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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1650 cluster # 1650       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1650#0 length = 1100 sequences # 2  

consensusID : consensus_1650#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1100
fasta sequence
                              [CCATCCAATGCCCCTTGTTGCTGCAACCTCATTTAGATCTCATCCTTCTCTTCATATATACATGCATACTGCTATAAGTCTACTGTACGTCTACCACAGCTTGCAGCCATAAAGCTCTTCGTCCTCTCTCTTTCTACGGCTGTGGAGCTGAAGCATGGCCTAGCTGAGCTAGCAGCTGGTTCTTGGTTATATAAAGAGAGATAGCTAGGATCAAGAGAGAGGCAGATGGCATGGAGAGGTGTTGCAATGTGCATTGGATGTGTAGATAGAGCCTGCAGATCTCGATCGATCTCTTCAAGTCCATGCCATGCCTTTCCACAGCTTTCTTGAACTTCTCTTGTGCCTCACTCACTTTCATTACTGGAGAGATATGCATCATCAGTGGAAGCTTATAGGGAGAGGAGTGCAAGAAGAGGGTCAAGAAAGCTGTGGGAAGAAATGGCATTACAAGGACTTTGAATTCAGTTAGCAATGCCATGAGACAGGC----AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTGATGCTAATTTTCCATTTCATGTAAGTTAGCTTTTCATAATTAGATCAAGTTTTCTCTACTTAATTTGGTGCCCTTTTTGCTTACGTTTTTTTTTCGCTGGGAGGTTTTGCTTACTTAATTTAAGTGCCTGCTAGTTTCTTTTTGCTAGTCCAGCTAGCCACTGCATACTTAAATTTTATATCTGCCACTGTCAGCTCCAATTATTTGTCGTTTGTTTTTTCAAACAACAGTCTGCATGCATTTCGGCATCAATAGAGGACCATCACTGTGTAGCTCGATCATTGTAGCTCATGAAATTGATGTCTCTTCCGTAAAGGCGTCTTCACTTTTTTCTCTTACCATGCATATCATGCATCAAGGCTAAAAAGGAATTCAACCTTTTCCATTTTGCTTTGCTTAGTACTACAGTACCATGTAGGGCTCCTCGCATGCATGACAAGAAATGCAGCAAGATTGTGGTGTTGAGTTTGAATACTCAATGGGAGCAGTATATAGCCGATCTTGATGAATTTATCATCACGGAATGTGTCTATGTTTTTCTTTTTTGAAATAATCAATGTTAAGTGCATT]

[+] EMBL AK062523             [CCATCCAATGCCCCTTGTTGCTGCAACCTCATTTAGATCTCATCCTTCTCTTCATATATACATGCATACTGCTATAAGTCTACTGTACGTCTACCACAGCTTGCAGCCATAAAGCTCTTCGTCCTCTCTCTTTCTACGGCTGTGGAGCTGAAGCATGGCCTAGCTGAGCTAGCAGCTGGTTCTTGGTTATATAAAGAGAGATAGCTAGGATCAAGAGAGAGGCAGATGGCATGGAGAGGTGTTGCAATGTGCATTGGATGTGTAGATAGAGCCTGCAGATCTCGATCGATCTCTTCAAGTCCATGCCATGCCTTTCCACAGCTTTCTTGAACTTCTCTTGTGCCTCACTCACTTTCATTACTGGAGAGATATGCATCATCAGTGGAAGCTTATAGGGAGAGGAGTGCAAGAAGAGGGTCAAGAAAGCTGTGGGAAGAAATGGCATTACAAGGACTTTGAATTCAGTTAGCAATGCCATGAGACAGGC    AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTGATGCTAATTTTCCATTTCATGTAAGTTAGCTTTTCATAATTAGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK069236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAATTCAGTTAGCAATGCCATGAGACAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTGATGCTAATTTTCCATTTCATGTAAGTTAGCTTTTCATAATTAGATCAAGTTTTCTCTACTTAATTTGGTGCCCTTTTTGCTTACGTTTTTTTTTCGCTGGGAGGTTTTGCTTACTTAATTTAAGTGCCTGCTAGTTTCTTTTTGCTAGTCCAGCTAGCCACTGCATACTTAAATTTTATATCTGCCACTGTCAGCTCCAATTATTTGTCGTTTGTTTTTTCAAACAACAGTCTGCATGCATTTCGGCATCAATAGAGGACCATCACTGTGTAGCTCGATCATTGTAGCTCATGAAATTGATGTCTCTTCCGTAAAGGCGTCTTCACTTTTTTCTCTTACCATGCATATCATGCATCAAGGCTAAAAAGGAATTCAACCTTTTCCATTTTGCTTTGCTTAGTACTACAGTACCATGTAGGGCTCCTCGCATGCATGACAAGAAATGCAGCAAGATTGTGGTGTTGAGTTTGAATACTCAATGGGAGCAGTATATAGCCGATCTTGATGAATTTATCATCACGGAATGTGTCTATGTTTTTCTTTTTTGAAATAATCAATGTTAAGTGCATT]


>consensus_1650#0 CCATCCAATGCCCCTTGTTGCTGCAACCTCATTTAGATCTCATCCTTCTCTTCATATATA CATGCATACTGCTATAAGTCTACTGTACGTCTACCACAGCTTGCAGCCATAAAGCTCTTC GTCCTCTCTCTTTCTACGGCTGTGGAGCTGAAGCATGGCCTAGCTGAGCTAGCAGCTGGT TCTTGGTTATATAAAGAGAGATAGCTAGGATCAAGAGAGAGGCAGATGGCATGGAGAGGT GTTGCAATGTGCATTGGATGTGTAGATAGAGCCTGCAGATCTCGATCGATCTCTTCAAGT CCATGCCATGCCTTTCCACAGCTTTCTTGAACTTCTCTTGTGCCTCACTCACTTTCATTA CTGGAGAGATATGCATCATCAGTGGAAGCTTATAGGGAGAGGAGTGCAAGAAGAGGGTCA AGAAAGCTGTGGGAAGAAATGGCATTACAAGGACTTTGAATTCAGTTAGCAATGCCATGA GACAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTGATGCTAATTT TCCATTTCATGTAAGTTAGCTTTTCATAATTAGATCAAGTTTTCTCTACTTAATTTGGTG CCCTTTTTGCTTACGTTTTTTTTTCGCTGGGAGGTTTTGCTTACTTAATTTAAGTGCCTG CTAGTTTCTTTTTGCTAGTCCAGCTAGCCACTGCATACTTAAATTTTATATCTGCCACTG TCAGCTCCAATTATTTGTCGTTTGTTTTTTCAAACAACAGTCTGCATGCATTTCGGCATC AATAGAGGACCATCACTGTGTAGCTCGATCATTGTAGCTCATGAAATTGATGTCTCTTCC GTAAAGGCGTCTTCACTTTTTTCTCTTACCATGCATATCATGCATCAAGGCTAAAAAGGA ATTCAACCTTTTCCATTTTGCTTTGCTTAGTACTACAGTACCATGTAGGGCTCCTCGCAT GCATGACAAGAAATGCAGCAAGATTGTGGTGTTGAGTTTGAATACTCAATGGGAGCAGTA TATAGCCGATCTTGATGAATTTATCATCACGGAATGTGTCTATGTTTTTCTTTTTTGAAA TAATCAATGTTAAGTGCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)