Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 16617 cluster # 16617       Sequences # 37       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16617#0 length = 1468 sequences # 27  
consensus_16617#1 length = 860 sequences # 5  
consensus_16617#2 length = 467 sequences # 2  
consensus_16617#3 length = 360 sequences # 1  
consensus_16617#4 length = 187 sequences # 1  
consensus_16617#5 length = 138 sequences # 1  

consensusID : consensus_16617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 27
consensus length = 1468
fasta sequence
                              [AGCAAAACCGTTGAAGGGAAAACGTGTTCACGAAAATACAGCCAAGATAGAAGTCGTCATAATGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG-ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG-CT-TTT-GTGTTTTGCTCTCC-TG-AATG-AAGGCTGCA-GCATCCTCC-TCAGCAGTACCTCCAATTTCTCCGATGAGAACAATACC-TTCT-GTCTGAGGATCATCAACAAACTTTTCAAGGCAATC-AAC-AAAATTCGTGCCATTGAA-GGGATCACCA-CCAATGC-CAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTG-AAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG-ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC-ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGCCCCTTTTCTCCTCTCGATTCGATTTCGTTTGGGGTTTTTGGGCGAGTGCGCTCCTCCTCCGTTTTTGTTTACTTTTTTAGGGTCTCCT]

[+] EMBL CB652937             [AGCAAAACCGTTGAAGGGAAAACGTGTTCACGAAAATACAGCCAAGATAGAAGTCGTCATAATGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG CT TTT GTGTTTTGCTCTCC TG AATG AAGGCTGCA GCATCCTCC TCAGCAGTACCTCCAATTTCTCCGATGAGAACAATACC TTCT GTCTGAGGATCATCAACAAACTTTTCAAGGCAATC AAC AAAATTCGTGCCATTGAA GGGATCACCA CCAATGC CAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTG AAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF312053             [                                                        ttttttTGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG CTNTTT GTGTTTTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AU183078             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGTATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU165677             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGANACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU076148             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU182937             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU183118             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU183836             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU101459             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU094906             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU094907             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164400             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164416             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164418             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164425             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164426             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164427             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164394             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164390             [                                                                                                      TTTTTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU164379             [                                                                                                         TTAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAG ATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU067983             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACAGGNCT TTTGGTGTTTTGCTCTCCTTGAAATGAAAGNCTGCA GCATNCTCCTTCAGCAGTACTTCCAATTTCTCCGATGAGAACAATACCTTTCTGGTCTGAGGATCATCAACAAACTTTTCAAGGCAATCAAAC AAAATTCGTGCCATTGAA GGGATCACCA CCAATGCNAAACACACGTTGACTGCCCCCA ANTACGGCTGTTGTTTGAAAACACCGCTTCATATGTCAA GTACCAGAGCGAGATACTATCCCAACACGAACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTAT CCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGA                                                                                                                                                                                                                                           ]
[-] EMBL CA756819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ctgtcCTCC T  AAAC AAGGC CCACGGATCTCCC TCAGCAGTA CTCTAATTTTTCNGATGAGCACAAT CC TTNT GTTTGAGGATCATCAACAACTTTTTCAAGGCAATC AACAAAAATTTG GCCA TGAAGGGGATCCCCACCCAATGC CAACACACGTTGACTGCCCCAAGCATACGGCTGTTGTTTG AACCCCCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGCCCCTTTTCTCCTCTCGAT                                                                      ]
[-] EMBL CB625640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATACC TTCT GTCTGAGGATCATCAACAAACTTTTCAAGGCAATC AAC AAAATTCGTGCCATTGAA GGGATCACCA CCAATGC CAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTG AAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGCCCCTTTTCTCCTCTCGAGTCGATT                                                                ]
[-] EMBL CB617833             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCAATGC CAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTG AAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCGTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGCCCCTTTTCTCCTCTCGATTCGATT                                                                ]
[-] EMBL CB652936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGTTGACTGCCCCAAGCTTACGGCTGTTGTTTG AAACACCGTTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACG ACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGCCCCTTTTCTCCTCTCGATTCGATTTCGTTTGGGGTTTTTGGGCGAGTGCGCTCCTCCTCCGTTTTTGTTTACTTTTTTAGGGTCTCCT]
[-] EMBL CB639690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGATACTATCCCAACACG ACNTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTC ACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGATAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAAGCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGCGGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCG                                                                                                ]
[-] EMBL AU070550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              nCATGATTCCAAATTTACATTCAACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCACTTTCACCATGTCATGCTGAGGTAT CCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTA GGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGCGGGTGCTCTTGTCCACGAACACC                                                                                                                                                                                                                                                   ]


>consensus_16617#0 AGCAAAACCGTTGAAGGGAAAACGTGTTCACGAAAATACAGCCAAGATAGAAGTCGTCAT AATGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTTTTAACAAAATATCAT GTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCAT CTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCC GCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAG TTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTT GAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGC CTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCC AGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG CTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAAT TTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATC AACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAA GCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTAT CCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGG CTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGC AGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTC AAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATAT AACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAG GCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTA CTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCAC GCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAA GCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGC GGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGC CCCTTTTCTCCTCTCGATTCGATTTCGTTTGGGGTTTTTGGGCGAGTGCGCTCCTCCTCC GTTTTTGTTTACTTTTTTAGGGTCTCCT



consensusID : consensus_16617#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 860
fasta sequence
                              [TCTTTTTTTTTTTTTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAAT-CCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGGCTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAATTTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATCAACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCTTTCTACTCCTTCA]

[+] EMBL CB625641             [TCTTTTTTTTTTTTTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAAT CCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGGCTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAATTTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATCAACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACC                                              ]
[-] EMBL CF312052             [                                           CCAAACAAAATATCATGTCGATAACTCGAGAAT CCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGGCTTTTGTGTTTTGCTCT                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL C74634               [                                                       TCCTGTCGATAACTCGAGAATCCCTGTCNTACTGAAAAGAGACAANTGAGCCTCNGNTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAANGGAAGANNTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL OSC31581             [                                                                                                                                                                                                                                                                                                            GAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCCTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATNCAACAACAGGCTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAATTTCTCCGATGAGAACA                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF308371             [                                                                                                                                                                                                                                                                                                                                                                                    CTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCAGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGGCTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAATTTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATCAACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAAGCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATCCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGGCTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCAGCCTTCTTTCTACTCCTTCA]


>consensus_16617#1 TCTTTTTTTTTTTTTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATG TCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATC TTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCG CGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGT TTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTG AAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGCC TCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCCA GCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGGC TTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAATT TCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATCA ACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAAG CCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTATC CCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGGC TTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGCA GCCTTCTTTCTACTCCTTCA



consensusID : consensus_16617#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 467
fasta sequence
                              [TTTTTTTAAAAACCCCCCTCNNATTCAAGGANCCNANCGANANNNTNCCCAAACNACCTGCCTTGTGGATTAACCCGGCATTATCCAATTTTAAAATTACCCGGCTTAATGAATACCAGGCCAATTGGTCCAAACAACCGAGTTTTTGATTGCTTGTTAAGAGCAGCCTTCACTTTCACCATGTCCATGCTGAGGTAATCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGC]

[-] EMBL OS475                [TTTTTTTAAAAACCCCCCTCNNATTCAAGGANCCNANCGANANNNTNCCCAAACNACCTGCCTTGTGGATTAACCCGGCATTATCCAATTTTAAAATTACCCGGCTTAATGAATACCAGGCCAATTGGTCCAAACAACCGAGTTTTTGATTGCTTGTTAAGAGCAGCCTTCACTTTCACCATGTCCATGCTGAGGTAATCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGC]
[-] EMBL D42901               [                                                       ACCTGCCTTGTGGATTAACCCGGCATTATCCAATTTTAAAATTACCCGGCTTAATGAATACCAGGCCAATTGGTCCAAACAACCGAGTTTTTGATTGCTTGTTAAGAGCAGCCTTCACTTTCACCATGTCCATGCTGAGGTAATCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGC]


>consensus_16617#2 TTTTTTTAAAAACCCCCCTCNNATTCAAGGANCCNANCGANANNNTNCCCAAACNACCTG CCTTGTGGATTAACCCGGCATTATCCAATTTTAAAATTACCCGGCTTAATGAATACCAGG CCAATTGGTCCAAACAACCGAGTTTTTGATTGCTTGTTAAGAGCAGCCTTCACTTTCACC ATGTCCATGCTGAGGTAATCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCAT CGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGC CTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGT TCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTC GGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGC



consensusID : consensus_16617#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence
                              [TTTTTTTTTTTTTTGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACA]

[-] EMBL AU067982             [TTTTTTTTTTTTTTGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACA]


>consensus_16617#3 TTTTTTTTTTTTTTGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAA CAAAATATCATGTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTC AGGTAGGCCATCTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATT TGAGTAGTTCCGCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGA GCACCAAAAAGTTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATT CCGCGTTGCTTGAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACA



consensusID : consensus_16617#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence
                              [TANANGGAAGNTTTGAGTAGATCCGCGGCCAGCAATGCGGCTCTACANAGGAATTGCTCGCTGTTGCCCACGAGCACCANTGAAGTTTNCCAATGTATCTCTACTGTNCCATNTGCTCTCCCTANTCTANNATNATCNCGTTGCTTGAAAATNTCGAACANAGTTGAACCAANCNTCGCTGGTGACT]

[-] EMBL OSC30061             [TANANGGAAGNTTTGAGTAGATCCGCGGCCAGCAATGCGGCTCTACANAGGAATTGCTCGCTGTTGCCCACGAGCACCANTGAAGTTTNCCAATGTATCTCTACTGTNCCATNTGCTCTCCCTANTCTANNATNATCNCGTTGCTTGAAAATNTCGAACANAGTTGAACCAANCNTCGCTGGTGACT]


>consensus_16617#4 TANANGGAAGNTTTGAGTAGATCCGCGGCCAGCAATGCGGCTCTACANAGGAATTGCTCG CTGTTGCCCACGAGCACCANTGAAGTTTNCCAATGTATCTCTACTGTNCCATNTGCTCTC CCTANTCTANNATNATCNCGTTGCTTGAAAATNTCGAACANAGTTGAACCAANCNTCGCT GGTGACT



consensusID : consensus_16617#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 138
fasta sequence
                              [ATATCATGTCGNTAACTCGAGAATCCTGTNTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGNTAAGCAAGGAAAGGNTNGGGTAAAAGGAAGTTTTGTGTAGTTCCGNGGCCAGCAATG]

[+] EMBL AA750293             [ATATCATGTCGNTAACTCGAGAATCCTGTNTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCATCTTCACACCGAAGNTAAGCAAGGAAAGGNTNGGGTAAAAGGAAGTTTTGTGTAGTTCCGNGGCCAGCAATG]


>consensus_16617#5 ATATCATGTCGNTAACTCGAGAATCCTGTNTTATTGAAAAGAGACAAGTGAGCCTCAGGT AGGCCATCTTCACACCGAAGNTAAGCAAGGAAAGGNTNGGGTAAAAGGAAGTTTTGTGTA GTTCCGNGGCCAGCAATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16617#3      -------------------------------------------------TTTTTTTTTTT 11
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AGCAAAACCGTTGAAGGGAAAACGTGTTCACGAAAATACAGCCAAGATAGAAGTCGTCAT 60
consensus_16617#2      --------------------------------------------------------TTTT 4
                                                                                   

consensus_16617#3      TTTGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCAT 71
consensus_16617#5      -----------------------------------------------------ATATCAT 7
consensus_16617#1      -TCTTTTTTTTTTTTTAGAAACATCTTAGGTTTCTGCGCCATTTCCAAACAAAATATCAT 59
consensus_16617#4      --TANANGGAAGNTTTGAGTAGATCCGCGGCCAGCAATGCGGCTCTACANAGGAATTGCT 58
consensus_16617#0      AATGAAAAAAAAAACTAGAAACATCTTAGGTTTCTGCGCCATTTTTTAACAAAATATCAT 120
consensus_16617#2      TTTAAAAACCCCCCTCNNATTCAAGGANCCNANCGANANNNTNCCCAAACNACCTGCCTT 64
                                                                                  *

consensus_16617#3      GTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCAT 131
consensus_16617#5      GTCGNTAACTCGAGAATCCTGTNTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCAT 67
consensus_16617#1      GTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCAT 119
consensus_16617#4      CGCTGTTGCCCACGA-----GCACCANTGAAGTTTNCCAA-TGTATCTCTACTGTNCCAT 112
consensus_16617#0      GTCGATAACTCGAGAATCCTGTCTTATTGAAAAGAGACAAGTGAGCCTCAGGTAGGCCAT 180
consensus_16617#2      GTGGATTAACCCGGCATTATCCAATTTTAAAATTACCCGGCTTAATGAATACCAGGCCAA 124
                            *    *  *             * **      *   *              *** 

consensus_16617#3      CTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCC 191
consensus_16617#5      CTTCACACCGAAGNTAAGCAAG--GAAAGGNTNGGGTAAAAGGAAGTTTTGTGTAGTTCC 125
consensus_16617#1      CTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCC 179
consensus_16617#4      NTGCTCTCCCTANTCTANNATN-------ATCNCGTTGCTTGAAAATNTCGAACANAGTT 165
consensus_16617#0      CTTCACACCGAAGATAAGCAAGAGGAAAGGCTAGGGTAAAAGGAAGATTTGAGTAGTTCC 240
consensus_16617#2      TTGGTCCAAACAACCGAGTTTTT---GATTGCTTGTTAAGAGCAGCCTTCACTTTCACCA 181
                        *   *     *    *                 * *    * *    *           

consensus_16617#3      GCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAG 251
consensus_16617#5      GNGGCCAGCAATG----------------------------------------------- 138
consensus_16617#1      GCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAG 239
consensus_16617#4      GAACCAANCNTCGCTGGTGACT-------------------------------------- 187
consensus_16617#0      GCGGCCAGCAATGCGGCTCTACAAAGGAATTGCTCGCTGTTGCCCACGAGCACCAAAAAG 300
consensus_16617#2      TGTCCATGCTGAGGTAATCCTTCGGTAATGCAGACAACAAGGTCAAGTTCGGCCTCCATC 241
                           *   *   *                                               

consensus_16617#3      TTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTT 311
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      TTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTT 299
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      TTTTCCAATGTTTCTCTACTGTACCATTTGCTCTCCCTATTCTAACATTCCGCGTTGCTT 360
consensus_16617#2      GCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATATAACAGATGCATTCGCC 301
                                                                                   

consensus_16617#3      GAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACA----------- 360
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      GAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGC 359
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GAAAATTTCGAACATAGTTGAACCAATCTTCGCTGGTGACTCAACAACAGTAACCCCAGC 420
consensus_16617#2      TTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAGGCCTAGGTGCTCGGTT 361
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      CTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCC 419
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CTCTCTGAGAGCCTTGATTTTGTCTTGTGCCGTACCCTTGCCCCCTGACACAATTGCTCC 480
consensus_16617#2      CCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTACTCGATGGCCTGCTCG 421
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      AGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG 479
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AGCATGACCCATGCGACGCCCAGGTGGAGCAGTGAGTCCAGCTATGAATGCAACAACAGG 540
consensus_16617#2      GTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCACGC-------------- 467
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      CTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAAT 539
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CTTTTGTGTTTTGCTCTCCTGAATGAAGGCTGCAGCATCCTCCTCAGCAGTACCTCCAAT 600
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      TTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATC 599
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      TTCTCCGATGAGAACAATACCTTCTGTCTGAGGATCATCAACAAACTTTTCAAGGCAATC 660
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      AACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAA 659
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AACAAAATTCGTGCCATTGAAGGGATCACCACCAATGCCAACACACGTTGACTGCCCCAA 720
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      GCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTAT 719
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GCCTACGGCTGTTGTTTGAAACACCGCTTCATATGTCAAGGTACCAGAGCGAGATACTAT 780
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      CCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGG 779
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CCCAACACGACCTGGCTTGTGGATGTAACCTGGCATGATTCCAATTTTACATTCACCCGG 840
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      CTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGC 839
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CTTAATGATACCAGGGCAATTTGGTCCAATCAACCGAGTTTTTGATTGCTTGTTCAGAGC 900
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      AGCCTTCTTTCTACTCCTTCA--------------------------------------- 860
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AGCCTTCACTTTCACCATGTCATGCTGAGGTATCCCTTCGGTAATGCAGACAACAAGGTC 960
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AAGTTCGGCCTCCATCGCTTCCATTATTGCAGCAGCAGCAAATGGTGGTGGAACATATAT 1020
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      AACAGATGCATTCGCCTTTGTCTCAGCCTTAGCTTCTGCCACAGAGTTGAACACCGGAAG 1080
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GCCTAGGTGCTCGGTTCCACCTTTCTTAGGGGTAACCCCACCTACCATGGTGGTGCCGTA 1140
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CTCGATGGCCTGCTCGGTGTGGAAGGTGCCGTTCTTCCCGGTGATGCCCTGGCAGATCAC 1200
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GCGGGTGCTCTTGTCCACGAACACCGCCGGCGACGGCGCGGCCGCGGCCGCCGCCGCGAA 1260
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GCCCCGCGCGTGGAGGAGGCGGGAGGCCGCGGATCCCAGCAGCTGGGACGCGCGGCGGGC 1320
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      GGAGGCGGCCATGGTGGGTGGCTGGTGGTGGCAGCGGCGGGCGGCGGCGGCGGCGCGTGC 1380
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ------------------------------------------------------------
consensus_16617#5      ------------------------------------------------------------
consensus_16617#1      ------------------------------------------------------------
consensus_16617#4      ------------------------------------------------------------
consensus_16617#0      CCCTTTTCTCCTCTCGATTCGATTTCGTTTGGGGTTTTTGGGCGAGTGCGCTCCTCCTCC 1440
consensus_16617#2      ------------------------------------------------------------
                                                                                   

consensus_16617#3      ----------------------------
consensus_16617#5      ----------------------------
consensus_16617#1      ----------------------------
consensus_16617#4      ----------------------------
consensus_16617#0      GTTTTTGTTTACTTTTTTAGGGTCTCCT 1468
consensus_16617#2      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)