These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16623#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 1900 fasta sequence [GATTGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAG-TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT-GCGCAGCAG-CCA-G-CGA-G-AAGG-AT-GAATTCAGA-TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT-CCCTGT-CA-AGAAAGGA-TTATCCAAATACTACGAC-GGAAAGTCTCAATCTTTT-GCATGTATGTC-T-GAGGTGAGATGCCTAGA-GGATCTACGCAA-GAA-GGAGAATCCATACAAGAAGATCAAATCATCCA-AGA-GCTATGTA-GCACT-GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA-CATCAATAGCCAAGAAGTCT-GGAAGTTCTTGC-GCAAATCTGATGGCCA-GGAATAACACCAAAAGCATGCTCTATA-GGCCTCCCCCAATTCCT-GTAAACAAAAGCGGATATCATCAGTA-GGAACAGTATCGAAAT-GTTTTTTTTTT-GGGGGGTCAGGGTTTCATCTCTG-TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA-CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAATTTAAAGCAAATGTCTGCAGTACATCCAATTGCCTTGGTTAAAAGAAGAAGAAGAACAGCTTAACGTTAAGGGAGTCCTTTGGTCATCAAAGATGAAAACAAAAGGAATTCAATTCTATAAATATTCCAGACACACAAATTGTAGCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAATGAACCGAAGCCTAATAGTTCAAAATGTTTTGACTCCAACAGGGCTTCAGATCACATCCCAGTATTATCTTGTGGATAGATGGTGATCAAGTCTTGTTATATGGTGAATCCAGGGCACTGGGGAGAACCAAAGAGTAGATAATCCTATCCCAATACGCCTTAGAGTTAGCAGCTGTTAGAAAGCATAGTCGTAAATAGCCTGTGCGACTCCATCTTCATCATTAGTGGCACCAATTATATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGCGCAACACCCAATGATGCTAGCTGTAGCATTTCTATGTCATTTTCTCCATCCCCGATAGCCATTACCTCATCCGGACTAATGCAAAGGTGGTCCAAAAGAATCTTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTCAAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTTCCTTCTATTGCCTTTTCCCAGAATGGCCTCAATGCAGAAGAAATTCCCTCAGGAGTTTCAAGGAAGAGCACTTTCTGTATCTCAGCTGTTCCTAAAAGCT-GATC-AATAGACGAGACTATTTCAGCCTTAGGTTCATGATACACATAATGGAGAGAATCAACCAAAGGATCATCATACATAGAGAAACATCGGTCCTGGCTAAATGCTACTAATGGTACCTTCTGCTCCAAAGAATATAACAATGCCTCTCTGCATACTTCTTGATCTAAATTCCTTTTATAAATTTCTCTTCCTTGCAAACCATAAACCAAGAGGCCCTGAAGAAATATGCCAGGAGATGATTCTGAGACAATTCCAGTTCTTCCAGACAAGTCAACCATATTGAGAGCAT] [+] EMBL CF309940 [GATTGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGAC ] [+] EMBL AK121118 [ TGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAGTTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAATTTAAAGCATATGTCTGCAGTACATCCAATTGCCTTGGTTAAAAGAAGAAGAAGAACAGCTTAACGTTAAGGGAGTCCTTTGGTCATCAAAGATGAAAACAAAAGGAATTCAATTCTATAAATATTCCAGACACACAAATTGTAGCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAATGA ] [+] EMBL CF336603 [ TGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGAGG GAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGACGGGAAAGTCTCAATCTTTT GCATGTATGTCNT GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA A ] [+] EMBL CF314968 [ GAGGAAGCAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAG ] [+] EMBL D42364 [ AAGCAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCACGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAG ] [-] EMBL CB681002 [ tcgGCACGAGGGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTT TTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATG ] [+] EMBL AU057197 [ CAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCA NAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATC ] [+] EMBL AU056983 [ CAAGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCA NAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC TGGAGGTGAGATGCCTAGAGGGATCTACGCAA GAAGGGAGAATCCATACAAGAAGATCAAATCATCCA AGAGGCTATGTA GCACTGGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGNCTCCCCCAATTCCTGGTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCANGGGTTCATCNCTGNTCCTTTTTTCGTTGAG ] [-] EMBL CB673390 [ tctaaAAAAAAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCA ] [+] EMBL C28198 [ AGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAG AGCCCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGANGGCACAACT NCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT NCATGTATGTC T TAGGTGAGA ] [+] EMBL AU057483 [ AGAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCA NAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCAC ] [+] EMBL CA755098 [ GAGAGGAAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GGTAACAAAAGCGGATATCAT ] [+] EMBL AU164918 [ AAGAAGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCA NAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTTGGCATGTATGTC T GAGGTGAGATGCCTAGA GGGTCTACGCAAGGAA GGAGAATCCATACAAGAAGATNAAATCATCCA AGA GCTATGTA GCACTGGGATGGGGACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACCATCAATAGCCAAGAAGTCTGGGAAGTTCTTGCGGCAAATCTGATGGCCAGGGAATAACACCCAAAGCATGNTCTATAGGGCNTCCCCCAATTCCTGGTAAACAAAAGCGGGT TCATCAGTAGGGANCAGTATCGGAATGGTTTTTTTTTTGGGGGGGTCAAGGGTTCAACCCTGg ] [+] EMBL D43523 [ AGAATATATCCATAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGATCCAGAAACCAGAAAAACTGCGAGCATGGGCAAATTTGNTGGAGCTGCGGTTCTTCCAGTATACTGTGAAGAAGAAGATGAAGACTTGTT ] [+] EMBL CB681001 [ ATATATCCTTAG TTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACA ] [+] EMBL CB635503 [ ATAGCTTCTATACACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GCGCAGCAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGAAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAACATGCTCTATA GGCCGCCTCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAG ] [+] EMBL BI805527 [ TTCGAGACATCATCGTCCATCTCA GCGACTCCGATGATGAGGCTCCATTTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTT GC CA CAG CCA G CGA G AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCC AATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATC AATCATCC AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGC AACAGCA CATC ATAGCC AGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACC AAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACCAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTAC ATGAAATTTTTCAaa ] [+] EMBL BI806150 [ CTCAAGAAGACCAGTTTGGCGCA CAT CCATGTCGA G AA G NT GAATTCAGA TANCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGTCCA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCNAATCATCCACAGA GCTATGTATGCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCCAAAGCATGCTCTATA GGCCTCCCCC ATTCCT GTAAACCAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACCAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTAC ATGAAATTTTTCAaaa ] [+] EMBL BI806136 [ AAGACC G TT GCCCACCAC CCA G CGA G AAGG AT GAATTCAGA TA CCTCTACGATCTGTCATCTATGAAGCCAC ACT CCCTGT CACAGAAAGGA TATCC AATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCNAACAGCA CATC ATAGCCNAGAAGTCT GGAAGTTCTTGC GC AATCTGATGGCCA GGAATAACACC AAAGCATGCTCTATA GGCCTCCCCC ATTCCT GTAAACCAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTAC ATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACA CCTTCTGTCGAAATTTAAAAAAAA ] [+] EMBL BI806743 [ CACCAA CCA G CGA GAAAGGAATGGAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCC AATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCCAAAGCATGCTCTATA GGCCTCCCCC ATTCCT GTAAACCAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGAaaaaaaaaa ] [-] EMBL CF291621 [ AAGG AT GAATTCAGA TAGCCTCTACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACaaaaaa ] [-] EMBL AF521982 [ tTTCGTA GATCCTCCACGATCTGTCATCTATGAAGGCACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGAAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTAAGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAACATGCTCTATA GGCCGCCTCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTCTTTTT GGGGGTCAGGGTTTCATCTCTG TTCTTTTTCCGCTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTNCATTGGA CTGGGGATGATGTACAGC ] [+] EMBL BQ908214 [ ttcCAGATTAGCCTCTACGATCTGTCATCTATGAAGGCACCACTCCCCNGT CA AGAAAGGATTTATCCAAATACTACG C GGAAAGTCTCAATCTTTTGGCANGTATGTC T GAGGTGAGATNCCTAGA GGATTTACGAAA GAA GGAGAATCCATACCAGAAGATCCAATCATCCC AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCCATAGCCCAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACNCCCAAAACATGCTCTATA GGCCGCCTCCCATTCCT GTAAACCAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACCAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAAaaaaaaa ] [-] EMBL BI306285 [ ACAACT CCCTGT CA AGAAAGGA TTATCCAAATACTACGAC GGAAAGTTTCAATCTTTT GCATGTATGTT T GAGGTGAGATGCCTAGA GGATTTACGAAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAAGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTTT GGAAGTTTTTGC GCAAATTTGATGGCCA GGAATAACCCCAAAAACATGCTTTATA GGCCTCCTCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAA GTTTTTTTTTT GGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTTTTTGCCATATA CAGAGAGTCGTTTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATG ] [-] EMBL CF309941 [ GGA TTATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCAaaaaaa ] [-] EMBL CF336604 [ ATCCAAATACTACGAC GGAAAGTCTCAATCTTTT GCATGTATGTC T GAGGTGAGATGCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAATTTAAAGCAAAaaa ] [+] EMBL AU057484 [ TT GCATGTATGTC T GAGNTGAGATNCCTAGA GGATCTACGCAA GAA GGAGAATCCATACAAGAAGATCAAATCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCAaaaa ] [+] EMBL AU057198 [ TCATCCA AGA GCTATGTA GCACT GGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCA CATCAATAGCCAAGAAGTCT GGAAGTTCTTGC GCAAATCTGATGGCCA GGAATAACACCAAAAGCATGCTCTATA GGCCTCCCCCAATTCCT GTAAACAAAAGCGGATATCATCAGTA GGAACAGTATCGAAAT GTTTTTTTTTT GGGGGGTCAGGGTTTCATCTCTG TTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATA CAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAATTTAAAaaaa ] [+] EMBL CB659079 [ GTCATCAAAGATGAAAACAAAAGGAATTCAATTCTATAAATATTCCAGACACACAAATTGTAGCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAATGAACCGAAGCCTAATAGTTCAAAATGTTTTGACTCCAACAGGGCTTCAGATCACATCCCAGTATTATCTTGTGGATAGATGGTGATCAAGTCTTGTTATATGGTGAATCCAGGGCACTGGGGAGAACCAAAGAGTAGATAATCCTATCCCAATACGCCTTAGAGTTAGCAGCTGTTAGAAAGCATAGTCGTAAATAGCCTGTGCGACTCCATCTTCATCATTAGTGGCACCAATTATATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGCGCAACACCCAATGATGCTAGCTGTAGCATTTCTATGTCATTTTCTCCATCCCCGATAGCCATTACCTCATCCGGACTAATGCAAAGGTGGTCCAAAAGAATCTTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTCAAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTTCCTTCTATTGCCTTTTCCCAGAATGGCCTCAATGCAGAAGAAATTCCCTCAGGAGTTTCAAGGAAGAGCACTTTCTGTATCTCAGCTGTTCCTAAAAGCT GATC AATAGACGAGACTATTTCAGCCTTAGGTTCATGATACACATAATGGAGAGAATCAACCAAAGGATCATCATACATAGAGAAACATCGGTCCTGGCTAAATGCTACTAATGGTACCTTCTGCTCCAAAGAATATAACAATGCCTCTCTGCATACTTCT ] [+] EMBL CB638225 [ aGAATTCAATTCTATAAATATTCCAGACACACAAATTGTAGCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAATGAACCGAAGCCTAATAGTTCAAAATGTTTTGACTCCAACAGGGCTTCAGATCACATCCCAGTATTATCTTGTGGATAGATGGTGATCAAGTCTTGTTATATGGTGAATCCAGGGCACTGGGGAGAACCAAAGAGTAGATAATCCTATCCCAATACGCCTTAAAGTTAGCAGCTGTTAAAAAGCATAGTCGTAAATAGCCTGTGCGACTCCATCTTCATCATTAGTGGCACCAATTATATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGCGCAACACCCAATGATGCTAGCTGTAGCATTTCTATGTCATTTTCTCCATCCCCGATAGCCATTACCTCATCCGGACTAATGCAAAGGTGGTCCAAAAGAATCTTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTCAAGCATATCAGGCTGTGCTTGAACCACACG ] [-] EMBL D43108 [ gGCTGTNCCTAAAAGCTGGATCAAATAGCCGAGACTATTTCAGCCTTAGGTTCATGATACACATAATGGAGAGAATCAACCAAAGGATCATCATACATAGAGAAGCATCGGTCCTGGCTAAATGCTACTAATGGTACCTTCTGCTCCAAAGAATATAACAATGCCTCTCTGCATACTTCTTGATCTAAATTCCTTTTATAAATTTCTCTTCCTTGCAAACCATAAACCAAGAGGCCCTGAAGAAATATGCCAGGAGATGATTCTGAGACAATTCCAGTTCTTCCAGACAAGTCAACCATATTGAGAGCAT] consensusID : consensus_16623#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence [GACAGATGAAGACTTGTTCGAACCATCATTGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAATTNAGATAGCCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTATCCAAATACTACGACGGAAAGTCTCAACCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCTACGAAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTAGCCCTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAAGAAGTCTGGAAGTTCTTGCGCAAATTTGATGGCCAGGAATAACACCAAAAACATGCTCTATAGGCCGCCTCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAATGTTTTTTTTTGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTGACAAGCAAATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAACGAAATTTTTCAAAAAAAAAAAA] [-] EMBL CA759749 [GACAGATGAAGACTTGTTCGAACCATCATTGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTCAGACAGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAATTNAGATAGCCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTATCCAAATACTACGACGGAAAGTCTCAACCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCTACGAAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTAGCCCTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAAGAAGTCTGGAAGTTCTTGCGCAAATTTGATGGCCAGGAATAACACCAAAAACATGCTCTATAGGCCGCCTCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAATGTTTTTTTTTGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTGACAAGCAAATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAACGAAATTTTTCAAAAAAAAAAAA] consensusID : consensus_16623#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 566 fasta sequence [TGCANGAGCTCGTGCCGAATCCGGCACGAAGCAAAAGGAAAATTTTCTCACAGGGCAAGTGCTTTGTTGTTCTTTGCAGGAAAGGATTATCCAAATACTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCTACG-AAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTA-NCACTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAAGAAGTCTGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAAAAGCATGCTCTATAGGCCTCCCCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAATGTTTTTTTTTTGGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AA751970 [TGCANGAGCTCGTGCCGAATCCGGCACGAAGCAAAAGGAAAATTTTCTCACAGGGCAAGTGCTTTGTTGTTCTTTGCAGGAAAGGATTATCCAAATACTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCTACG AAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTA NCACTGGATGGGAACCAGNAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAANAAGTCTGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAAAAACATGCTCTATAGGCCGCCTCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCNAAATGTTTTTTTTTT GGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAAGATTTTGTTGACAAGCATATTAACCTGTCACGGATGTTAG ] [+] EMBL AU056984 [ GAGGATCTACGCCAAGAAGGAG ATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTAGCCACTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAAGAAGTCTGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAAAAGCATGCTCTATAGGCCTCCCCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAATGTTTTTTTTTTGGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGNGAAAAAAAAAAAAAAAAAA ] [+] EMBL AU031518 [ AACCAGGAAGCTTGTCATATACCTGGCGNAAACAGCACATCAATAGCCAAGAANTCTGGAAGTTCTTGCGCAAATNTGATGGCCAGGAATAACNCCAAAAGCATGCTCTATAGGCCTCCCCNAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAATGTTTTTTTTTTGGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTGANAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGNGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_16623#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 542 fasta sequence [AACTCCCTGTCAAGAAAGGATATCCAATACTACGGCGGAAATTCTCAATCTTGTGCATGTATGTCTGAGGTGAGATCCTAGAGGATCTACGAAAGAAGGAGAATCCATACAAGTAGATCAATCATCCAAGAGTCTATTGTAGCACCTGGGATGGGAACCAAGGAAGCCTTGTTCATATACCTGGGCGCAAACAGCACATCAATAGCCAAGAAGTGCTGGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAACATGCTCTATAGCCCGCCTCCAATTCCTGTGAAACAAAGCGGATGATCATCAGTAGGAACAGTATCGAAATGTTTTTTTGTTTGGGGGTCCAGGGTTCTCATCTCTGTTCTGTTTGTTGCGTGTGGAGGGATTGTTGGTGTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGGGGATGAAGAAAAAAA] [+] EMBL BI812271 [AACTCCCTGTCAAGAAAGGATATCCAATACTACGGCGGAAATTCTCAATCTTGTGCATGTATGTCTGAGGTGAGATCCTAGAGGATCTACGAAAGAAGGAGAATCCATACAAGTAGATCAATCATCCAAGAGTCTATTGTAGCACCTGGGATGGGAACCAAGGAAGCCTTGTTCATATACCTGGGCGCAAACAGCACATCAATAGCCAAGAAGTGCTGGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAACATGCTCTATAGCCCGCCTCCAATTCCTGTGAAACAAAGCGGATGATCATCAGTAGGAACAGTATCGAAATGTTTTTTTGTTTGGGGGTCCAGGGTTCTCATCTCTGTTCTGTTTGTTGCGTGTGGAGGGATTGTTGGTGTGACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTGGACTGGGGATGAAGAAAAAAA] consensusID : consensus_16623#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence [TCATCATTAGTGGCACCANNTATATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGNGCAACACCCAATGATGCTAGCTGNAGCATTTCNATGTCATTTTCTCCATCCCNGATAGCCATTACNTCATCCGGACTAATGCAAAGGTGGTCCAGATATAGNACATATTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTCAAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTTCCTTTTATTGCCTTTTCCCAGAATGGCCTCAANGCAGAAGAAATTCCCTCNGGAGTTTCAAGGAAGAGCACTTTCTGTATCTTCAGCTGTTCCTAAAAGCTGATCAATAGACGAGANCATTTCAGCGTTAGGTTNATGATACACATAATGGANAGAATCAACCNGGAGGATCATCATANATAGAGAAGCATCGGTCCTGGCTAAAAAATACTATTTNTACNTTGGGGNCCCCAAAGNATATNACTTTTGCTAAAA] [-] EMBL AA754536 [TCATCATTAGTGGCACCANNTATATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGNGCAACACCCAATGATGCTAGCTGNAGCATTTCNATGTCATTTTCTCCATCCCNGATAGCCATTACNTCATCCGGACTAATGCAAAGGTGGTCCAGATATAGNACATATTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTCAAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTTCCTTTTATTGCCTTTTCCCAGAATGGCCTCAANGCAGAAGAAATTCCCTCNGGAGTTTCAAGGAAGAGCACTTTCTGTATCTTCAGCTGTTCCTAAAAGCTGATCAATAGACGAGANCATTTCAGCGTTAGGTTNATGATACACATAATGGANAGAATCAACCNGGAGGATCATCATANATAGAGAAGCATCGGTCCTGGCTAAAAAATACTATTTNTACNTTGGGGNCCCCAAAGNATATNACTTTTGCTAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GATTGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAGTTCTATACACAAA 60 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATGGGCAA 120 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ---------------------------------------GACAGATGAAGACTTGTTCGA 21 consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 ATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTGTTCGA 180 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ACCATCATTGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTT-CAGACAGCGAGGA 80 consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGCGAGGA 240 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 AGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAATTNAGATAG 140 consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 --------------TGCANGAGCTCGTGCCGAATCCGGCACGAAGCAAAAGGAAAATTTT 46 consensus_16623#0 AGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAATTCAGATAG 300 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 CCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTATCCAAATA 200 consensus_16623#3 -----------------------------AACTCCCTGTCAAGAAAGGAT-ATCCAA-TA 29 consensus_16623#2 CTCACAGGGCAAGTGCTTTGTT--------GTTCTTTG-CAGGAAAGGATTATCCAAATA 97 consensus_16623#0 CCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTATCCAAATA 360 consensus_16623#4 -----------------------------------TCATCATTAGTGGCA---CCANNTA 22 ** * ** *** ** consensus_16623#1 CTACGACGGAAAGTCTCAACCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCT 260 consensus_16623#3 CTACGGCGGAAATTCTCAATCTTGTGCATGTATGTCTGAGGTGAGAT-CCTAGAGGATCT 88 consensus_16623#2 CTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCT 157 consensus_16623#0 CTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAGGATCT 420 consensus_16623#4 TATTTGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGN-GCAACACCCAATGA---T 78 * * * * * ** * ** * * ** * * * consensus_16623#1 ACGAAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAG-CTAT-GTAGC--CC 316 consensus_16623#3 ACGAAAGAAGGAGAATCCATACAAGTAGATCAA-TCATCCAAGAGTCTATTGTAGCACCT 147 consensus_16623#2 ACGAAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAG-CTAT-GTANCA--C 213 consensus_16623#0 ACGCAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAG-CTAT-GTAGCA--C 476 consensus_16623#4 GCTAGCTGNAGCATTTCNATGTCATTTTCTCCATCC--CNGATAG-CCATTACNTCA-TC 134 * * ** ** * ** * * * * ** * ** * consensus_16623#1 TGGATGGGAACCA-GGAAGCTT----GTCATATACCTGG-CGCAAACAGCACATCAATAG 370 consensus_16623#3 GGGATGGGAACCAAGGAAGCCTTG--TTCATATACCTGGGCGCAAACAGCACATCAATAG 205 consensus_16623#2 TGGATGGGAACCA-GGAAGCTT----GTCATATACCTGG-CGCAAACAGCACATCAATAG 267 consensus_16623#0 TGGATGGGAACCA-GGAAGCTT----GTCATATACCTGG-CGCAAACAGCACATCAATAG 530 consensus_16623#4 CGGACTAATGCAAAGGTGGTCCAGATATAGNACATATTCACCCCATTGCCTTTTGAAGTT 194 *** * * ** * * * * * * * * * * ** consensus_16623#1 CCAAGAAGTCT--GGAAGTTCTTGCGCAAATTTGATGGC-CAGGAATAACACCAAAAACA 427 consensus_16623#3 CCAAGAAGTGCTGGGAAGTTCTTGCGCAAATCTGATGGC-CAGGAATAACACCAA---CA 261 consensus_16623#2 CCAAGAAGTCT--GGAAGTTCTTGCGCAAATCTGATGGC-CAGGAATAACACCAAAAGCA 324 consensus_16623#0 CCAAGAAGTCT--GGAAGTTCTTGCGCAAATCTGATGGC-CAGGAATAACACCAAAAGCA 587 consensus_16623#4 GCAGGAGGTAC----AAGTTC--AAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTT 248 ** ** ** ****** *** ** * * * *** **** consensus_16623#1 TGCTCTATAGGCCGCCTCCA--ATTCCTGTAAACAAAAGCGGAT-ATCATCAGTAGGAAC 484 consensus_16623#3 TGCTCTATAGCCCGCCTCCA--ATTCCTGTGAAACAAAGCGGATGATCATCAGTAGGAAC 319 consensus_16623#2 TGCTCTATAGGCCTCCCCCA--ATTCCTGTAAACAAAAGCGGAT-ATCATCAGTAGGAAC 381 consensus_16623#0 TGCTCTATAGGCCTCCCCCA--ATTCCTGTAAACAAAAGCGGAT-ATCATCAGTAGGAAC 644 consensus_16623#4 CCTTTTATTGCCTTTTCCCAGAATGGCCTCAANGCAGAAGAAAT-TCCCTCNGGAGTTTC 307 * *** * * *** ** * * * * ** * ** * ** * consensus_16623#1 AGTATCGAAATGTTTTTTT--TTGGGGGTC-AGGGTT-TCATCTCTGTTCTTTTTT---- 536 consensus_16623#3 AGTATCGAAATGTTTTTTTGTTTGGGGGTCCAGGGTTCTCATCTCTGTTCTGTTTGTTGC 379 consensus_16623#2 AGTATCGAAATGTTTTTTTTTTGGGGGGTC-AGGGTT-TCATCTCTGTTCTTTTTT---- 435 consensus_16623#0 AGTATCGAAATGTTTTTTTTTTGGGGGGTC-AGGGTT-TCATCTCTGTTCTTTTTT---- 698 consensus_16623#4 AAGGAAGAGCACTTTCTGTATCTTCAGCT----GTTCCTAAAAGCTGATCAATA------ 357 * ** *** * * * * * * * * *** ** * consensus_16623#1 -CGTTGAGGATTTTGT----TGACAAGCAAATTA-GCCTGTCACGGATGTAAGAGGATTT 590 consensus_16623#3 GTGTGGAGGGATTGTTGGTGTGACAAGCATATTA-GCCTGTCACGGATGTAAGAGGATTT 438 consensus_16623#2 -CGTTGAGGATTTTGT----TGACAAGCATATTA-GCCTGTCACGGATGTAAGAGGATTT 489 consensus_16623#0 -CGTTGAGGATTTTGT----TGACAAGCATATTA-GCCTGTCACGGATGTAAGAGGATTT 752 consensus_16623#4 --GACGAGANCATTTCAG--CGTTAGGTTNATGATACACATAATGGANA-GAATCAACCN 412 * *** * * * * ** * * * * *** * * consensus_16623#1 CGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAA 650 consensus_16623#3 CGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAA 498 consensus_16623#2 CGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGNGAAAAAAAAAAAAAAAAAAAA 549 consensus_16623#0 CGTTCTCTGCCATATACAGAGAGTCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAA 812 consensus_16623#4 GGAGGATCATCATANATAGAGAAGCATCG-GTCCTGGCTAAAAAATACTATTTNTACNTT 471 * **** * ***** * ** ** * * * * * consensus_16623#1 TACTACAACGAAATTTTTCAAAAAAAAAAAA----------------------------- 681 consensus_16623#3 TACTACAATGAAATTTTTCATTGGACTGGGGATGAAGAAAAAAA---------------- 542 consensus_16623#2 AAAAAAAAAAAAAAAAA------------------------------------------- 566 consensus_16623#0 TACTACAATGAAATTTTTCATTGGACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAAT 872 consensus_16623#4 GGGGNCCCCAAAGNATATNACTTTTGCTAAAA---------------------------- 503 ** consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TTAAAGCAAATGTCTGCAGTACATCCAATTGCCTTGGTTAAAAGAAGAAGAAGAACAGCT 932 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TAACGTTAAGGGAGTCCTTTGGTCATCAAAGATGAAAACAAAAGGAATTCAATTCTATAA 992 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 ATATTCCAGACACACAAATTGTAGCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAAT 1052 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GAACCGAAGCCTAATAGTTCAAAATGTTTTGACTCCAACAGGGCTTCAGATCACATCCCA 1112 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GTATTATCTTGTGGATAGATGGTGATCAAGTCTTGTTATATGGTGAATCCAGGGCACTGG 1172 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 GGAGAACCAAAGAGTAGATAATCCTATCCCAATACGCCTTAGAGTTAGCAGCTGTTAGAA 1232 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 AGCATAGTCGTAAATAGCCTGTGCGACTCCATCTTCATCATTAGTGGCACCAATTATATT 1292 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TGCCACTGCTTTGGTTTTCTCAGACCCATTTGCAAGCGCAACACCCAATGATGCTAGCTG 1352 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TAGCATTTCTATGTCATTTTCTCCATCCCCGATAGCCATTACCTCATCCGGACTAATGCA 1412 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 AAGGTGGTCCAAAAGAATCTTCACCCCATTGCCTTTTGAAGTTGCAGGAGGTACAAGTTC 1472 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 AAGCATATCAGGCTGTGCTTGAACCACACGGGCCCTTCCTTCTATTGCCTTTTCCCAGAA 1532 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TGGCCTCAATGCAGAAGAAATTCCCTCAGGAGTTTCAAGGAAGAGCACTTTCTGTATCTC 1592 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 AGCTGTTCCTAAAAGCTGATCAATAGACGAGACTATTTCAGCCTTAGGTTCATGATACAC 1652 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 ATAATGGAGAGAATCAACCAAAGGATCATCATACATAGAGAAACATCGGTCCTGGCTAAA 1712 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 TGCTACTAATGGTACCTTCTGCTCCAAAGAATATAACAATGCCTCTCTGCATACTTCTTG 1772 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 ATCTAAATTCCTTTTATAAATTTCTCTTCCTTGCAAACCATAAACCAAGAGGCCCTGAAG 1832 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 ------------------------------------------------------------ consensus_16623#3 ------------------------------------------------------------ consensus_16623#2 ------------------------------------------------------------ consensus_16623#0 AAATATGCCAGGAGATGATTCTGAGACAATTCCAGTTCTTCCAGACAAGTCAACCATATT 1892 consensus_16623#4 ------------------------------------------------------------ consensus_16623#1 -------- consensus_16623#3 -------- consensus_16623#2 -------- consensus_16623#0 GAGAGCAT 1900 consensus_16623#4 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||