These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16620#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 1458 fasta sequence [TCGAGTTTTTTTTTTTTTTTTTTGTAGAGATAACTAGTAATTTCTTTA-TTC-AAGAGA-GCGAT-ATACATCGAACAGTTTATTCATTCTAA-TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC-TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC-AACGTTTATGCAGATCTCC-GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT-GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC-TGGAGGAGACCATC-AGGAC-TCACTTTCAAAATCCCTCCTTCTGAATTTAAC-T-TGAACCCATTG-TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA-GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA-GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC-CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGCGAACCCGGCGGTGGCCGAGGCGGATATAGCCTAGCCTACTACCACTACTACTAGGTTGGATGCTGCACCACGACAAGCAAGCGAGGCGAGGCGGTGACGGTGACGTGGCGAGCTGATCAGCTGAAGGGGAGGAG] [+] EMBL CF325093 [TCGAGTTTTTTTTTTTTTTTTTTGTAGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGA ] [+] EMBL CF323516 [ TTTTTTTTTTTTTTTTGTAGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTC AAATCCCTCCTTCTGAATTTAA ] [+] EMBL CB671886 [ tccTTTTTTTTTTTTTTTTGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGGTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GGGGGGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGGGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAAT ] [+] EMBL CB661603 [ tcTTTTTTTTTTAGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGG ] [-] EMBL BI812965 [ TTTTTTTTTTAGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAAGTGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTGGTCCGCATTCCCTACCTCAAAACCATCGCGCCTGGTGGTGTTCGTTGACCTCATCATTGGGCAAATCTTTGAACTGGGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATCGAGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC TGTGAACCCATGGTTGCTCCACAAATTTGTGGAACTTA TGATACTTCTA ] [+] EMBL CF309180 [ TTTTTTGTAGAGATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGCAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGT ] [-] EMBL BM421726 [ TTTTTGTAGAGATAACTAGTAATTTCTTNAGTTCAAAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGGATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCCGGTGTAAGCTGATCATTTGATGTGCTCTCAAATA TTTGTCCG ATTCCCTACCTCAAAAACATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGG AAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAG AAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGCTTGGAGGAGA CATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG T CTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTG ] [+] EMBL CB651990 [ ccGAGATAACTAGTAATTTCTTTA TTC AAGAGACGCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCT ] [+] EMBL CF313458 [ GATAACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTTCTTTTTAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTTTTTTTTTGTTGTGCTCTCAAATATTTTGACC ] [+] EMBL CB663654 [ ACTAGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGAGGGACTC ACTCATCCACAAGTAGTTCTGAAATG ] [+] EMBL CB678081 [ TAGTAATTTCTTTA TTC CAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTC ] [+] EMBL CB651962 [ acgTAGTAATTTCTTTA TTC AAGAGA TCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GGGGTGTTCGGTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAAGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGGTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCGAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGGGGTATGATTTAATGCATAGCCATTAACAAGAGTGCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTT ] [-] EMBL AK102352 [ AGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGCGAACCCGGCGGTGGCCGAGGCGGATATAGCCTAGCCTAC ] [-] EMBL CB684349 [ AGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGG ] [+] EMBL CB657032 [ AGTAATTTCTTTA TTC AAGAGA GCGAT ATACATCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCT ] [+] EMBL CB651961 [ C AAGAGA CTTTAAGAGGTCGAACAGTTTATTCATTCTAA TGTTTTAATTTACCCAGGTAGATACAGTTATCACAGAGAACCCTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGAT ] [-] EMBL CF313457 [ AGTTATCACAGAGAACACTCCTTTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTCAAACG TTAT CAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCNTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTG ] [+] EMBL CB678597 [ ATCACAGAGAACACTCC TTCAATACGCTTCCAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGGTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGGAAACAACGCTGAATCAGCTACAGGTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAA ] [-] EMBL CF306573 [ CAAGAGGCATGACTCGCTTCCAGAATAGTTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTG ] [-] EMBL AA752231 [ TTGAGACTTC AACGTTTATGCAGATCTCC GTGTAAGCTGATCATTTGATGTGCTCTCAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAAC ] [-] EMBL AA752246 [ CAAATATTTTGTCCGCATTCCCTACCTCAAAACCATCGCGCCT GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGACTTCACTTTCAAAAT ] [-] EMBL CF309179 [ GTGGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAAC T TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAAC ] [+] EMBL CA305847 [ acccACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAATGGATTCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGC TGGAGGAGACCATC AGGAC TCACTTTCAAAATCCCTCCTTCTGAATTTAACNT TGAACCCATTG TCCTCCACAAATTTGTTGAACTTATTGATACTTCTAATATCTGATATCAAGCAATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCA ] [-] EMBL CB663653 [ CAAGCGATGAGTGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGC ] [-] EMBL CB671885 [ TATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGCGAACCCGGCGGAGGCCGAGGC ] [-] EMBL CA999010 [ GCATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCT ] [-] EMBL CB678596 [ AAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGC ] [-] EMBL CF324604 [ GCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATAGGTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCG ] [-] EMBL CB657031 [ TTTATTTCC TTACCAGAAGTTCTAATGTATTTTTGAATGATGTCCTGGCTCTGA GGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCC CATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGCGAACCCGGCGGTGGCCGAGGCGGATATAGCCTAGCCTACTACCACTACTACTAGGTTGGATGCTGCACCACGACAAGCAAGCGAGGCGAGGCGGTGACGGTGACGTGGCGAGCTGATCAGCTGAAGGGGAGGAG] [-] EMBL AA750635 [ CAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAGTAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAAAATGAT ] [-] EMBL CB678080 [ CATCCGCAAGTAGTTCTGAAATGAATATCTTTGGCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTGTTCACGAGGGACATAACCAAAGTCAGTAAAGAATTCAGCAAGTGATTTTATACCATACCCATCAACTCCAAATGTTGTGAAAGCAAAATGATCATAGCAAATGTGGTCCCGCATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATGAATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCATGGCGATGCCGCGGCGGCGCCGGGTGCATGGGGTTCCGATTCCGCCCAGACGTACGGGCGCCGCGGCGGCGGGGGAGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCGCGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACAAGGGGC ] consensusID : consensus_16620#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 690 fasta sequence [CCAGCCGATCGCAAAAGATGTATCAATGAACTATGCACCCTAATTCAAACAGTGGAACAACTTCTATTTGCATCATCGACGACTGCAGAACCAATATTGACACCTTGGCCTCTGATGCGAGCACTCGATGATATGGAAAATGCCAACGCACAAGTTGAAGTTTCTGTGGAAGAAGTAACGAAGGCTCGCACCCAAAAGATAAAGATCTTTGAGAATCGCGCTCATGAAGTTGGGAGGGAGAGGCAAGTGTTCGTCGATTTCTTCAGCAACCCCGAGCGACTCAAGAATCAAGTCAGAGAGCTTACCTCCCGTGTGAAAGCTCTCCAGGAATAAATAGATAGATAGATATCCCTCGTCTAGTTTGCATTTGTGTGCCAGGTCGTCCCGCGAAATGGGAAGCAACAGCCAAGCTCGCAATGATGCTGTTGCTTGCAAAGTTTCCCTTCCTCC-ATGCGAAGTTTGGGGGAACCATCGGTTAGAGCACAGCTGTTGTTATATCTTTCGGGGATAGCAGTCGTGCTTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGATAGATGGTGGTTGTACATTTGTGTACTGGTGTTGGAGAGTCGAAACTAGCATTGCTTAGTGTGTATATTAGATTGATCTTCAATTATTTGAACACTAGTAATATTTGTTGCTAAAAAAA] [+] EMBL CF323570 [CCAGCCGATCGCAAAAGATGTATCAATGAACTATGCACCCTAATTCAAACAGTGGAACAACTTCTATTTGCATCATCGACGACTGCAGAACCAATATTGACACCTTGGCCTCTGATGCGAGCACTCGATGATATGGAAAATGCCAACGCACAAGTTGAAGTTTCTGTGGAAGAAGTAACGAAGGCTCGCACCCAAAAGATAAAGATCTTTGAGAATCGCGCTCATGAAGTTGGGAGGGAGAGGCAAGTGTTCGTCGATTTCTTCAGCAACCCCGAGCGACTCAAGAATCAAGTCAGAGAGCTTACCTCCCGTGTGAAAGCTCTCCAGGAATAAATAGATAGATAGATATCCCTCGTCTAGTTTGCATTTGTGTGCCAGGTCGTCCCGCGAAATGGGAAGCAACAGCCAAGCTCGCAATGATGCTGTTGCTTGCAAAGTTTCCCTTCCTCC ATGCGAAGTTTGGGGGAACCA ] [+] EMBL BQ905929 [ gAAGCTCGAAAT ATGCTGTTGCTTGTAAAGTTTCCCTTCCTCCAATGCGAAGTTTGGGGGAACCATCGGTTAGAGCACAGCTGTTGTTATATCTTTCGGGGATAGCAGTCGTGCTTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGATAGATGGTGGTTGTACATTTGTGTACTGGTGTTGGAGAGTCGAAACTAGCATTGCTTAGTGTGTATATTAGATTGATCTTCAATTATTTGAACACTAGTAATATTTGTTGCTAAAAAAA] consensusID : consensus_16620#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 540 fasta sequence [AAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCCCATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCCCTCGTGCCGGAAATGGGAAGCAACAGCCAAGCTCGCAATGATGCTGTTGCTTGCAAAGTTTCCCTTCCTCCAATGCGAAGTTTGGGGGAACCATCGGTTAGTTTGTTGGATGTTGAGGTGCACAGCTGCTGTTGTTATATTTTGGGGATGCAGTCGTGATTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGCTAGATGGTGGTTGTACATTTGTGTACTGGTGTTGGGAGACTCGAAAACTAGCATTGCTTAGTGTGTATATTAGATTGATCTTCAATTATTTGAACACTGCTAATGAGCCCTATATTAGATTGATCTTCAATTAAAAAAAAAAAAAAAAAAAAAAAAACTC] [-] EMBL CF323925 [AAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTCTGAAAGCAAAATGATCATAGCAAATGTGGTCCCCATCATAAGAACGAACAAGTTCCAGGATGGTTTTGGCAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCCCTCGTGCCGGAAATGGGAAGCAACAGCCAAGCTCGCAATGATGCTGTTGCTTGCAAAGTTTCCCTTCCTCCAATGCGAAGTTTGGGGGAACCATCGGTTAGTTTGTTGGATGTTGAGGTGCACAGCTGCTGTTGTTATATTTTGGGGATGCAGTCGTGATTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGCTAGATGGTGGTTGTACATTTGTGTACTGGTGTTGGGAGACTCGAAAACTAGCATTGCTTAGTGTGTATATTAGATTGATCTTCAATTATTTGAACACTGCTAATGAGCCCTATATTAGATTGATCTTCAATTAAAAAAAAAAAAAAAAAAAAAAAAACTC] consensusID : consensus_16620#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence [TTTTTTTTTTAACTAGTAGNTGGCTTTATTCAAGAGAGCGATATACATCGAACAGTTTATTCATTCTAAGGTTTTAATTTACCCAGGTAGATACAGGTTATCACAGAGAACACTCCTTCAATACGCTTCCAAGGAGGCATGACTCGCTTCCAGAATAGTTGAGACTGTCAACGGTGTTATGCAGATCTCCGGGGTAAGCGTGATCATTGTGAGTGGTGCTCTCAAAATATTTGGGTCCGCATTCCCTACCTCAAAACCATCGGCGCCGTGGTGGGTGTTCGTTGACCTCATCATTGGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAAGTGGATTCAGGGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTGCTGGAGGAGACCATCAGGACTCACTTTCAAAATCCCTCCTTCTGAATTTAACTTGAACCCATGGTCCTCCACAAATTGGTTGAACTTATNGANTACTTCTAATATCGTGATATCAAG] [-] EMBL BM419051 [TTTTTTTTTTAACTAGTAGNTGGCTTTATTCAAGAGAGCGATATACATCGAACAGTTTATTCATTCTAAGGTTTTAATTTACCCAGGTAGATACAGGTTATCACAGAGAACACTCCTTCAATACGCTTCCAAGGAGGCATGACTCGCTTCCAGAATAGTTGAGACTGTCAACGGTGTTATGCAGATCTCCGGGGTAAGCGTGATCATTGTGAGTGGTGCTCTCAAAATATTTGGGTCCGCATTCCCTACCTCAAAACCATCGGCGCCGTGGTGGGTGTTCGTTGACCTCATCATTGGGCAAATCTTTGAACTGTGGGAGTACCAGGCGTTCAGCAAATTCAATATAGGAACGTGGAAGTGGATTCAGGGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTGCTGGAGGAGACCATCAGGACTCACTTTCAAAATCCCTCCTTCTGAATTTAACTTGAACCCATGGTCCTCCACAAATTGGTTGAACTTATNGANTACTTCTAATATCGTGATATCAAG] consensusID : consensus_16620#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 389 fasta sequence [AAAGTGWACKKAASCTGHYATCDBCTACACGTTMAGCTTTGCTCGYGGGGAGCCCTCAGGGKTCACTTTCAAAAAWCCCRCCCTTCTGAATTTAACCTTGAACCCATTGTCCTCCAKAAAATTTGTTGAACCTAATTGAAACCTCTAATATCTGAWWTCAAGCAATGAGTGGAAATTGTGGTATGATTTAGTGSATAGCCATTAACAAGAGTCCATGCAGSATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTGAATGATGTCCTGGCTCTGAGGACTCAACTCATCCACAAGTAGT] [-] EMBL AA752669 [AAAGTGWACKKAASCTGHYATCDBCTACACGTTMAGCTTTGCTCGYGGGGAGCCCTCAGGGKTCACTTTCAAAAAWCCCRCCCTTCTGAATTTAACCTTGAACCCATTGTCCTCCAKAAAATTTGTTGAACCTAATTGAAACCTCTAATATCTGAWWTCAAGCAATGAGTGGAAATTGTGGTATGATTTAGTGSATAGCCATTAACAAGAGTCCATGCAGSATATTCACTTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTGAATGATGTCCTGGCTCTGAGGACTCAACTCATCCACAAGTAGT] consensusID : consensus_16620#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence [AGCATACATGTTATCACGAGAGAACACTCCTTCAATACGCTTCCAAGAGGCATGACTCGCTGTCCAGAATAGTGGAGACTTCAGCGTTTATGCGAGATCTCCGGTGTAAGCTGATCATTTGATGTGCTCTCAAGATATTTTGTCCGCATTCCCTAGCTCAAAACATCGCGCCGTGTGGTGTCGTGACTCATCATTGGGAAATCTTTGAACTGTGGGAGTAACCAGGCGTTCAGCAAATTTCGAATATAGGAAGGTGGAATGGA] [-] EMBL BI809278 [AGCATACATGTTATCACGAGAGAACACTCCTTCAATACGCTTCCAAGAGGCATGACTCGCTGTCCAGAATAGTGGAGACTTCAGCGTTTATGCGAGATCTCCGGTGTAAGCTGATCATTTGATGTGCTCTCAAGATATTTTGTCCGCATTCCCTAGCTCAAAACATCGCGCCGTGTGGTGTCGTGACTCATCATTGGGAAATCTTTGAACTGTGGGAGTAACCAGGCGTTCAGCAAATTTCGAATATAGGAAGGTGGAATGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 ------------------------------------------------------------ consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 CCAGCCGATCGCAAAAGATGTATCAATGAACTATGCACCCTAATTCAAACAGTGGAACAA 60 consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 ------------------------------------------------------------ consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 CTTCTATTTGCATCATCGACGACTGCAGAACCAATATTGACACCTTGGCCTCTGATGCGA 120 consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 ------------------------------------------------------------ consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 GCACTCGATGATATGGAAAATGCCAACGCACAAGTTGAAGTTTCTGTGGAAGAAGTAACG 180 consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 --------------------------TTTTTTTTTTAACTAGTAGNTGGCTTTATTCAAG 34 consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 -----TCGAGTTTTTTTTTTTTTTTTTTGTAGAGATAACTAGTAATTT-CTTTATTCAAG 54 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 AAGGCTCGCACCCAAAAGATAAAGATCTTTGAGAATCGCGCTCATGAAGTTGGGAGGGAG 240 consensus_16620#2 ---------------------AAAAAATTCAGCAAGTGATTTTATACCATAACCATCAAC 39 consensus_16620#3 AGAGCGATATACATCGAACAGTTTATTCATT--CTAAGGTTTTAATTTACCCAGGTAGAT 92 consensus_16620#5 -------------------------------------------------------AGCAT 5 consensus_16620#0 AGAGCGATATACATCGAACAGTTTATTCATT--CTAATGTTTTAATTTACCCAGGTAGAT 112 consensus_16620#4 --------------------------AAAGT--GWACKKAASCTGHYATCDBCTACACGT 32 consensus_16620#1 AGGCAAGTGTTCGTCGATTTCTTCAGCAACCCCGAGCGACTCAAGAATCAAGTCAGAGAG 300 consensus_16620#2 TC-CAAATGTCTGAAAGCAAAATGATCA-----TAGCAAATGTGGTCCCCATCATAAGAA 93 consensus_16620#3 ACAGGTTATCAC-AGAGAACACTCCTTCAATACGCTTCCAAGGAGGCATGACTCGCT--- 148 consensus_16620#5 ACATGTTATCACGAGAGAACACTCCTTCAATACGCTTCCAAG-AGGCATGACTCGCTG-- 62 consensus_16620#0 ACA-GTTATCAC-AGAGAACACTCCTTCAATACGCTTCCAAG-AGGCATGACTCGCT--- 166 consensus_16620#4 TMAGCTTTGCTCGYGGGGA-GCCCTCAGGGKTCACTTTCAAA-AAWCCCRCCCTTCTGAA 90 consensus_16620#1 CTTACCTCCCGTGTGAAAGCTCTCCAGGAATAAATAGATAGATAGATATCCCTCGTCTAG 360 consensus_16620#2 CGAACAAGTTCCAGGATGGTTTTGGCAGT-TGGATTTCTGCTCAGATATACTTTCTCCAT 152 * * consensus_16620#3 TCCAGAATAGTTGAGACTGTCAACGGTGT--TATGCAGATCTCCGGGGTAAGCGTGATCA 206 consensus_16620#5 TCCAGAATAGTGGAGACT-TCAGCGTTTA--TGCG-AGATCTCCGGTGTAAGC-TGATCA 117 consensus_16620#0 TCCAGAATAGTTGAGACT-TCAACGTT----TATGCAGATCTCCG-TGTAAGC-TGATCA 219 consensus_16620#4 TTTAACCTTGAACCCATTGTCCTCCAKAAAATTTGTTGAACCTAATTGAAACCTCTAATA 150 consensus_16620#1 TTTGCATTTGTGTGCCAGGTCGTCCCGCGAAATGGGAAGCAACAGCCAAGCTCGCAATGA 420 consensus_16620#2 GTTTGAGATAACTGTCCCCTCGTGCCG-GAAATGGGAAGCAACAGCCAAGCTCGCAATGA 211 ** * * * * consensus_16620#3 TTGTGAGTGGTGCTCTCAAAATATTTGGGTCCGCATTCCCTACCT---CAAAACCATCGG 263 consensus_16620#5 TT-TGA--TGTGCTCTCAAGATATTTTG-TCCGCATTCCCTAGCT---CAAAAC-ATCG- 168 consensus_16620#0 TT-TGA--TGTGCTCTCAA-ATATTTTG-TCCGCATTCCCTACCT---CAAAACCATCG- 270 consensus_16620#4 TCTGAWWTCAAGCAATGAGTGGAAATTG--TGGTATGATTTAGTG---SATAGCCATTAA 205 consensus_16620#1 TGCTGT----TGCTTGCAAAGTTTCCCTTCCTCCA-TGCGAAGTTTGGGGGAACCATCGG 475 consensus_16620#2 TGCTGT----TGCTTGCAAAGTTTCCCTTCCTCCAATGCGAAGTTTGGGGGAACCATCGG 267 * ** * * * * * ** consensus_16620#3 CG-------------CCGTGGTGGGTGTTCGTTGACCTCATCATTGGGCAAATCTTTGAA 310 consensus_16620#5 CG-------------CCGTGT--GGTGTC--GTGAC-TCATCATTGGG-AAATCTTTGAA 209 consensus_16620#0 CG-------------CC-TGT--GGTGTTCGTTGACCTCATCATTTGGCAAATCTTTGAA 314 consensus_16620#4 CAAGAGT--------CCATGCAGSATATT------CACTTTCCCTAGATAAAACTTGGAA 251 consensus_16620#1 TTAGA-----------------GCACAGCTGTTGTTAT-ATCTTTCGGGGATAGCAGTCG 517 consensus_16620#2 TTAGTTTGTTGGATGTTGAGGTGCACAGCTGCTGTTGTTATATTTTGGGGAT-GCAGTCG 326 * * * * consensus_16620#3 CTGTGGGAGTA-CCAGGCGTTCAGCA----AATTC--AATATAGGAACGTGGAAGTGGAT 363 consensus_16620#5 CTGTGGGAGTAACCAGGCGTTCAGCA----AATTTCGAATATAGGAAGGTGGAA-TGGA- 263 consensus_16620#0 CTGTGGGAGTA-CCAGGCGTTCAGCA----AATTC--AATATAGGAACGTGGAA-TGGAT 366 consensus_16620#4 --ATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTGATGTACTTGCAAGAGTTGCA 309 consensus_16620#1 TGCTTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGA-TAGAT 576 consensus_16620#2 TGATTGTTGTAAAGTAACCACGAGCCCGTTTCGTCGTCTGATTGATATTCAGGC-TAGAT 385 * ** * * * ** * * consensus_16620#3 TCAGGGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTT-GCTGG 422 consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TCAGTGATTCCATCAGCAAAAGTAAACAACGCTGAATCAGCTACAGTTGAGCTTTGCTGG 426 consensus_16620#4 TGTTTATTTCCTTTACCAGAAGTTC-TAATGTATTTTGAATGATGTCCTGGCTCTGAGGA 368 consensus_16620#1 GGTGGTTGTACATTTGTGTACTGGTGTTGG-AGAGTCGAAA-CTAGCATTGCTTAGTGTG 634 consensus_16620#2 GGTGGTTGTACATTTGTGTACTGGTGTTGGGAGACTCGAAAACTAGCATTGCTTAGTGTG 445 consensus_16620#3 AGGAGACCATCAGGACTCACTTTCAAAATCCCTCCTTCTGAATTTAACTTGAACCCATGG 482 consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 AGGAGACCATCAGGACTCACTTTCAAAATCCCTCCTTCTGAATTTAACTTGAACCCATTG 486 consensus_16620#4 CTCAACTCATCCACAAGTAGT--------------------------------------- 389 consensus_16620#1 TATATTAGATTGATCTTCAATTATTTGAACACTAGTAATA--TTTGTTGCTAAAAAAA-- 690 consensus_16620#2 TATATTAGATTGATCTTCAATTATTTGAACACTGCTAATGAGCCCTATATTAGATTGATC 505 consensus_16620#3 TCCTCCACAAATTGGTTGAACTTATNGANTACTTCTAATATCGTGATATCAAG------- 535 consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TCCTCCACAAATTTGTTGAACTTATTGAT-ACTTCTAATATC-TGATATCAAGCGATGAG 544 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 TTCAATTAAAAAAAAAAAAAAAAAAAAAAAAACTC------------------------- 540 consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TGGAAATTGTGGTATGATTTAGTGCATAGCCATTAACAAGAGTCCATGCAGCATATTCAC 604 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TTTCCCTAGATAAAACTTGGAAATCAGAATAAATGGGCTTCTCCCATGTCAGCTCCCCTG 664 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 ATGTACTTGCAAGAGTTGCATGTTTATTTCCTTTACCAGAAGTTCTAATGTATTTTTGAA 724 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TGATGTCCTGGCTCTGAGGACTCAACTCATCCACAAGTAGTTCTGAAATGAATATCCTTG 784 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 GCAAAGGCCCATAAACACCAGTTCCAGTGTATCCATCATTGGTGGGAGGAGAAAACCATA 844 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 GTGCTCTTAACTTTTTTGCTGGAAACCTTAGTTCTTCACGAGGGACATAACCAAAGTCAG 904 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TAAAAAATTCAGCAAGTGATTTTATACCATAACCATCAACTCCAAATGTTCTGAAAGCAA 964 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 AATGATCATAGCAAATGTGGTCCCCATCATAAGAACGAACAAGTTCCAGGATGGTTTTGG 1024 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 CAGTTGGATTTCTGCTCAGATATACTTTCTCCATGTTTGAGATAACTGTCCGGAAAAATG 1084 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 AATCAGCACCCTTGGGGAGGGCATCGGCGGGCGCGGGCGGGGCGGACGCAGCTGCCGCCA 1144 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TGGCGATGCCGCGGCGGCGCCGGGTGCCTGGGGTTCCGCTTCCGCCCAGACGTACGGGCG 1204 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 CCGCGGCGGCGGGGGCGAGGCGGCGGAGGCTGAGGATCGCGCCCGCTCCTGGGGATCTCG 1264 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 CGCCGGCAAGGGCCACGGCCATGGACACCGGCGGCGGCGGAGGCGGCGAGCACTGGAGGC 1324 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 GAACCCGGCGGTGGCCGAGGCGGATATAGCCTAGCCTACTACCACTACTACTAGGTTGGA 1384 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 ------------------------------------------------------------ consensus_16620#5 ------------------------------------------------------------ consensus_16620#0 TGCTGCACCACGACAAGCAAGCGAGGCGAGGCGGTGACGGTGACGTGGCGAGCTGATCAG 1444 consensus_16620#4 ------------------------------------------------------------ consensus_16620#1 ------------------------------------------------------------ consensus_16620#2 ------------------------------------------------------------ consensus_16620#3 -------------- consensus_16620#5 -------------- consensus_16620#0 CTGAAGGGGAGGAG 1458 consensus_16620#4 -------------- consensus_16620#1 -------------- consensus_16620#2 -------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||