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Oryza sativa
cluster # 16545 cluster # 16545       Sequences # 36       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16545#0 length = 948 sequences # 26  
consensus_16545#1 length = 767 sequences # 2  
consensus_16545#2 length = 713 sequences # 6  
consensus_16545#3 length = 580 sequences # 1  
consensus_16545#4 length = 573 sequences # 1  

consensusID : consensus_16545#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 948
fasta sequence
                              [TCACTATTAGGCCGAATTGGTTACCGGCCCCCCCTTCGAGTTCGACCCAC-GCTAGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG--TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA-AGAAGCACG-GCGA-GGAGGGCCACCAC-CACGACGGCCACAGCAGCAGCAGCAGCGA-CAGCGAC-T-GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG-ATTGG-AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG-CATGG-TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT-CCTGGCGTCAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAATGAAAACTCCAGGGGGGGCCCGGCACTGATGAATCCCCTAATGATTTGGGGAAAAATCATTAAGTTAAGGTGGATACACCTCTTGTCATATGATCAAATGGTTTCACGAAAACTCAATAATCTGACAACAAGATGGGCGAGACTCAATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATAACACTTAAAACGACTCAACGGCTTAACGTTGGCTTGCCACGCATTACTTGACTGCAAAACTCTC]

[+] EMBL C98117               [TCACTATTAGGCCGAATTGGTTACCGGCCCCCCCTTCGAGTTCGACCCAC GCTTCCGCATTAGC ATCCATTCCGATCCATC AATTTCTCTTGAGACCNTAGAGAGAGAGAGAGCCGCCAACCATGGCCGGCATNATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAAaanaa                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF312564             [                                            caCCACAGCTAGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAG AAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATT                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF314321             [                                               aca GCTAGATCATTAGAAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACGNGCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGGNAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATATGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAG AAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCT                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF312869             [                                                     TAGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF309677             [                                                      AGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGN AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTAATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCCTGGCGTCAAAAAAAAAAAAAAAAAAAAAAAAACAC                                                                                                                                                                                                                                                                 ]
[+] EMBL CF311062             [                                                      AGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGAATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAAG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK059150             [                                                      AGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTA                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF312113             [                                                        ATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OS1321703            [                                                            TTAGCAATCCATTCCGATCCATCAAATTTNTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TNGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU063551             [                                                                   TCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGAC GCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGTCTT T TAGCCGCCNCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OS07292A             [                                                                   TCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACATGGNGAAGAAGGACANGANGANGANGAANGNGANNGAAGCACG NCGATGNAGGNCCACCAA CACGgccgggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU063530             [                                                                   TCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGNCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGNAGGCGAGCACAAGAAGGAAGACGAGCACAAGNAGGAGGGGGAGCACCANAAGAAGGACGGGGAGCACAAGGAAGGCG  TNGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGTCGACGTCGtn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C73175               [                                                                        TCCGNTCCATCAAATTTTTNTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGNTCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGANGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB680476             [                                                                        TCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCTCAAGATTGAGGAGAAGCTCCACATGGGCGGAGGGGAGCACAAGAAGGAAGCCGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGCCGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGGCCACGGCGACGGCGGCGAGCTCAAGGAGAAGAAGGCCAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCCCCTC CTCGTCGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGGGCCCCCACACCGGCGCCGTGCGTGTGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTTGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATTTGTGCTTGATTGCAAGAAAAAAAAAAGGCCATGG TTTGCCCTTGTGATGTTCTGATAATAATGGCTACAGGGTGCCTTGTAATAAG                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU032908             [                                                                         CCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGAC GCGGCGA NACAAGGAGAAGAAGG CAAGAAGAAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU068318             [                                                                                ATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CA CGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AB011368             [                                                                                 TCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCTACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT CCT                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSPMS3               [                                                                                  CAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTAT                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C29013               [                                                                                                  CCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCNGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTCGAGAAGATCAAGGACAAGATCACCGGCGACCACNGCNACGCNGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGANGGAGA AGAAGCACG GCNT GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGACCAGTCAT TNGAGCCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF312565             [                                                                                                                               GGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCACNCACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGCGTATTAaaaaaa                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF303885             [                                                                                                                                                                                 AGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTTTTTTTTTTTTTATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGACCCCCGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGNGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGT                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF309678             [                                                                                                                                                                                                ACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCCCAAGGAGAAGAAGGCCAAGAAGAAGAAGAAGGAGA AGAAGCCCG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAT T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTAATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT CCTGGCGTCAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                ]
[+] EMBL AU065874             [                                                                                                                                                                                                    GCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCG  TGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CA CGGCTT NAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGNAAAAAAAAAGG CATGGTTTTGCCTTTGTGATGTACTGATAATAATTGCTTCACGGTGCCTTGTAATAAGACCGTTAATTATG                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU223284             [                                                                                                                                                                                                                                                  GAAGGCG  TGGTGGAGAAGATCAAGGNCAAGATCNCCGGCGACCACGGCGACGGCGGCGAGCCCAAGGAGAAGAAGGCCAAGAAGAAGAAGAAGGAGA AGAAGCCCG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTNGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT CCTGGCGTCAAAAAAAA                                                                                                                                                                                                                                                                                     ]
[+] EMBL BE228775             [                                                                                                                                                                                                                                                              TGGAGAAGATCAANGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAANGACAAGAAGAA AAGAANGAGA AGAAGCACG GCGA GGANGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTNATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB684741             [                                                                                                                                                                                                                                                                                                                                               AGGAGA AGAAGCACG GCGA GGAGGGCCACCAC CACGACGGCCACAGCAGCAGCAGCAGCGA CAGCGAC T GAGCCGCCGCGCCCCCACACCGGAGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATG ATTGG AGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGG CATGG TTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAT CCTGGCGTCGAAAAGAAAAAAAAAATAAAAAAAAGAAAAAAAAATGAAAACTCCAGGGGGGGCCCGGCACTGATGAATCCCCTAATGATTTGGGGAAAAATCATTAAGTTAAGGTGGATACACCTCTTGTCATATGATCAAATGGTTTCACGAAAACTCAATAATCTGACAACAAGATGGGCGAGACTCAATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATAACACTTAAAACGACTCAACGGCTTAACGTTGGCTTGCCACGCATTACTTGACTGCAAAACTCTC]


>consensus_16545#0 TCACTATTAGGCCGAATTGGTTACCGGCCCCCCCTTCGAGTTCGACCCACGCTAGATCAT TAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCC AACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCA CAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAA GGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGA GCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCA CCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACA CCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCA GGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTG CTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGC TGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGC GTCAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAATGAAAACTCCAGGGGGGGCCCG GCACTGATGAATCCCCTAATGATTTGGGGAAAAATCATTAAGTTAAGGTGGATACACCTC TTGTCATATGATCAAATGGTTTCACGAAAACTCAATAATCTGACAACAAGATGGGCGAGA CTCAATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATAACACTTAAAACGACTC AACGGCTTAACGTTGGCTTGCCACGCATTACTTGACTGCAAAACTCTC



consensusID : consensus_16545#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 767
fasta sequence
                              [ATTTCTAGTTTCCATAAGAGGTTTACTGGCTGGACGGACATACATGTATAAACCAGTTTCCAAGTTCCAGCCATTTTGCAACTAATGCAAAACCTATATGAGAAAGACCTATAGACCTCGTGCCGAATTCCGCACGAGGTTCCCATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCTAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAACACCAGCACAATAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAACGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAACAAGGACAAGAAGAAGAAGAACGACAACAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCACGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTNATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAANNNNNNNNNNNNNNNNNNNNNNNAAAAAACTC]

[+] EMBL CB682930             [ATTTCTAGTTTCCATAAGAGGTTTACTGGCTGGACGGACATACATGTATAAACCAGTTTCCAAGTTCCAGCCATTTTGCAACTAATGCAAAACCTATATGAGAAAGACCTATAGACCTCGTGCCGAATTCCGCACGAGGTTCCCATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCTAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAACACCAGCACAATAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAACGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAACAAGGACAAGAAGAAGAAGAACGACAACAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCACGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCT                                                                       ]
[+] EMBL CA753842             [                                                                                                                                          aTTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTNATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAANNNNNNNNNNNNNNNNNNNNNNNAAAAAACTC]


>consensus_16545#1 ATTTCTAGTTTCCATAAGAGGTTTACTGGCTGGACGGACATACATGTATAAACCAGTTTC CAAGTTCCAGCCATTTTGCAACTAATGCAAAACCTATATGAGAAAGACCTATAGACCTCG TGCCGAATTCCGCACGAGGTTCCCATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAG AGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCTAGGAGAAGCTCCACATGGGCGG AGGCGAGCACAAGAAGGAACACCAGCACAATAAGGAGGGGGAGCACCACAAGAAGGACGG GGAGCACAAGGAACGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGA CGGCGGCGAGCACAAGGAGAACAAGGACAAGAAGAAGAAGAACGACAACAAGCACGGCGA GGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGC GCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAG TTCGTAGCACGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCAT GTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGAT AATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTNATTATGATGAAATTGATGTGTAT TATCCTGGCGTCAAANNNNNNNNNNNNNNNNNNNNNNNAAAAAACTC



consensusID : consensus_16545#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 713
fasta sequence
                              [ATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCG-AC-TGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAG-AAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAAAAGATGTGTATTAAAAAAAAGTCACCACGGTGCTTCAGATTCTTATGCTTTTCCGGTTTCTGTGGGTTATGATCCGTCTGAGTGTGGAAACTGTATGATGTGAACTTTATTTCTCCCCTTCTTAATTGAAATTAGTAGAGCTCCTGCCCTTTTTCGTAGAAAAAAAAAAA]

[+] EMBL AF010584             [ATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCG AC TGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAG AAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTAAAAAAAA                                                                                                                                                      ]
[+] EMBL AU172643             [                                                                                                                     CACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCNCGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCG AC TGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAG AAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAAAAaaaaa                                                                                                                                                                   ]
[+] EMBL AU182076             [                                                                                                                                   CGGGGAGCCCAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCNCCGGCGACCACGGCGACGGCGGCGAGCCCAAGGAGAAGAAGGGCAAGAAGAAGAAGAAGGAGAAGAAGCCCGGCGAGGAGGGCCNCCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCG NC TGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTTGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTNTCATGCATGTATCTGTGCTTGATTGCAAG AAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAAAAa                                                                                                                                                                       ]
[+] EMBL C74949               [                                                                                                                                             AAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACA CN NCTTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAA                                                                                                                                                                                                                                                                    ]
[+] EMBL AU057522             [                                                                                                                                                                                                                                                             anGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACA CGAAC TGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAAAA                                                                                                                                                                        ]
[-] EMBL CF312870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTAATGCCAA AAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGCGTCACCACGGTGCTTCAGATTCTTATGCTTTTCCGGTTTCTGTGGGTTATGATCCGTCTGAGTGTGGAAACTGTATGATGTGAACTTTATTTCTCCCCTTCTTAATTGAAATTAGTAGAGCTCCTGCCCTTTTTCGTAGAAAAAAAAAAA]


>consensus_16545#2 ATCAAATTTCTCTTGAGACCGTAGAGAGAGAGAGAGGCGCCAACCATGGCCGGCATCATC CACAAGATCGAGGAGAAGCTCCACATGGGCGGAGGCGAGCACAAGAAGGAAGACGAGCAC CACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACC GGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAG AAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGC GACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCA GATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGA TCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTT TGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATG AAAAAGATGTGTATTAAAAAAAAGTCACCACGGTGCTTCAGATTCTTATGCTTTTCCGGT TTCTGTGGGTTATGATCCGTCTGAGTGTGGAAACTGTATGATGTGAACTTTATTTCTCCC CTTCTTAATTGAAATTAGTAGAGCTCCTGCCCTTTTTCGTAGAAAAAAAAAAA



consensusID : consensus_16545#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 580
fasta sequence
                              [AGCCTGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTAGTTGTTGTGCAAGAAATTGAAGATATCTTTCTTTTTTCTGTTTTGTTGCTTTGCTTTGTTGATTTTCTGGTTAGGATCTGAAAATGTTGGCGTGTGACTGACATGATGCTAATTAATCTCTCTTGTGATAATATGTTTTTTGTTTTGCACGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCCAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAA]

[+] EMBL BI795762             [AGCCTGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTAGTTGTTGTGCAAGAAATTGAAGATATCTTTCTTTTTTCTGTTTTGTTGCTTTGCTTTGTTGATTTTCTGGTTAGGATCTGAAAATGTTGGCGTGTGACTGACATGATGCTAATTAATCTCTCTTGTGATAATATGTTTTTTGTTTTGCACGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCCAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAA]


>consensus_16545#3 AGCCTGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGCGGCGAGCACAA GGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACCA CGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCG CCGTGCGTGCGTGCATGCAGGTAGTTGTTGTGCAAGAAATTGAAGATATCTTTCTTTTTT CTGTTTTGTTGCTTTGCTTTGTTGATTTTCTGGTTAGGATCTGAAAATGTTGGCGTGTGA CTGACATGATGCTAATTAATCTCTCTTGTGATAATATGTTTTTTGTTTTGCACGGTGATG CTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCATACGTGATGCA GTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCCAGAAAAAAAAAAGGCATGGTTTG CCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTAT GATGAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAA



consensusID : consensus_16545#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence
                              [GTCATGAGAGCCATCGACAAGGATCTCAGGCTCGACAATCGGCACCAGCCCGTTCTCCCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACNCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF324052             [GTCATGAGAGCCATCGACAAGGATCTCAGGCTCGACAATCGGCACCAGCCCGTTCTCCCGGAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGGGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCGAGGAGGGCCACCACNCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAAAAAAAAAAA]


>consensus_16545#4 GTCATGAGAGCCATCGACAAGGATCTCAGGCTCGACAATCGGCACCAGCCCGTTCTCCCG GAGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACG GGGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCG ACGGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGAAGGAGAAGAAGCACGGCG AGGAGGGCCACCACNCACGACGGCCACAGCAGCAGCAGCAGCGACAGCGACTGAGCCGCC GCGCCCCCACACCGGCGCCGTGCGTGCGTGCATGCAGGTGATGCTGCAGATGATTGGAGG AGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTGATCTGTCTCATGC ATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCTTTGTGATGTACTG ATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGATGAAATTGATGTGT ATTATCCTGGCGTCAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16545#0      ------------------------------------------------------------
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      ATTTCTAGTTTCCATAAGAGGTTTACTGGCTGGACGGACATACATGTATAAACCAGTTTC 60
consensus_16545#2      ------------------------------------------------------------
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      ---------TCACTATTAGGCCGAATTGGTTACCGGCCCCCCCTTCGAGTTCGACCCACG 51
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      CAAGTTCCAGCCATTTTGCAACTAATGCAAAACCTATATGAGAAAGACCTATAGACCTCG 120
consensus_16545#2      ------------------------------------------------------------
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      CTAGATCATTAGCAATCCATTCCGATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAG 111
consensus_16545#4      ------------------------------------------------------GTCATG 6
consensus_16545#1      TGCCGAATTCCGCACGAGGTTCCCATCCATCAAATTTCTCTTGAGACCGTAGAGAGAGAG 180
consensus_16545#2      ----------------------------ATCAAATTTCTCTTGAGACCGTAGAGAGAGAG 32
consensus_16545#3      ----------------------------------AGCCTGTGGAGAAGATCAAGGACAAG 26
                                                                                  *

consensus_16545#0      AGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGG 171
consensus_16545#4      AGAGCCATCGACAAGGATC----TCAGGCTCGACAATCGGCACCAGC-CCGTTCTCCCGG 61
consensus_16545#1      AGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCTAGGAGAAGCTCCACATGGGCGG 240
consensus_16545#2      AGAGGCGCCAACCATGGCCGGCATCATCCACAAGATCGAGGAGAAGCTCCACATGGGCGG 92
consensus_16545#3      ATCACCGGCGACCACGGCGA-----CGCGGCGAGCACAAGGAGAAGAAGGACAAGAAGAA 81
                       *    *  * ** * *              * *      * *  **              

consensus_16545#0      AGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGG 231
consensus_16545#4      AGGCGAGCACAAGAAGGAAGACGAGCACAAGAAGGAGGGGGAGCACCACAAGAAGGACGG 121
consensus_16545#1      AGGCGAGCACAAGAAGGAACACCAGCACAATAAGGAGGGGGAGCACCACAAGAAGGACGG 300
consensus_16545#2      AGGCGAGCACAAGAAGGAAGAC------------------GAGCACCACAAGAAGGACGG 134
consensus_16545#3      GAAGAAGGAGAAGAAGCACGGCGAG---------------GAGGGCCACCACCACGACGG 126
                            ** * ****** *   *                  ***  **** *  * *****

consensus_16545#0      GGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGA 291
consensus_16545#4      GGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGA 181
consensus_16545#1      GGAGCACAAGGAACGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGA 360
consensus_16545#2      GGAGCACAAGGAAGGCGTGGTGGAGAAGATCAAGGACAAGATCACCGGCGACCACGGCGA 194
consensus_16545#3      CCACAGCA--GCAGCAGCAGCGACAGCGACTGAGCCGCCGCGCCCCCACACCGGCGCCGT 184
                         *   **  * *   *  * *     **   **     *  * **  *  *  ** ** 

consensus_16545#0      CGGCG-GCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGA-AGGAGAAGAAGCACGGC 349
consensus_16545#4      CGGCG-GCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGA-AGGAGAAGAAGCACGGC 239
consensus_16545#1      CGGCG-GCGAGCACAAGGAGAACAAGGACAAGAAGAAGAAGA-ACGACAACAAGCACGGC 418
consensus_16545#2      CGGCG-GCGAGCACAAGGAGAAGAAGGACAAGAAGAAGAAGA-AGGAGAAGAAGCACGGC 252
consensus_16545#3      GCGTGCGTGCATGCAGGTAGTTGTTGTGCAAGAAATTGAAGATATCTTTCTTTTTTCTGT 244
                         * * * *    ** * **     *  ******   ***** *            * * 

consensus_16545#0      GAGGAGGGCCACCACC-ACGACGGCCACAGCAGCAGCAGCAG----CGACA-GCGACTGA 403
consensus_16545#4      GAGGAGGGCCACCACNCACGACGGCCACAGCAGCAGCAGCAG----CGACA-GCGACTGA 294
consensus_16545#1      GAGGAGGGCCACCACC-ACGACGGCCACAGCAGCAGCAGCAG----CGACA-GCGACTGA 472
consensus_16545#2      GAGGAGGGCCACCACC-ACGACGGCCACAGCAGCAGCAGCAG----CGACA-GCGACTGA 306
consensus_16545#3      TTTGTTGCTTTGCTTTGTTGATTTTCTGGTTAGGATCTGAAAATGTTGGCGTGTGACTGA 304
                          *  *     *      **    *     ** * * * *      * *  * ******

consensus_16545#0      GCCGCCGC------GCCCCCACACCGGCGCCGTGCGTGCGTGCATGCA-GGTGATGCTGC 456
consensus_16545#4      GCCGCCGC------GCCCCCACACCGGCGCCGTGCGTGCGTGCATGCA-GGTGATGCTGC 347
consensus_16545#1      GCCGCCGC------GCCCCCACACCGGCGCCGTGCGTGCGTGCATGCA-GGTGATGCTGC 525
consensus_16545#2      GCCGCCGC------GCCCCCACACCGGCGCCGTGCGTGCGTGCATGCA-GGTGATGCTGC 359
consensus_16545#3      CATGATGCTAATTAATCTCTCTTGTGATAATATGTTTTTTGTTTTGCACGGTGATGCTGC 364
                          *  **        * *      *      **  *       **** ***********

consensus_16545#0      AGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTG 516
consensus_16545#4      AGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTG 407
consensus_16545#1      AGATGATTGGAGGAGTTCGTAGCACGATTAATTAGTATCTGTGCAATACGTGATGCAGTG 585
consensus_16545#2      AGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCAATACGTGATGCAGTG 419
consensus_16545#3      AGATGATTGGAGGAGTTCGTAGCAGGATTAATTAGTATCTGTGCA-TACGTGATGCAGTG 423
                       ************************ ******************** **************

consensus_16545#0      ATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCT 576
consensus_16545#4      ATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCT 467
consensus_16545#1      ATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCT 645
consensus_16545#2      ATCTGTCTCATGCATGTATCTGTGCTTGATTGCAAGAAAAAAAAAAGGCATGGTTTGCCT 479
consensus_16545#3      ATCTGTCTCATGCATGTATCTGTGCTTGATTGCCAGAAAAAAAAAAGGCATGGTTTGCCT 483
                       ********************************* **************************

consensus_16545#0      TTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGAT 636
consensus_16545#4      TTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGAT 527
consensus_16545#1      TTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTNATTATGAT 705
consensus_16545#2      TTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGAT 539
consensus_16545#3      TTGTGATGTACTGATAATAATGGCTGCACGGTGCCTTGTAATAAGAACGCTAATTATGAT 543
                       *************************************************** ********

consensus_16545#0      GAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAA 696
consensus_16545#4      GAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAAAAAAAAAAA-------------- 573
consensus_16545#1      GAAATTGATGTGTATTATCCTGGCGTCA--AANNNNNNNNNNNNNNNNNNNNNNNAAAAA 763
consensus_16545#2      GAAAAAGATGTGTATTAAAAAAAAGTCACCACGGTGCTTCAGATTCTTATGCTTTTCCGG 599
consensus_16545#3      GAAATTGATGTGTATTATCCTGGCGTCAAAAAAAAAA----------------------- 580
                       ****  ***********       ****  *                             

consensus_16545#0      AATGAAAACTCCAGGGGGGGCCCGGCACTGATGAATCCCCTAATGATTTGGGGAAAAATC 756
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      ACTC-------------------------------------------------------- 767
consensus_16545#2      TTTCTGTGGGTTATGATCCGTCTGAGTGTGGAAACTGTATGATGTGAACTTTATTTCTCC 659
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      ATTAAGTTAAGGTGGATACACCTCTTGTCATATGATCAAATGGTTTCACGAAAACTCAAT 816
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      ------------------------------------------------------------
consensus_16545#2      CCTTCTTAATTGAAATTAGTAGAGCTCCTGCCCTTTTTCGTAGAAAAAAAAAAA------ 713
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      AATCTGACAACAAGATGGGCGAGACTCAATATTTTACACGACTCTCTTTACCAATTCTGC 876
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      ------------------------------------------------------------
consensus_16545#2      ------------------------------------------------------------
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      CCCGAATAACACTTAAAACGACTCAACGGCTTAACGTTGGCTTGCCACGCATTACTTGAC 936
consensus_16545#4      ------------------------------------------------------------
consensus_16545#1      ------------------------------------------------------------
consensus_16545#2      ------------------------------------------------------------
consensus_16545#3      ------------------------------------------------------------
                                                                                   

consensus_16545#0      TGCAAAACTCTC 948
consensus_16545#4      ------------
consensus_16545#1      ------------
consensus_16545#2      ------------
consensus_16545#3      ------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)