAACTCTCTGCTGCCCAANCCGACNGTTTGCTGAACGGTTACCTAATAGNAATCAACNATTTACATAAAGGCTCATTGGAATCCTTTTTGACAAATCGTGTNATNCTGCCTGTGTAAGCATGATTTACTGCATTCAAAAA]


>consensus_16480#5 NAGATACTCGGNTCCCAAGCNCTTGACCCCTTNGCTGAACTCTCTGCTGCCCAANCCGAC NGTTTGCTGAACGGTTACCTAATAGNAATCAACNATTTACATAAAGGCTCATTGGAATCC TTTTTGACAAATCGTGTNATNCTGCCTGTGTAAGCATGATTTACTGCATTCAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      CTCGCCGAGATACCAATCGAGACTAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCG 60
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      TTTCGCTTCTCCTCCTCCTCCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCT 120
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      CCGCCATGGCTGGAGAAGCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTG 180
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      CTCTCAACGAGCGCATCCTTTCTTCCATGTCTCAAAAACATGTTGCTGCTCATCCATGGC 240
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      ACGATCTGGAGATAGGTCCAGGAGCTCCAGCAGTTTTCAACTGTGTGGTTGAAATTCCTA 300
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      GAGGCAGCAAGGTTAAGTATGAGTTGGATAAGGCAACTGGTCTAATTAAGGTTGATCGTG 360
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      TTCTTTACTCATCTGTTGTTTACCCACACAACTATGGTTTCATTCCACGCACACTTTGTG 420
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      AGGACGGTGACCCCATGGACGTCCTCGTCCTGATGCAGGAACAAGTTGTCCCTGGATGTT 480
consensus_16480#1      ------------------------------------------------------------
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      TCCTGCGAGCTCGTGCTATTGGGCTCATGCCTATGATTGATCAGGGTGAGAAAGATGACA 540
consensus_16480#1      ------------GTTGCTGCTCATCCATGGCACGNTCTGGAGATAGGTCCAGGAGCTCCA 48
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ------------------------------------------------------------
consensus_16480#4      ------------------------------------------------------------
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      AGATCATAGCTGTTTGTGCTGATGACCCTGAATACCGCCACTTCAGGGACATCAAGGAAA 600
consensus_16480#1      GCAGTTTTCAACTGTGTGGTTAAAATTCCTAGAGGCAGCAAGGTTAAGTATGATTTGGAT 108
consensus_16480#3      ------------------------------------------------------------
                                                                                   

consensus_16480#2      ---------------------------GCCGCTTCTTTGAAGACTCCA-AGAAGAATGAG 32
consensus_16480#4      -----------------------------------------GACTACAGAGAAGAATGAG 19
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      TCCCCCCTCACCGCCTTCAAGAGATCCGCCGCTTCTTTGAAGACTACA-AGAAGAATGAG 659
consensus_16480#1      AAGGCAACTGGTCTAATTAAGGTTGATCGTGTTCTTTACTCATCTGTTGTTTANCCACAA 168
consensus_16480#3      -----------------------------------------GACTGGACTGAAGGAGTAG 19
                                                                                   

consensus_16480#2      AACAAA-GAAGT-TGCTGTCAATGAGTTTCTCCCAGCAGAAGAT-GCCAT----CAACGC 85
consensus_16480#4      AACAAAAGAAGTATGCTGTCAATGAGTTTCTCCCAGCAGAAGATAGCCATGCAACCGCGA 79
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      AACAAA-GAAGT-TGCTGTCAATGAGTTTCTCCCAGCAGAAGAT-GCCAT----CAACGC 712
consensus_16480#1      CANCTATGGNTTCAGTCCACGGACACTTTGTNGAGGACGGTGANCNNATTG--ACGTCCT 226
consensus_16480#3      AAAAGACAGGACAGGCGGACGCGAGCGTCGTCCTCTTCGTTTCNCTTCTCC--TCCTCCT 77
                                                                                   

consensus_16480#2      AATC--AAGTACTC---AATGGACCTTT----ACGGCGCCTACAT-CA-TTGAGAGCTT- 133
consensus_16480#4      GATCCAGAGTACCTCCAAGTGGACCCTCTCTCACGGCGCCTACATGCACTTGAGAGCTTC 139
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      AATC--AAGTACTC---AATGGACCTCT----ACGGCGCCTACAT-CA-TTGAGAGCTT- 760
consensus_16480#1      NGTCCNTGTTNANGN--AGAATNTNNNNNGGGNGNNTTNCTNNGNGNATNGGTTNGNGNN 284
consensus_16480#3      CCTCCGCCTCCGCTCTCGCGAGATCTCCTGATCGACTCGCTCCGCCA--TGGCTGGAGAA 135
                                                                                   

consensus_16480#2      GAGGAAGT-GATCTCCAGCTG--ATCAACTGCAGAGGCTACATGATTCA-CTG------- 182
consensus_16480#4      GAGGAAGTCGATCTCCAGCTG--ATCACCTGCAGAGGCTACATGATTCATCTG------- 190
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      GAGGAAGT-GATCTCCAGCTG--ATCAACTGCAGAGGCTACATGATTCA-CTG------- 809
consensus_16480#1      GAGGNTGTTGNTNTNNNAGGGGGGTNAANGNNNTGTAANGNNGTNTTTTATTTTTTTTTT 344
consensus_16480#3      GCTGATGGAAAAGCCCCACTGGGATCAAGATACCCCCCTGCTGCTCTCAACG-------- 187
                                                                                   

consensus_16480#2      -AACA-GTTTCTCATCAATAGTAC-GACATAT-GTTAACATACAT-GGTCTAAAACCAGT 237
consensus_16480#4      -AACACGTTTCTCATCAATAGTACTGACATATCGTTAACATACATCGGTCTAAAACCAGT 249
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      -AACA-GTTTCTCATCAATAGTAC-GACATAT-GTTAACATACAT-GGTCTAAAACCAGT 864
consensus_16480#1      TATNGATTGATTTTTTTTTTGTNTTNANATATTATNTNNTATTTTTTATTNNTATTNTGT 404
consensus_16480#3      -AGCGCATCCTTTCTTCCATGTCTCAAAA----ACATGTTGCTGCTCATCCATGACACG- 241
                                                                                   

consensus_16480#2      ACTTCGGGGATATATACCTTCTACTATTCATG-TTAAGACAAGAAGCAGCACCTTTTCTT 296
consensus_16480#4      ACTTCGGGGATATATACCTTCTACTATTCATGGTTAAGACAAGAAGCAGCACCTGTTCTG 309
consensus_16480#5      ------------------------------------------------------------
consensus_16480#0      ACTTCGGGGATATATACCTTCTACTATTCATG-TTAAGACAAGAAGCAGCACCTTTTCTT 923
consensus_16480#1      AGTTANGGGTGTTTTATTTATTNANTTTTTTA-TTATNTTNTAATTATGTNGTGGTTNNG 463
consensus_16480#3      ATCTGGAGATAGGTC------CAGGAGCTCCA-GCAGTTTTCAACTGTGTGGT------- 287
                                                                                   

consensus_16480#2      T---CCATGTATGCCATGTCAGATACTCGGGTCCCAAG-CACCTGACCCCTTTGCTGAAC 352
consensus_16480#4      TGTACCATGTATGCCATGTCAGATACTCGGGTCCCAAG-CACCTGACCCCTTTGCTGAAC 368
consensus_16480#5      -------------------NAGATACTCGGNTCCCAAG-CNCTTGACCCCTTNGCTGAAC 40
consensus_16480#0      T---CCATGTATGCCATGTCAGATACTCGGGTCCCAAG-CACCTGACCCCTTTGCTGAAC 979
consensus_16480#1      T---NANTTTTNNGNATATNGNANTTTNTAATNTATNTATAATTNTATTNTTTNNTATTA 520
consensus_16480#3      T---GAAATTCCTAGAGGCAGCAAGGTTAAGTATGAGT-TGGATAAGGCAACTGGTCTAA 343
                                             *   *    *           *           *    

consensus_16480#2      TCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTA----ATAGAAATCAACCAT 408
consensus_16480#4      TCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTA----ATAGAAATCAACCAT 424
consensus_16480#5      TCTCTGCTGCCCAANCCGACNGTTTGCTGAACGGTTACCTA----ATAGNAATCAACNAT 96
consensus_16480#0      TCTCTGCTGCCCAAACCGACAGTTTGCTGAACGGTTACCTA----ATAGAAATCAACCAT 1035
consensus_16480#1      TTANTATATTANATTTTTNTATTATTNTTANANNTTGTTTNGTTTATNAANNTTNGNNNG 580
consensus_16480#3      TTAAGGT----TGATCGTGTTCCTTACTCATCTGTTGTTTA-CCCACACAACTATGGTTT 398
                       *                       *  * *    **   *     *      *       

consensus_16480#2      TTACATAAAAAAAAAAAAAAAAAAAAGAGAAAAAAAAAAAAAAA---------------- 452
consensus_16480#4      TTACATAAAAA------------------------------------------------- 435
consensus_16480#5      TTACATAAAGGCTCATTGGAATCCTTTTTGACAAATCGTGTNATNCTGCCTGTGTAAGCA 156
consensus_16480#0      TTACATAAAAACTCATTGGAATCCTTTTTGACAAATCGTGTGATTCTGCCTGTGTAAGCA 1095
consensus_16480#1      TATGATTAGTTNNNNTTGTTTTTANANATAATTGNTNNGGGNGGTTTGNTTTTTNG---- 636
consensus_16480#3      CATTCCACGCACACTTTGT----GAGGACGGTGACCCCATGGGACGTCCTC--------- 445
                                                                                   

consensus_16480#2      --------------------------------------------
consensus_16480#4      --------------------------------------------
consensus_16480#5      TGATTTACTGCATTCAAAAA------------------------ 176
consensus_16480#0      TGATTTACTGCATTCTGATTCTGCCTTGTGTTTTCAAAAAAAAA 1139
consensus_16480#1      --------------------------------------------
consensus_16480#3      --------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)