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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16546#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 1499 fasta sequence
[AGCAACAGCTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC-TTCCTCGAGAAGAAAGATAGACCACCAC-TGACCTTCTC-TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT-GGGATAAC-TGCAAACCAAGGTTTCTACCT-CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC-AATAC-AGAACACAGTTCC-TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC-AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC-AGTTCTATCACTGACCTGC-ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA-GCCTTCACTGAAGAAGAC-CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT-GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG-ACA-GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC-GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC-AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG-C--CGGTG-CAG---GGAGGAGGAGACGACAT-CAGGAGG-CATCTGCTCGGACAA-GAAGATGCATCTCGCA-AAG-A-CGA-AG-AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA-----AGGGGCGTTCTTCA-CCAGTAATATGCATGATGATGTTGGAGTTGGAAA--ATATGTTGATGTCAGTGACTGTAC-TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA-ACAGTA-CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA-TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTGAACAATTAGCACATAAAAAAAA]
[+] EMBL AK061369 [AGCAACAGCTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGG ]
[+] EMBL AK104611 [ CAACAGCTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAAT ]
[+] EMBL AK104596 [ CAGCTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGC ]
[+] EMBL AK061406 [ CTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTG ]
[+] EMBL CF277122 [ CTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTC TAGGAATGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGAC ]
[+] EMBL OSS1543A [ CTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACC ]
[+] EMBL OSS3336A [ AGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCTNCCTAGGGCTGTATCACCTTTCACCAACTTATGGTTCTGCAAATAC AGAACACAGTTCCTTGCCA ]
[+] EMBL OSS1944A [ AGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGNGTGCTGGCCCTGCAGTTCCTGCTTGCAGAATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAG TTTTTCTTCTAGCACTNTGT GGGATAAC TNCAAACCAAGG TTCTACCT CC ANGGCTG ATCACC ]
[+] EMBL OSS11426A [ AGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTTATGCATGAGAAGGTGAAGCTGTTCATAGGNGTTCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTNTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAG ]
[+] EMBL OSS2334A [ GTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGNGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCACTTGACCTTCTC TTT ]
[+] EMBL OSS1956A [ GTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGNGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTCTTTTGCT ]
[+] EMBL CB685239 [ TAACCTTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGgc ]
[+] EMBL CB684623 [ TAGCATCACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGC ]
[+] EMBL OSS3278A [ ACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGGTTCTGC AATACAAGAACACAGTTNC TGCCATCACCTTTGCCATGGTTGCCGTCCTCAGGCTTGAGCAAGTAGGCCTAGGCAAGAGGCATGGGGTGG ]
[+] EMBL OSS3368A [ ACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCANTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCANGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGNCCTTCGCCTAC TTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCANCTTTCACCAACTTATGCTTCTn ]
[+] EMBL OSS3247A [ ACTGCATTTCTAGTTAAGTAACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGCAGTNATGCATGAGAAGGTGAAGCTGTTCATAGGNGTGCTGGCCCTGCAGTTCCTGCTTGCAGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCATCGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTACTTTCCTCGAGAAGAAAGATAGACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTCCTTCTAGCACTGTGTGGGGATAACTTGCAAACC ]
[+] EMBL AK099425 [ GACCACCAC TGACCTTCTC TTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCAC ]
[+] EMBL OSS4395A [ TTCTTCTAGCACTGTGT GGGATAAC TGCAAACCAAGGTTTCTACCT CCTAGGGCTGTATCACCTTTCACCAACTTATGCTTCTGC AATAC AGAACACAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTCAAGGTGCCAGTTCTGAAGAGGTACCCAGCTAAGGTTTCAAGTTCTATCACTGNCCTGCAATCTTTGGGNTTCTCCAGT ]
[+] EMBL CB685030 [ AGACCTTAGTTCC TGCCATCACCTTTGCCATGGCTGCCGTCCTCAGGCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTC AGGTGCCAGTTCTGAAGAGGTACCCAGCTAGGCTGTC AGTTCTATCACTGACCTGC ATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCA GCCTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGG ]
[+] EMBL BM038683 [ GGTC TT CACCCCTTCCCTGAAGAAGACTCTGAGCCGATGGAA GTGNACTCC GAAGCGATCTGGTTCAC ATCCTCTAC CTGGTCTTGTGGCATCT GC TGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGCCAGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC ATCGCCGTCAT GCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGCAAGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAG AACAATCTGCAGGACCAGTCATCGGTG CAGGGAGGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGGCAA GAAGATGCATCTCGCA AAG A CGA AG AANCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAGCTG AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA Aaaaaa ]
[-] EMBL CB685240 [ CTTCACTGAAGAAGAC CTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCT GTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCG ACA GGGGAGGGCCGCTGTTCACTGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCTGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACACCAACCTGCAGGACCAT C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATTTCGCA AAG A CGA AG AAGTTGCAGTCACTGATGAACTGGCATGACGATCGATGGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTCCCAGTGTAATTAAAA ACAGTA GTGCTAGCTGGTCCTCACTCCCCAGTGATATTCTA TATATAATTGTTAAGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGAAGGGGATATAATATTGCCATCcc ]
[+] EMBL BQ907273 [ CTACGCTGGTCTTGT GCATCTGGC TGGCGTTTGCTCTGCAGATATGGTGCATCGTACA GGGGA GGCC CTGTTCACC CCGTGTTCCAGCCGGTCCAGACCGTC CC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAAC C ATCTGCAGGACCAGTCATCGGTG CAGGGAGGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGGCAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAGCTG AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCA TATGTGTATATCTCAAGCTGTATATTCAGAGTTAATAATATAATATTGCCATAATTTGAAAAA ]
[+] EMBL BM038164 [ TGCATCG ACACGGGGA GGCC CTGTTCACC CCGTGTTCCA CC GTCCAGACCGTCGCCAGTC CCGTCAT GCC CCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGA C AGTTCTGATTGTGATC GGCTGTACTTCGT CTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAG AACAATCTGCAGGACCAGTCATCGGTG CAGGGAGGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGGCAA GAAGATGCATCTCGCANAAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAGCTG AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAaaaaaaaaa ]
[-] EMBL CF277123 [ TGCATCG ACA GGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA Aa ]
[+] EMBL AU174335 [ GGCCGCTGTTC CCNCCGTGTTCCAGCCGGTCCAGACCGTCGCC GTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGGGATCATCGGAGC AGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTNTTCACCCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTNTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTNAAAAAAA Aaaaaa a ]
[+] EMBL BM421136 [ TCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCCAAAGCGAGGAGAAGAAGAGCAAG AACAATCTGCAGGACCAGTCATCGGTGCCAGGGAGGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGGCAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAGCCTGAGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAACACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATNGCTCCGAATCAaaaaaaa ]
[+] EMBL AU222938 [ TGTACTTCGTGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTGAACAATTAGCACATAAAAAAAA]
[+] EMBL AU222933 [ TGCTGTGGGGCAAAAGCGAGGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAG C CGGTG CAG GGAGGAGGAGACGACAT CAGGAGG CATCTGCTCGGACAA GAAGATGCATCTCGCA AAG A CGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTGAACAATTAGCACATAAAAAAAA]
[+] EMBL AU097282 [ aGACCAG C CNGTT CAG GGANGAGGAGACGACATCCAGGAGGCCATCTGCTCGGACAATGAAGATGCATCTCGCA AAGNA CGANAGAAAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTGAACAATT ]
[+] EMBL BM421041 [ GG CATCTGCTCGGGCAA GAAGATGCATCTCGCANAAG ATCGA AG AAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAGCTG AGGGGCGTTCTTCA CCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGNGACTGTACTTTTCTTAACTATGTTAATCAAAGAAGAAGATCCCAGCGTGCCAGTGTAATTTAAA ACAGTATCTGCTAGCTGGTCCTCACTCACCAGTGATATACTAGTATATAATTGCTACGAATCAATATGTGTATATCTCAAGCTGTATATTCAGAGTTAATAATATAATATTGCCATAATTTGAACAGTTAGC CAAAAAAAAAA]
[+] EMBL AU033037 [ GACAA GAAGNTGCATCTCGCA AAG N CGA AG AAGCTGCAGTCACTGATGAANTGGCATGACGATCGATCGA AGGGGCGTTCTTCA CCAGTAATATGCATGNTGATGTTGGAGTTGGAAA ATATGTTGATGTCAGTGACTGTAC TTTCTNAACTATATTAATCAAAGNAGAAGNTCCAAGCGTGCCAGTGTAATTAAAA ACAGTA CTGCTAGCTGGTCCTCACTCACCAGTGATATACTA TATATAATTGCTACGAATCAGTCTGTGTATATCNCAAGCTGTATATTCAGAGTTAATGATATAAT ]
consensusID : consensus_16546#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence
[NGCCCTTCNGAANNANGAGCNTCGGTGCGTGCCACANTGATAACTCTCTACAAGGGCCTACACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTCCCGTGCCAGTTCTGAANANGTACCCAGCTAGGCTGTCAGTTCTATCACTGACCTGCATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCAGCCTTCACTGAAGAANACCTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCTGTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCNACAGGGGANGGCCGCTGTTCACCGCCGTGTCCANCCGGTCCANAACGTCGCCGTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAAGGATCATCGGANCATTCTGATTGTGATCGGGCTGTNCTTCCTGCTGTGGGGCCAAGCGAAGANAAAAAAAACAAGAACAATCTGCNGGAACAATCNTCCGTGCCGGGAAGAAGAAGANANNACATCNNGAAGCATCTGCTCCGGCAANAAAANACATCTCNCAAAAANA]
[+] EMBL AA751580 [NGCCCTTCNGAANNANGAGCNTCGGTGCGTGCCACANTGATAACTCTCTACAAGGGCCTACACTGTTCAATCACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTCCCGTGCCAGTTCTGAANANGTACCCAGCTAGGCTGTCAGTTCTATCACTGACCTGCATCTTTGGGCTCCTCCAGTTCCTGGTCATTGCAGCCTTCACTGAAGAANACCTGAGCAGATGGAAGGTGAACTCCGGAAGCGAGCTGTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCTGCAGATATGGTGCATCNACAGGGGANGGCCGCTGTTCACCGCCGTGTCCANCCGGTCCANAACGTCGCCGTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAAGGATCATCGGANCATTCTGATTGTGATCGGGCTGTNCTTCCTGCTGTGGGGCCAAGCGAAGANAAAAAAAACAAGAACAATCTGCNGGAACAATCNTCCGTGCCGGGAAGAAGAAGANANNACATCNNGAAGCATCTGCTCCGGCAANAAAANACATCTCNCAAAAANA]
consensusID : consensus_16546#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 454 fasta sequence
[AAGATAGATGCAAGAGACNNATCTGCAGGACCATGTCATCGGTGCAGTGGAGGAGGAGGAGACGACATCAGGAGGCATCTGCTTCGGGTCATAGTAAGATGCATCTCTTCAAAGACGAAGAAGCTGGCAGTGCACTGGATGGAATCTGGCATGACGATGCGATGCGAGCTGGAGGGGCGTGTGCTTGCACCCAGTGAATGATGGCATGATGGATGGTGTGGAGTTGGGAAAATGATGATGGTGTGGATGGTGCAGTGGACTGGGACTGTGTTGCTTGAACTGATGGTTGAATGCAAAAGAAGAAGATGCCAAGCGTGGCCACGTGGTGAATTGAAAAACAGNACNGCTAGCTGGTCCTCACNCACCAGGGAGATACTATATATAATTGCTACGAATCAATATGNNGTATATCTCAAGCTGTATATTCAGAGTTAATAATATAATATTGCCATAA]
[+] EMBL BQ907892 [AAGATAGATGCAAGAGACNNATCTGCAGGACCATGTCATCGGTGCAGTGGAGGAGGAGGAGACGACATCAGGAGGCATCTGCTTCGGGTCATAGTAAGATGCATCTCTTCAAAGACGAAGAAGCTGGCAGTGCACTGGATGGAATCTGGCATGACGATGCGATGCGAGCTGGAGGGGCGTGTGCTTGCACCCAGTGAATGATGGCATGATGGATGGTGTGGAGTTGGGAAAATGATGATGGTGTGGATGGTGCAGTGGACTGGGACTGTGTTGCTTGAACTGATGGTTGAATGCAAAAGAAGAAGATGCCAAGCGTGGCCACGTGGTGAATTGAAAAACAGNACNGCTAGCTGGTCCTCACNCACCAGGGAGATACTATATATAATTGCTACGAATCAATATGNNGTATATCTCAAGCTGTATATTCAGAGTTAATAATATAATATTGCCATAA]
consensusID : consensus_16546#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence
[TCTGGATTGTGATCCGGCCTGTTACCTTCGTGCCTTTGGGCCACAAATCGAAGGAGAAAGTAAAGACGCACAGGACACATCTCGCCAGGACCCACGTCATCGTCCACGGGATGAGGAGGAGACGACATCAGGAGGCATCTGCTCGGGCACAGAAGATGCATCTCGCAAAGACGAAGAAGCTGCAGTCACCTGATGAACTGGCATGACGATCGATCGAGCTGAGGGGCGTTCTTCACCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCCAAGAAGAAGATCCCAGCGTGCCAGTGTAATTAAAAACAGTACTGCTAGCTGGTCCTCACTCACCAGTGATATACTATATATAATTGCTACGAATCAATATGTGTATAAAAAAAAAA]
[+] EMBL BI807905 [TCTGGATTGTGATCCGGCCTGTTACCTTCGTGCCTTTGGGCCACAAATCGAAGGAGAAAGTAAAGACGCACAGGACACATCTCGCCAGGACCCACGTCATCGTCCACGGGATGAGGAGGAGACGACATCAGGAGGCATCTGCTCGGGCACAGAAGATGCATCTCGCAAAGACGAAGAAGCTGCAGTCACCTGATGAACTGGCATGACGATCGATCGAGCTGAGGGGCGTTCTTCACCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATATGTTGATGTCAGTGACTGTACTTTTCTTAACTATGTTAATCCAAGAAGAAGATCCCAGCGTGCCAGTGTAATTAAAAACAGTACTGCTAGCTGGTCCTCACTCACCAGTGATATACTATATATAATTGCTACGAATCAATATGTGTATAAAAAAAAAA]
consensusID : consensus_16546#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 272 fasta sequence
[GACCAGCCGNTGNCAGGGAGGAGGAGACGACATCAGGAGGCATCTGCTCGGACAAGAAGATGCATCTCGCAAAGACGAAGAAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAAGGGGCGTTCTTCACCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATGTTGATCGTCAGTGACTGTACTTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU097129 [GACCAGCCGNTGNCAGGGAGGAGGAGACGACATCAGGAGGCATCTGCTCGGACAAGAAGATGCATCTCGCAAAGACGAAGAAGCTGCAGTCACTGATGAACTGGCATGACGATCGATCGAAGGGGCGTTCTTCACCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATGTTGATCGTCAGTGACTGTACTTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU097272 [ ACGACATCAGGAGGCATCTGCTCGGANAAGNAGATGCATCTCGCAAAGACGAAGAAGCTGCAGTNANTGATGNACTGGCATGACGATCGATCGNAGGGGCGTTCTTCACCAGTAATATGCATGATGATGTTGGAGTTGGAAAATATGTTGAT GTCAGTGACTGTACTTTCTTAACTATATTAATCAAAGAAGAAGATCCAAGCGTGCCAGTGTAAAAAAAAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 AGCAACAGCTTAGCTAGTAACAGTAGGCCACTACTAGCATCACTGCATTTCTAGTTAAGT 60
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 AACAACACTAGAGAGAGTAAGGAGTAGTGAGACCATGGGGAGGGATCAGGCAGCTGCAGC 120
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 AGTGATGCATGAGAAGGTGAAGCTGTTCATAGGAGTGCTGGCCCTGCAGTTCCTGCTTGC 180
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 AGGATTCCACATTGTGAGCAGGGCAGCACTCAACATGGGCATCAGCAAGATTGTGTTCAT 240
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 CGTCTATAGGAACCTCATCTCCCTCGCCTTGCTCGCGCCCTTCGCCTACTTCCTCGAGAA 300
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GAAAGATAGACCACCACTGACCTTCTCTTTGCTGGTGGAGTTTTTTCTTCTAGCACTGTG 360
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 TGGGATAACTGCAAACCAAGGTTTCTACCTCCTAGGGCTGTATCACCTTTCACCAACTTA 420
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 TGCTTCTGCAATACAGAACACAGTTCCTGCCATCACCTTTGCCATGGCTGCCGTCCTCAG 480
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GCTTGAGCAAGTAGACCTAGGCAAGAGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGT 540
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GAGCATAGGTGGTGCCACAGTGATAACTCTCTACAAGGGCCTACCACTGTTCAATCACAA 600
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 TCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGCTGCGT 660
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 CTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTCAGGTGCCAGTTCT 720
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GAAGAGGTACCCAGCTAGGCTGTCAGTTCTATCACTGACCTGCATCTTTGGGCTCCTCCA 780
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GTTCCTGGTCATTGCAGCCTTCACTGAAGAAGACCTGAGCAGATGGAAGGTGAACTCCGG 840
consensus_16546#1 ------------------------------------------------------------
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 AAGCGAGCTGTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTTTGCTCT 900
consensus_16546#1 -------------------------------------------------NGCCCTTCNGA 11
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ------------------------------------------------------------
consensus_16546#0 GCAGATATGGTGCATCGACAGGGGAGGGCCGCTGTTCACCGCCGTGTTCCAGCCGGTCCA 960
consensus_16546#1 ANNANGAGCNTCGGTGCGTGCCACANTGATAACTCTCTACAAGGGCCTACACTGTTCAAT 71
consensus_16546#2 ------------------------------------------------------------
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 -----------------------------------------------------TCTGGAT 7
consensus_16546#0 GACCGTCGCCGTCGCCGTCATGGCCGCCATCATTCTCGGAGATCAGCTATACTCAGGAGG 1020
consensus_16546#1 CACAATCTGAACATCAAGTCCCTGTCTTCCTCGAGCCTCATCCTCAACTGGACTCTGGGC 131
consensus_16546#2 -----------------------------------------------------AAGATAG 7
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 TGTGATCCGGCCTGTTACCTTCGTGCCTTTGGGCCACAAATCGAAGGAGAAAGTAAAGAC 67
consensus_16546#0 GATCATCGGAGCAGTTCTGATTGTGATCGGGCTGTACTTCGTGCTGTGGGGCAAAAGCGA 1080
consensus_16546#1 TGCGTCTTCATCCTTGGCCACTGCCTCTCATGGTCTGGATGGATGGTTCTTCCCGTGCCA 191
consensus_16546#2 ATGCAAGAGACNNATCTGCAG-GACC-ATGTCATCGGT-GCAGTGGAGGAGGAGGAGACG 64
consensus_16546#4 -------------------------------GACCAGCCGNTGNCAGGGAGGAGGAGACG 29
consensus_16546#3 GCACAGGACACATCTCGCCAG-GACCCACGTCATCGTC--CACGGGATGAGGAGGAGACG 124
consensus_16546#0 GGAGAAGAAGAGCAAGAACAACAACCTGCAGGACCAGCCGGTGC-AGGGAGGAGGAGACG 1139
consensus_16546#1 GTTCTGAANANGTACCCAGCTAGGCT-GTCAGTTCTATCACTGACCTGCATCTTTGGGCT 250
* * * *
consensus_16546#2 ACATCAGGAGGCATCTGCTTCGGGTCATAGTAAGATGCATCTCTTCAAA--GACGAAGAA 122
consensus_16546#4 ACATCAGGAGGCATCTGCTCGG----ACAAGAAGATGCATCTCG-CAAA--GACGAAGAA 82
consensus_16546#3 ACATCAGGAGGCATCTGCTCGGG--CACAG-AAGATGCATCTCG-CAAA--GACGAAGAA 178
consensus_16546#0 ACATCAGGAGGCATCTGCTCGG----ACAAGAAGATGCATCTCG-CAAA--GACGAAGAA 1192
consensus_16546#1 CCTCCAGTTCCTGGTCATTGCAGCCTTCACTGAAGAANACCTGAGCAGATGGAAGGTGAA 310
* *** * * * * ** ** * ** * ***
consensus_16546#2 G-CTGGCAGTGCACTGGATGGAATCTGGCATGACGATGCGATGCGAGCTGGAGGGGCGTG 181
consensus_16546#4 G-CTG-CAGT-CACTG-ATGAA--CTGGCATGACGAT-CGAT------CGAAGGGGCGT- 128
consensus_16546#3 G-CTG-CAGT-CACCTGATGAA--CTGGCATGACGAT-CGAT--CGAGCTGAGGGGCGT- 229
consensus_16546#0 G-CTG-CAGT-CACTG-ATGAA--CTGGCATGACGAT-CGAT------CGAAGGGGCGT- 1238
consensus_16546#1 CTCCGGAAGCGAGCTGTTCACAATCCTCTACGCTGGTCTTGTGGCATCTGGCGTGGCGTT 370
* * ** * * * * * * * * * *****
consensus_16546#2 TG-CTTGCACCCAGTGAATGATGGCATG--ATGGATGGTGTG----GAGTTGGGAAAATG 234
consensus_16546#4 ---TCTTCACC--------AGTAATATG--CATGATGATGTT----GGAGTTGGAAAATA 171
consensus_16546#3 ---TCTTCACC--------AGTAATATG--CATGATGATGTT----GGAGTTGGAAAATA 272
consensus_16546#0 ---TCTTCACC--------AGTAATATG--CATGATGATGTT----GGAGTTGGAAAATA 1281
consensus_16546#1 TGCTCTGCAGATATGGTGCATCNACAGGGGANGGCCGCTGTTCACCGCCGTGTCCANCCG 430
* ** * * * * *** * * *
consensus_16546#2 ATG-ATGGTGTGGATGGTGCAGTGGACTGGGACTGTGTTGCT-TGAACTGATGGTTGAAT 292
consensus_16546#4 --------TGTTGATCGT-CAGTG-------ACTGTACTTTC-TTAACTAT--ATTAATC 212
consensus_16546#3 T------ATGTTGAT-GT-CAGTG-------ACTGTACTTTTCTTAACTAT--GTTAATC 315
consensus_16546#0 --------TGTTGAT-GT-CAGTG-------ACTGTACTTTC-TTAACTAT--ATTAATC 1321
consensus_16546#1 GTCCANAACGTCGCCGTCGCCGTC-ATGGCCGCCATCATTCTCGGAGATCAGCTATACTC 489
** * * ** * * * * * *
consensus_16546#2 GCAAAAGA-----AGAAGATGCCAAGCGTGGCCACGTGGTGAAT-------TGAAAAACA 340
consensus_16546#4 ---AAAGA-----AGAAGAT-CCAAGCGTGCCAGTGTAAAAAAA-------AAAAAAAAA 256
consensus_16546#3 ---CAAGA-----AGAAGAT-CCCAGCGTGCCAGTGTAAT------------TAAAAACA 354
consensus_16546#0 ---AAAGA-----AGAAGAT-CCAAGCGTGCCAGTGTAAT------------TAAAAACA 1360
consensus_16546#1 AGGAAGGATCATCGGANCATTCTGATTGTGATCGGGCTGTNCTTCCTGCTGTGGGGCCAA 549
* ** ** ** * * *** * *
consensus_16546#2 GNACNGCTAGCTGGTCCTCACNCACCAGGGAGATACTATATATAATTGCTACGAATCAAT 400
consensus_16546#4 AAAAAAAAAAAAAAAA-------------------------------------------- 272
consensus_16546#3 GTACTGCTAGCTGGTCCTCACTCACCAGTGATATACTATATATAATTGCTACGAATCAAT 414
consensus_16546#0 GTACTGCTAGCTGGTCCTCACTCACCAGTGATATACTATATATAATTGCTACGAATCAGT 1420
consensus_16546#1 GCGAAGANAAAAAAAACAAGAACAATCTGCNGGAACAAT-CNTCCGTGCCGGGAAGAAGA 608
*
consensus_16546#2 ATGNNGTATATCTCAAGCTGTATATTCAGAGTTAATAATATAATATTGCCATAA------ 454
consensus_16546#4 ------------------------------------------------------------
consensus_16546#3 ATGTGTATAAAAAAAAAA------------------------------------------ 432
consensus_16546#0 CTGTG-TATATCTCAAGCTGTATATTCAGAGTTAATGATATAATATTGCCATCACTTGAA 1479
consensus_16546#1 AGANANNACATCNNGAAGCATCTGCTCCGGCAANAAAANACATCTCNCAAAAANA----- 663
consensus_16546#2 --------------------
consensus_16546#4 --------------------
consensus_16546#3 --------------------
consensus_16546#0 CAATTAGCACATAAAAAAAA 1499
consensus_16546#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||