cluster # 1649

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Oryza sativa
cluster # 1649 cluster # 1649 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1649#0 length = 511 sequences # 2

consensusID : consensus_1649#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 511
fasta sequence

                              [ATCTACCTCTTCATGCTACCCGTACCTCAACACCAGCTCCTCGGGTGAGGA-GCCTCGCGCGACCCCAAGTACGGCGGCACGGCCGAGGAGTTCCTGCCGCCCAAGGCGCTCGATGGCTCGCCCCAGCCCTTGCCCCGCGCGTCGGGCAAGAACTCGCCCGGCGGCAACCGCCAGCTGTACGACACCCTGTACACCGTCACGGCAACCATCACCAACACCGGCAAGCTCGTGGGCGAAGAGGTGCCGCAGTTGTACGTGTCGCACGGCGGCCCCGAGGACCCGCCCGTCGTCCTGCGCGGCTTCGAGCGCATCCGTCTCGACCCCGGCCACGAGCGCCACCTTCAAGGTCGACCTGACCA-GGAGGGACGTCAGCAACTGGGACGTCAAGGTCCAGGACTGGGTCATCTCTGAGCACCCCAAGAAGGTGTTTGTCGGAAGCAGCAGCAGGAAGCTCCATCTGAGTGCTGACCTGAACTGAGCNCCNTGTGCATAAAGAAACAAGAAAAAAAAA]

[+] EMBL BM422107             [ATCTACCTCTTCATGCTACCCGTACCTCAACACCAGCTCCTCGGGTGAGGA GCCTCGCGCGACCCCAAGTACGGCGGCACGGCCGAGGAGTTCCTGCCGCCCAAGGCGCTCGATGGCTCGCCCCAGCCCTTGCCCCGCGCGTCGGGCAAGAACTCGCCCGGCGGCAACCGCCAGCTGTACGACACCCTGTACACCGTCACGGCAACCATCACCAACACCGGCAAGCTCGTGGGCGAAGAGGTGCCGCAGTTGTACGTGTCGCACGGCGGCCCCGAGGACCCGCCCGTCGTCCTGCGCGGCTTCGAGCGCATCCGTCTCGACCCCGGCCACGAGCGCCACCTTCAAGGTCGACCTGACCA GGAGGGACGTCAGCAACTGGGACGTCAAGGTCCAGGACTGGGTCATCTCTGAGCACCCCAAGAAGGTGTTTGTCGGAAGCAGCAGCAGGAAGCTCCATCTGAGTGCTGACCTGAACTGAGCNCCNTGTGCATAAAGAAACAAGAAAAAAAAA]
[+] EMBL BM038776             [               CTACCCGTACCTCAACACCAGCTCCTCGGGTGAGGAGGCCTCGCGCGACCCCAAGTACGGCGGCACGGCCGAGGAGTTCCTGCCGCCCAAGGCGCTCGATGGCTCGCCCCAGCCCTTGCCCCGCGCGTCGGGCAAGAACTCGCCCGGCGGCAACCGCCAGCTGTACGACACCCTGTACACCGTCACGGCAACCATCACC ACACCGGCAAGCTCGTGGGCGAAGAGGTGCCGCAGTTGTACGTGTCGCACGGCGGCCCCGAGGACCCGCCCGTCGTCCTGCGCGGCTTCGAGCGCATCCGTCTCGACCCCGGCCA GAGCGCCACCTTCAAGGTCGACCTGACCACGGAGGGACGTCAGCAACTGGGACGTCAAGGTCCAGGACTGGGTCATCTCTGAGCACCCCAAGAAGGTGTTTGTCGGAAGCAGCAGCAGGAAGCTCCATCTGAGTGCTGACCTGAACTGAGCTCCTTGTGCATAAAGAAAC AGAAAAAAAAA]




>consensus_1649#0
ATCTACCTCTTCATGCTACCCGTACCTCAACACCAGCTCCTCGGGTGAGGAGCCTCGCGC
GACCCCAAGTACGGCGGCACGGCCGAGGAGTTCCTGCCGCCCAAGGCGCTCGATGGCTCG
CCCCAGCCCTTGCCCCGCGCGTCGGGCAAGAACTCGCCCGGCGGCAACCGCCAGCTGTAC
GACACCCTGTACACCGTCACGGCAACCATCACCAACACCGGCAAGCTCGTGGGCGAAGAG
GTGCCGCAGTTGTACGTGTCGCACGGCGGCCCCGAGGACCCGCCCGTCGTCCTGCGCGGC
TTCGAGCGCATCCGTCTCGACCCCGGCCACGAGCGCCACCTTCAAGGTCGACCTGACCAG
GAGGGACGTCAGCAACTGGGACGTCAAGGTCCAGGACTGGGTCATCTCTGAGCACCCCAA
GAAGGTGTTTGTCGGAAGCAGCAGCAGGAAGCTCCATCTGAGTGCTGACCTGAACTGAGC
NCCNTGTGCATAAAGAAACAAGAAAAAAAAA

clustalw multiple alignements is not computed in this case