These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1660#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 4236 fasta sequence [CCCGCTGCCTCACCGCATATTCGCCTCCCCCGACAGCAACAGCGACTACGGTGGCGACGGACTCTATCGATGGCGACAACGACGCGGCGGCGGTCGCGGACGAGCGCGGCGTCGGCGGCGGTCGCGGACGAGCGTGGCGTCAGCGGCGACGGTCGCGGACGAGCGCGGCGGCGACGGCGGCGGATGCGGACGAGCGCGGCGACGGCGGCGGCGGCGGCAGCGGACGCGGATGAGGGCGGCGGTGGCGGAGGTCGCGGTCGAGGGCGGCGGCGGACCACGCACGCGGAAGGTTCCCCTTCAGATTCCATCATTGAAGAAGCAGCTAGATAAACCACAAGAACCATCGTCCACGCTGGGAGGCAAGGCATCATCAGTCAAGCAGAAGCAATAGCTAGGTTGGCGCATGCCGTAGGCTGGGTTATCGACTTCCTGCCTGAGAAGAACTTTACGAAGCAAGAGCAAGGCATGAAGTGTGTTTTTCTTTGATTCATGTGCTCTTAACAGTGTTACTTACAGATCTATCAGGCTTTCAGGAAACATATATGCTCTTTATCCCACTAAGGTATAATATTTTCTTTTCTCTCTCCATCGATTGTGTATATAGATTCCACTGTTGGATAGCAGTCCCACGATGCATCTGCATGATGATTCATATAATTGGCTAACCAGTGTGCAGTTTTTATCAATGTGTAATTTACTGGATACTCAATTATGCAGATGCCATGCCCAGCAATTGTATAAGAACTGTAAGACTTGATCAATGTTTTTTTTAATGTATATGATTGGCATTGTGGTTTTCTGTAGGCTTCTGTCAGACTTGATCTGTTGAAACCAACCACAAATGTGCTACCCTTTTTTCCGGTCATGGTGCTGCTACCATATTCATATGCAAAAGAAGAAATACTCTGTTGCTTAAATAAGGAACGCTTTCTTTTTTCATATATAAGTAGTATTCATATTCTTCTATCTCATATTACAGTTTTGCTCATATGGAAATAGAGATAGTTAGATGAATAAATTTGAAGATCGTCATGGGCTCATTAATTCATTGTGGCCTTACTTTCAGGTTCTTACCTACCTTTCCCTCAGGCAAGTGTGCTACAAACTTTTTGGTGACAAAAGAGAGTTTATATATGTGGTCCGGGGCACATTTATTTTCTTTAGTGAACCAACTTTACACTGAGATTTATGCTACATGTCTTCCTTCACAGTAGAATTATTATCGGTTTTGATGTTTTTAGTACTTATAGAATGGACATCTCAATCAGAATGTTTCTTCCAAACTGACGAACAGAAGTTTTTTTTTTCATGGTGTTTGCTGGACTTACAGGTCAAATGCTATTTTATTTTTTGGAAGTCGATTGACAAACCGTGCATTCATCTCCGCTCATCTCCAAATGATAACATAAAATCTATTACGTAATTTGTTGTTTGATAACTTTAGAGTAGTGATAACTGGTATTTTTATTTTTCTCATGATGGGTTTATAATTTTACCTTTGAACAGTTCTTTGACTATGTGATTGTCTGGCCTAGGTGACGTTGGTGATGAGCTGTGAGCATACACTTCTATATCTTATTATTTTTAGTTCTAAAATTAATTATGCTGTACTATTCTTTGTTTTCAGAAATTGAATGGTTTGTCAGATTTTTATTCAAAAATATTATATTTTCTTTTCACAAATTGAACATAGAGTACCGTCTCACACGCTGCTCATCATGTTTTTTATACTTTAATGTACACACGAACTATATAGTTAATGCTATTTTTCTTCTTTCATTAAGCCATACCGTTTTAATTATTTATAGCTCTATGGTCCACATTGTCCTTTGTGTCCCATCATCTTAGTTTTTTCCTTTAGACGATCAAGCAATATTTGATCTAAAATATCATAAAGCAAATCATCTCAATTGCTTATAGTTTTCTCGATGATTATAAAATATGCAATTATATGAAGCATACAAAATCGTGTCATTTAGTTGAAAGAACACATCTTCATCTTATATTTATTTTCTATGTTTATCATACGAAATTCCCGTAGCAATGCGCGGGGTTTCATCTAGTATAAAAAGGAGGAGTTGCCCCCCTCCAATCCCACATGCTAAATCACCCGGATCAATCCCTACCGTCCATCCGTATCTGCATCGCCATGATCTACGATCCCTACCGTCCAGTGTCCACCACGATTTCACCCTCTCCACCGCGCAAACACCGCGAGAAGACTACGCCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGCTGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCGCCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGAGGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGTTCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAGCCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTGTCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGCAGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGTGGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGTGGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTATGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAGGTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATAAGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCAATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAGATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTCCTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCACTGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGTTCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTGGACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCATTCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAGTAAATAGGCATTTGTAAGTGTGGCATCCGATGGTTATATGCTATGGTCATTTTTCATTAAACGTTGACTCAACTTTGTGGTATGTTTTCAGTTTTGTTTAGCCATTAAACTTTGGAGGAACTACAGACTAAACTTGTAGATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTTTAGTATTCAGTAATCTTGATTTCAGGTAAATTAAATATCATTGCACAATCAAGAAATATATTTTGTTAATGTTTGCAATAACTTGAATGGTGGTAACCTTCTGTTTCAGCTTGTCAATTTGATGCGTGATTGGGTTTTCAGGGTCAGAGCAACAAGCGTGAATGCGTGATTGAGCGGATACACTACTGAGGTTCTTGAGAGTAAATATAATGTTGTATTTCTTCTTTCATAATTAACATTTTCACTAATATATTTCAGCAATTTACATGGTATGGATGTCCTTCTTTAGTATATTTACTTTTGTTAACTATATAAAATTACATATATGCCAAGTTGTTATATATTTTCAGAAAGCTTGCATTATTCAACGAGTTCAATGATAGGAGGCTAGATATATAGATTAAATTGAATGGAATTATATTTAACTATCTCTGGATGGTGCTTCATGCCTCCATGTGATGTTCATGTCATATTGCAGGTACTCATCATTGAGTTTCTTGGCAAGATCGATCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCAATAGCTCTTGTTTTACATGGACCTGTAATGCAAAAGGCCAAACTGAATTACCTTATTTTACACCAATATTTCAGGTTCGTTTCC] [+] EMBL AK120126 [CCCGCTGCCTCACCGCATATTCGCCTCCCCCGACAGCAACAGCGACTACGGTGGCGACGGACTCTATCGATGGCGACAACGACGCGGCGGCGGTCGCGGACGAGCGCGGCGTCGGCGGCGGTCGCGGACGAGCGTGGCGTCAGCGGCGACGGTCGCGGACGAGCGCGGCGGCGACGGCGGCGGATGCGGACGAGCGCGGCGACGGCGGCGGCGGCGGCAGCGGACGCGGATGAGGGCGGCGGTGGCGGAGGTCGCGGTCGAGGGCGGCGGCGGACCACGCACGCGGAAGGTTCCCCTTCAGATTCCATCATTGAAGAAGCAGCTAGATAAACCACAAGAACCATCGTCCACGCTGGGAGGCAAGGCATCATCAGTCAAGCAGAAGCAATAGCTAGGTTGGCGCATGCCGTAGGCTGGGTTATCGACTTCCTGCCTGAGAAGAACTTTACGAAGCAAGAGCAAGGCATGAAGTGTGTTTTTCTTTGATTCATGTGCTCTTAACAGTGTTACTTACAGATCTATCAGGCTTTCAGGAAACATATATGCTCTTTATCCCACTAAGGTATAATATTTTCTTTTCTCTCTCCATCGATTGTGTATATAGATTCCACTGTTGGATAGCAGTCCCACGATGCATCTGCATGATGATTCATATAATTGGCTAACCAGTGTGCAGTTTTTATCAATGTGTAATTTACTGGATACTCAATTATGCAGATGCCATGCCCAGCAATTGTATAAGAACTGTAAGACTTGATCAATGTTTTTTTTAATGTATATGATTGGCATTGTGGTTTTCTGTAGGCTTCTGTCAGACTTGATCTGTTGAAACCAACCACAAATGTGCTACCCTTTTTTCCGGTCATGGTGCTGCTACCATATTCATATGCAAAAGAAGAAATACTCTGTTGCTTAAATAAGGAACGCTTTCTTTTTTCATATATAAGTAGTATTCATATTCTTCTATCTCATATTACAGTTTTGCTCATATGGAAATAGAGATAGTTAGATGAATAAATTTGAAGATCGTCATGGGCTCATTAATTCATTGTGGCCTTACTTTCAGGTTCTTACCTACCTTTCCCTCAGGCAAGTGTGCTACAAACTTTTTGGTGACAAAAGAGAGTTTATATATGTGGTCCGGGGCACATTTATTTTCTTTAGTGAACCAACTTTACACTGAGATTTATGCTACATGTCTTCCTTCACAGTAGAATTATTATCGGTTTTGATGTTTTTAGTACTTATAGAATGGACATCTCAATCAGAATGTTTCTTCCAAACTGACGAACAGAAGTTTTTTTTTTCATGGTGTTTGCTGGACTTACAGGTCAAATGCTATTTTATTTTTTGGAAGTCGATTGACAAACCGTGCATTCATCTCCGCTCATCTCCAAATGATAACATAAAATCTATTACGTAATTTGTTGTTTGATAACTTTAGAGTAGTGATAACTGGTATTTTTATTTTTCTCATGATGGGTTTATAATTTTACCTTTGAACAGTTCTTTGACTATGTGATTGTCTGGCCTAGGTGACGTTGGTGATGAGCTGTGAGCATACACTTCTATATCTTATTATTTTTAGTTCTAAAATTAATTATGCTGTACTATTCTTTGTTTTCAGAAATTGAATGGTTTGTCAGATTTTTATTCAAAAATATTATATTTTCTTTTCACAAATTGAACATAGAGTACCGTCTCACACGCTGCTCATCATGTTTTTTATACTTTAATGTACACACGAACTATATAGTTAATGCTATTTTTCTTCTTTCATTAAGCCATACCGTTTTAATTATTTATAGCTCTATGGTCCACATTGTCCTTTGTGTCCCATCATCTTAGTTTTTTCCTTTAGACGATCAAGCAATATTTGATCTAAAATATCATAAAGCAAATCATCTCAATTGCTTATAGTTTTCTCGATGATTATAAAATATGCAATTATATGAAGCATACAAAATCGTGTCATTTAGTTGAAAGAACACATCTTCATCTTATATTTATTTTCTATGTTTATCATACGAAATTCCCGTAGCAATGCGCGGGGTTTCATCTAGTATAAAAAGGAGGAGTTGCCCCCCTCCAATCCCACATGCTAAATCACCCGGATCAATCCCTACCGTCCATCCGTATCTGCATCGCCATGATCTACGATCCCTACCGTCCAGTGTCCACCACGATTTCACCCTCTCCACCGCGCAAACACCGCGAGAAGACTACGCCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGCTGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCGCCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGAGGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGTTCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAGCCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTGTCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGCAGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGTGGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGTGGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTATGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAGGTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATAAGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCAATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAGATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTCCTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCACTGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGTTCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTGGACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCATTCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAGTAAATAGGCATTTGTAAGTGTGGCATCCGATGGTTATATGCTATGGTCATTTTTCATTAAACGTTGACTCAACTTTGTGGTATGTTTTCAGTTTTGTTTAGCCATTAAACTTTGGAGGAACTACAGACTAAACTTGTAGATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTTTAGTATTCAGTAATCTTGATTTCAGGTAAATTAAATATCATTGCACAATCAAGAAATATATTTTGTTAATGTTTGCAATAACTTGAATGGTGGTAACCTTCTGTTTCAGCTTGTCAATTTGATGCGTGATTGGGTTTTCAGGGTCAGAGCAACAAGCGTGAATGCGTGATTGAGCGGATACACTACTGAGGTTCTTGAGAGTAAATATAATGTTGTATTTCTTCTTTCATAATTAACATTTTCACTAATATATTTCAGCAATTTACATGGTATGGATGTCCTTCTTTAGTATATTTACTTTTGTTAACTATATAAAATTACATATATGCCAAGTTGTTATATATTTTCAGAAAGCTTGCATTATTCAACGAGTTCAATGATAGGAGGCTAGATATATAGATTAAATTGAATGGAATTATATTTAACTATCTCTGGATGGTGCTTCATGCCTCCATGTGATGTTCATGTCATATTGCAGGTACTCATCATTGAGTTTCTTGGCAAGATCGATCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCAATAGCTCTTGTTTTACATGGACCTGTAATGCAAAAGGCCAAACTGAATTACCTTATTTTACACCAATATTTCAGGTTCGTTTCC] consensusID : consensus_1660#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2362 fasta sequence [CCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGCTGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCGCCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGAGGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGTTCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAGCCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTGTCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGCAGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGTGGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGTGGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTATGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAGGTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATAAGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCAATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAGATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTCCTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCACTGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGTTCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTGGACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCATTCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAGTAAATAGGCATTTTTTTGTTTAGCCATTAAACTTTGGAGGAACTACAGACTAAACTTGTAGATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTTTAGTATTCAGTAATCTTGATTTCAGCTTGTCAATTTGATGCGTGATTGGGTTTTCAGGGTCAGAGCAACAAGCGTGAATGCGTGATTGAGCGGATACACTACTGAGGTACTCATCATTGAGTTTCTTGGCAAGATCGATCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCAATAGCTCTTGTTTTACATGGACCTGTAATGCAAAAGGCCAAACTGAATTACCTTATTTTACACCAATATTTCAGTTTGGTGAAGAGGAATGTTTCTAGCATAGCTTGTCTTCAGTGTCTTGCTGAACTATTTGTTCCTGCATGATAGCTTGCACAGCGGCACTGTTCAAAATTGAGAGAATTTTTTTGTTCATCCCTGTTTTTATTATGATCCCAAAGATCACCACATTGTCTGACATTTGAGATGGAAGAAAGATAACATTAAGATGATCATTTTGTATGTTGTCCCAAACTGAGCACAATGGCTGATTTCAGATAGAAACATCACCTATTGTCAGTTGCCAGGCTGAAGCATTAGAAGGGACTTGTCTTATTTTTAATATTGAAGCCCAACGGGTAGATCTTGGAAGATTATTTGGGGTTTTCCAAAAAGAAGTGTTTGAAAAATATTTTGATTTTAAGATTAGAGACATGAAGCTGTCTTGATCAGAGGCAATTCTCTAGGCAGTTTGGATTAAGATGCTTTGATAACCTGCCTGCAAATCTCTAATACCGAGGCAACCTTCAGAAATTGGCTCTATCTACAAATGCCATTCCAAGATTTAAGATGCATATACATTTCTCTCCTCCAACCTTTTGAATGCCAATCCATCAGAACTTTCTAACGACAGCTATGAGCTTTGAAATAAGGGTTTTGGAATGAAGAAATGTCAACACAGAATGGATGACATTTTCTGAGAGCTAACCTTCCAATACGACGTCTAGAGCATGTTCTATAAGGACTTATTGGTGGTCTGGTGGATGGCTTTCCAGTTGTACATTACAAACTAGGTTACTGAGCGCGTGATGTATATACTTATATCGTGAGCATTAATATGATGAAAAAAT] [+] EMBL AK109858 [CCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGCTGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCGCCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGAGGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGTTCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAGCCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTGTCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGCAGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGTGGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGTGGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTATGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAGGTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATAAGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCAATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAGATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTCCTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCACTGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGTTCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTGGACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCATTCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAGTAAATAGGCATTTTTTTGTTTAGCCATTAAACTTTGGAGGAACTACAGACTAAACTTGTAGATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTTTAGTATTCAGTAATCTTGATTTCAGCTTGTCAATTTGATGCGTGATTGGGTTTTCAGGGTCAGAGCAACAAGCGTGAATGCGTGATTGAGCGGATACACTACTGAGGTACTCATCATTGAGTTTCTTGGCAAGATCGATCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCAATAGCTCTTGTTTTACATGGACCTGTAATGCAAAAGGCCAAACTGAATTACCTTATTTTACACCAATATTTCAGTTTGGTGAAGAGGAATGTTTCTAGCATAGCTTGTCTTCAGTGTCTTGCTGAACTATTTGTTCCTGCATGATAGCTTGCACAGCGGCACTGTTCAAAATTGAGAGAATTTTTTTGTTCATCCCTGTTTTTATTATGATCCCAAAGATCACCACATTGTCTGACATTTGAGATGGAAGAAAGATAACATTAAGATGATCATTTTGTATGTTGTCCCAAACTGAGCACAATGGCTGATTTCAGATAGAAACATCACCTATTGTCAGTTGCCAGGCTGAAGCATTAGAAGGGACTTGTCTTATTTTTAATATTGAAGCCCAACGGGTAGATCTTGGAAGATTATTTGGGGTTTTCCAAAAAGAAGTGTTTGAAAAATATTTTGATTTTAAGATTAGAGACATGAAGCTGTCTTGATCAGAGGCAATTCTCTAGGCAGTTTGGATTAAGATGCTTTGATAACCTGCCTGCAAATCTCTAATACCGAGGCAACCTTCAGAAATTGGCTCTATCTACAAATGCCATTCCAAGATTTAAGATGCATATACATTTCTCTCCTCCAACCTTTTGAATGCCAATCCATCAGAACTTTCTAACGACAGCTATGAGCTTTGAAATAAGGGTTTTGGAATGAAGAAATGTCAACACAGAATGGATGACATTTTCTGAGAGCTAACCTTCCAATACGACGTCTAGAGCATGTTCTATAAGGACTTATTGGTGGTCTGGTGGATGGCTTTCCAGTTGTACATTACAAACTAGGTTACTGAGCGCGTGATGTATATACTTATATCGTGAGCATTAATATGATGAAAAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1660#0 CCCGCTGCCTCACCGCATATTCGCCTCCCCCGACAGCAACAGCGACTACGGTGGCGACGG 60 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ACTCTATCGATGGCGACAACGACGCGGCGGCGGTCGCGGACGAGCGCGGCGTCGGCGGCG 120 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GTCGCGGACGAGCGTGGCGTCAGCGGCGACGGTCGCGGACGAGCGCGGCGGCGACGGCGG 180 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CGGATGCGGACGAGCGCGGCGACGGCGGCGGCGGCGGCAGCGGACGCGGATGAGGGCGGC 240 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GGTGGCGGAGGTCGCGGTCGAGGGCGGCGGCGGACCACGCACGCGGAAGGTTCCCCTTCA 300 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GATTCCATCATTGAAGAAGCAGCTAGATAAACCACAAGAACCATCGTCCACGCTGGGAGG 360 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CAAGGCATCATCAGTCAAGCAGAAGCAATAGCTAGGTTGGCGCATGCCGTAGGCTGGGTT 420 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATCGACTTCCTGCCTGAGAAGAACTTTACGAAGCAAGAGCAAGGCATGAAGTGTGTTTTT 480 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CTTTGATTCATGTGCTCTTAACAGTGTTACTTACAGATCTATCAGGCTTTCAGGAAACAT 540 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATATGCTCTTTATCCCACTAAGGTATAATATTTTCTTTTCTCTCTCCATCGATTGTGTAT 600 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATAGATTCCACTGTTGGATAGCAGTCCCACGATGCATCTGCATGATGATTCATATAATTG 660 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GCTAACCAGTGTGCAGTTTTTATCAATGTGTAATTTACTGGATACTCAATTATGCAGATG 720 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CCATGCCCAGCAATTGTATAAGAACTGTAAGACTTGATCAATGTTTTTTTTAATGTATAT 780 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GATTGGCATTGTGGTTTTCTGTAGGCTTCTGTCAGACTTGATCTGTTGAAACCAACCACA 840 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 AATGTGCTACCCTTTTTTCCGGTCATGGTGCTGCTACCATATTCATATGCAAAAGAAGAA 900 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATACTCTGTTGCTTAAATAAGGAACGCTTTCTTTTTTCATATATAAGTAGTATTCATATT 960 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CTTCTATCTCATATTACAGTTTTGCTCATATGGAAATAGAGATAGTTAGATGAATAAATT 1020 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TGAAGATCGTCATGGGCTCATTAATTCATTGTGGCCTTACTTTCAGGTTCTTACCTACCT 1080 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TTCCCTCAGGCAAGTGTGCTACAAACTTTTTGGTGACAAAAGAGAGTTTATATATGTGGT 1140 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CCGGGGCACATTTATTTTCTTTAGTGAACCAACTTTACACTGAGATTTATGCTACATGTC 1200 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TTCCTTCACAGTAGAATTATTATCGGTTTTGATGTTTTTAGTACTTATAGAATGGACATC 1260 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TCAATCAGAATGTTTCTTCCAAACTGACGAACAGAAGTTTTTTTTTTCATGGTGTTTGCT 1320 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GGACTTACAGGTCAAATGCTATTTTATTTTTTGGAAGTCGATTGACAAACCGTGCATTCA 1380 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TCTCCGCTCATCTCCAAATGATAACATAAAATCTATTACGTAATTTGTTGTTTGATAACT 1440 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TTAGAGTAGTGATAACTGGTATTTTTATTTTTCTCATGATGGGTTTATAATTTTACCTTT 1500 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GAACAGTTCTTTGACTATGTGATTGTCTGGCCTAGGTGACGTTGGTGATGAGCTGTGAGC 1560 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATACACTTCTATATCTTATTATTTTTAGTTCTAAAATTAATTATGCTGTACTATTCTTTG 1620 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TTTTCAGAAATTGAATGGTTTGTCAGATTTTTATTCAAAAATATTATATTTTCTTTTCAC 1680 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 AAATTGAACATAGAGTACCGTCTCACACGCTGCTCATCATGTTTTTTATACTTTAATGTA 1740 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 CACACGAACTATATAGTTAATGCTATTTTTCTTCTTTCATTAAGCCATACCGTTTTAATT 1800 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 ATTTATAGCTCTATGGTCCACATTGTCCTTTGTGTCCCATCATCTTAGTTTTTTCCTTTA 1860 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GACGATCAAGCAATATTTGATCTAAAATATCATAAAGCAAATCATCTCAATTGCTTATAG 1920 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TTTTCTCGATGATTATAAAATATGCAATTATATGAAGCATACAAAATCGTGTCATTTAGT 1980 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TGAAAGAACACATCTTCATCTTATATTTATTTTCTATGTTTATCATACGAAATTCCCGTA 2040 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GCAATGCGCGGGGTTTCATCTAGTATAAAAAGGAGGAGTTGCCCCCCTCCAATCCCACAT 2100 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GCTAAATCACCCGGATCAATCCCTACCGTCCATCCGTATCTGCATCGCCATGATCTACGA 2160 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 TCCCTACCGTCCAGTGTCCACCACGATTTCACCCTCTCCACCGCGCAAACACCGCGAGAA 2220 consensus_1660#1 ------------------------------------------------------------ consensus_1660#0 GACTACGCCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGC 2280 consensus_1660#1 -------CCTCCGCGCTACTCACTCCTCGCGTGTACGGCTCCGCTGCCTCACTCCACCGC 53 ***************************************************** consensus_1660#0 TGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCG 2340 consensus_1660#1 TGCCCCTGCCAGAGCCGAGTTCTTCTCCAGCCGTCGTCGCCGCACTCCACCGCTGCCCCG 113 ************************************************************ consensus_1660#0 CCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGA 2400 consensus_1660#1 CCGGAGCCGAGGTCTTCCCCAGCCGCCGCCGGAACCCGAGACCACCCTTGACGGCACAGA 173 ************************************************************ consensus_1660#0 GGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGT 2460 consensus_1660#1 GGTCGTTCCAAGCCGCCACCGCACTCCACCGCAGCCTGCCCCCACCGGCACAATGGTGGT 233 ************************************************************ consensus_1660#0 TCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAG 2520 consensus_1660#1 TCCATCTTCTGCCGGACCAGTGCCCGGGATTGCCCCCGACGGTGCCGAGGTCATTCCCAG 293 ************************************************************ consensus_1660#0 CCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTG 2580 consensus_1660#1 CCGCTGCCGCACTCTACCACAGCCTGCCCCCACCAGCCACGAGGTGTGTCCCTACCGCTG 353 ************************************************************ consensus_1660#0 TCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGC 2640 consensus_1660#1 TCAGTCTCCTTCTGCCGCAAATCACATCAGGATACCTCCGCAGCATGCCCCCGCCGGCGC 413 ************************************************************ consensus_1660#0 AGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGT 2700 consensus_1660#1 AGAGGTGGTTCCCCCTTCCGCCGGAGCCACGCCCGGGACTTCCCCCTCCGAGGCCGAGGT 473 ************************************************************ consensus_1660#0 GGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGT 2760 consensus_1660#1 GGTTCCTCCATCCACCGGAGGCTGGAGCTGCGTCTGGGCCTGCCCCTCCGGCGCCGAGGT 533 ************************************************************ consensus_1660#0 GGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTA 2820 consensus_1660#1 GGTTCCCCGCCCACCTTTGCCTCCCACCTTTTTTTGCTATTTGTTCCCGAAAGTGCGTTA 593 ************************************************************ consensus_1660#0 TGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAG 2880 consensus_1660#1 TGCAGGTACTGTAGATGCTCGATAAAATGCTTACTCGATGGAACGACGCGACGGCAGGAG 653 ************************************************************ consensus_1660#0 GTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATA 2940 consensus_1660#1 GTCACAACTAGGAGTTCAGCGGTTGTGGAGGGGCAATGATGTTGGATTTGGCAGTGCATA 713 ************************************************************ consensus_1660#0 AGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCA 3000 consensus_1660#1 AGGCCCCAGATTAGTGTCTGCTCCCATATGGTTTGTAAATTGTAATTCGGATTCCAGGCA 773 ************************************************************ consensus_1660#0 ATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAG 3060 consensus_1660#1 ATCCATTGAGTTGTGCAGCGGCATTTCACTCTTCCAGTTGCAATTGACATTGTTATCTAG 833 ************************************************************ consensus_1660#0 ATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTC 3120 consensus_1660#1 ATTTTTGAGATTTTCATAAAACTCATCCAGGTCGCTTAAGTTGTGCTGCAGGCAAGCTTC 893 ************************************************************ consensus_1660#0 CTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCAC 3180 consensus_1660#1 CTGAATCCTGAGAGAATTTTGCACATGTATTGCACTTTCAGGTTTTATAAAAATCTCCAC 953 ************************************************************ consensus_1660#0 TGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGT 3240 consensus_1660#1 TGTGCCAAAAATGTAGCACCTACCTGGGTTCATCTTTATTTCTCTCACCAATATTGCAGT 1013 ************************************************************ consensus_1660#0 TCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTG 3300 consensus_1660#1 TCAGCATGCATAGACACAATGCAGGTCCCTATTCAGCTCAAATTGACATTCTGGACATTG 1073 ************************************************************ consensus_1660#0 GACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCAT 3360 consensus_1660#1 GACCACCTCACCTCGCGCCGCGACATCACCACCGTTACTGCTACATACAAACTGCTGCAT 1133 ************************************************************ consensus_1660#0 TCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAG 3420 consensus_1660#1 TCCCCTTTCTGTTGGATTGTAGCTGGTGGGGGAACATTGATTTGTTCTTTAGAAATTCAG 1193 ************************************************************ consensus_1660#0 TAAATAGGCATTTGTAAGTGTGGC------------------------ATCCGATGGTTA 3456 consensus_1660#1 TAAATAGGCATTTTTTTGTTTAGCCATTAAACTTTGGAGGAACTACAGACTAAACTTGTA 1253 ************* * ** * ** * * ** consensus_1660#0 TATGCTATGGTCAT------TTTTCATTAAACGTTG-ACTCAACTTTGTGGTA----TGT 3505 consensus_1660#1 GATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTTTAGTATTCAGTAATCTTGA 1313 **** ** *** *** * * * ** * * * * * *** ** consensus_1660#0 TTTCAGTTT-------TGTTTAGCCATTAAACTTTGGAGG----AACTACAGAC-TAAAC 3553 consensus_1660#1 TTTCAGCTTGTCAATTTGATGCGTGATTGGGTTTTCAGGGTCAGAGCAACAAGCGTGAAT 1373 ****** ** ** * * *** *** ** * * *** * * ** consensus_1660#0 TTGTAGATGCAGAGGCCATAATAGATTTGTAAGAGGCAATGGATTT--TAGTAT--TCAG 3609 consensus_1660#1 GCGT-GATTGAGCGGATACACTACTGAGGTACTCATCATTGAGTTTCTTGGCAAGATCGA 1432 ** *** ** ** * * ** *** ** ** *** * * * ** consensus_1660#0 TAATCTTGA--TTTCAGGTAAATTAAATATCATTGCACAATCAAGAAATAT-ATTTTGTT 3666 consensus_1660#1 TCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCAATAGCTCTTGTTTTACA 1492 * ** *** *** **** * *** * **** * * * **** consensus_1660#0 AATGTTTGCAAT----------AACTTGAATGGTGGTAACCTTC-----TGTTTCAGCTT 3711 consensus_1660#1 TGGACCTGTAATGCAAAAGGCCAAACTGAATTACCTTATTTTACACCAATATTTCAGTTT 1552 ** *** ** ***** ** * * * ****** ** consensus_1660#0 GTCAATTTGATGCGTGATTGG--------GTTTTCAGGGTCAGAGCAA--CAAGCGTGAA 3761 consensus_1660#1 GGTGAAGAGGAATGTTTCTAGCATAGCTTGTCTTCAGTGTCTTGCTGAACTATTTGTTCC 1612 * * * ** * * ** ***** *** * * ** consensus_1660#0 TGCGTGAT----TGAGCGGATACACTACTGAGGTTCTTGAGAGTAAATATAATGTTG--T 3815 consensus_1660#1 TGCATGATAGCTTGCACAGCGGCACTGTTCAAAATTGAGAGAATTTTTTTGTTCATCCCT 1672 *** **** ** * * **** * * * **** * * * * * * consensus_1660#0 ATTTCTTCTTTCAT------AATTAACATTTTCACTAATATATTTCA-GCAATTTACATG 3868 consensus_1660#1 GTTTTTATTATGATCCCAAAGATCACCACATTGTCTGACATTTGAGATGGAAGAAAGATA 1732 *** * * * ** ** * ** ** ** * ** * * * ** * ** consensus_1660#0 GTATGGATGTCCTTCTTTAGTATATTTACTTTTGTTAACTATATAAAATTACATATATGC 3928 consensus_1660#1 ACATTAAGATGATCATTTTGTATGTTGTCCCAAACTGAGCACA-ATGGCTGATTTCAGAT 1791 ** * * * *** **** ** * * * * * * * * * consensus_1660#0 CAAGTTGTTATATATTTTCAGAA---AGCTTGCATTATTCAACGAG-----TTCAATGAT 3980 consensus_1660#1 AGAAACATCACCTATTGTCAGTTGCCAGGCTGAAGCATTAGAAGGGACTTGTCTTATTTT 1851 * * * **** **** ** ** * *** * * * * ** * consensus_1660#0 AGGAGGCTAGATATATAGATTAAATTGAATGGAATTATATTTAACTATCTCTGGATG-GT 4039 consensus_1660#1 TAATATTGAAGCCCAACGGGTAGATCTTGGAAGATTATTTGGGGTTTTCCAAAAAGAAGT 1911 * * * ** ** ***** * * ** * ** consensus_1660#0 GCTTCA----TGCCTCCATGTGATGTTCAT-GTCATATTGCAGG--TACTCATCATTGAG 4092 consensus_1660#1 GTTTGAAAAATATTTTGATTTTAAGATTAGAGACATGAAGCTGTCTTGATCAGAGGCAAT 1971 * ** * * * ** * * * * * * *** ** * * *** * consensus_1660#0 TTTCTTGGCAAGATCGATCATGGTGACATTTAGACTAAACCGACAGACATGGTTGTGTCA 4152 consensus_1660#1 TCTCTAGGCAGTTTGGATTAAGATGCTTTGATAACCTGCCTGCAAATCTCTAATACCGAG 2031 * *** **** * *** * * ** * ** * * * * * consensus_1660#0 ATAGCTCTT--------GTTTTACATGGACCTGTAATGCAAAAGGCCAAACTGAAT-TAC 4203 consensus_1660#1 GCAACCTTCAGAAATTGGCTCTATCTACAAATGCCATTCCAAGATTTAAGATGCATATAC 2091 * * * * * ** * * ** ** * ** ** ** ** *** consensus_1660#0 CTTATTTTACACCAATATTTCAGGTTCGTTTCC--------------------------- 4236 consensus_1660#1 ATTTCTCTCCTCCAACCTTTTGAATGCCAATCCATCAGAACTTTCTAACGACAGCTATGA 2151 ** * * * **** *** * * *** consensus_1660#0 ------------------------------------------------------------ consensus_1660#1 GCTTTGAAATAAGGGTTTTGGAATGAAGAAATGTCAACACAGAATGGATGACATTTTCTG 2211 consensus_1660#0 ------------------------------------------------------------ consensus_1660#1 AGAGCTAACCTTCCAATACGACGTCTAGAGCATGTTCTATAAGGACTTATTGGTGGTCTG 2271 consensus_1660#0 ------------------------------------------------------------ consensus_1660#1 GTGGATGGCTTTCCAGTTGTACATTACAAACTAGGTTACTGAGCGCGTGATGTATATACT 2331 consensus_1660#0 ------------------------------- consensus_1660#1 TATATCGTGAGCATTAATATGATGAAAAAAT 2362 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||