These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16672#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1206 fasta sequence [CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGCATATTTTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT-AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA-T-GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA-GGTATACTGTTTCC-TGCCACTCAAATGAA-GCA-TGGT-AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG-TT-TTGCAACAACCAGCACAACAACTG-CAATGGTGTTGAGG-AA-GAG-CATAGGATGTTGATAATCTGTCGTGTG-CAAGG-CTATCAAGTATAGG-ACCAAAGGAACCACGG-TCAG-AAA-TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAGCAGCCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGAGGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACACCGCGCCACCAATGCCGTCACACCGCA] [+] EMBL CF295436 [CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGCATATTGTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG ATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAATTTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAAT ] [+] EMBL CF278130 [ TTTTTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAAAGCCTAAAGAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAAT ] [+] EMBL CF279517 [ TTTTTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAAACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAAAGCCTAAAGAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAGNAAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCC ] [-] EMBL AK064998 [ CTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACATGTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAGCAGCCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGAGGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACACCGCGCCACCAATGCCGTCACACCGCA] [-] EMBL CF314783 [ TATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTTCTACTC ] [-] EMBL BM420763 [ ttTAACAACATTAACAGCAAAATAAAGTTTC TTTNGGGGGGATNACGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCAGTGGCCTTTAGCTCTGTACAAGGATTACATGTCATCTACTAACAGCTCTTAAAAATTACTCACTCTGGTTATCCATTCAGAACTAGGGTATACTGTTTCCGTGCCACTCAAATGAAGGCAGTGGTCAGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGCTTCTTGCAACAACCAGCACAACAACTGCCAACGGTGTTGAGGCAACGAGCCATAGGATGTTGATAATCTGTCGTGTGCCGAGGCCTATCAAGTATAGGCACCAAAGGAACCACGGCTCAG AAA TTTTCTG TGCGAGTAAGCTGNTTCCCATGGTCCATTTGCTCCCACCAAGTCAATCTATTA ] [-] EMBL CB001012 [ ttttttTTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGCGAAAAAAATGGT ] [-] EMBL CB001032 [ ttttttTTAACAGCAAAATAAAGTTTCTTTTTGGTGGGAT AAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCA T GCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTAAAAACTACTCACTCTGGTTATCCATTCAGAACTA GGTATACTGTTTCC TGCCACTCAAATGAA GCA TGGT AGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAG TT TTGCAACAACCAGCACAACAACTG CAATGGTGTTGAGG AA GAG CATAGGATGTTGATAATCTGTCGTGTG CAAGG CTATCAAGTATAGG ACCAAAGGAACCACGG TCAG AAA TTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGT ] [-] EMBL CF295435 [ CCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG ] [-] EMBL CF292906 [ GAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCNCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGT ] consensusID : consensus_16672#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1011 fasta sequence [CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC-AACCTGTAGGCAAATTATAAG-CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG-CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC-TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA-GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT-CAG-ATATCTG-CATT-GATTCCAAA-TATAC-GGACCTTGTGCATGTTTGGCAGCTTTGCTA-CCACTAGTACCAGAACTGCAATGGTGTTGAG-GAAAAGCATT-GGCTGTTTGTAGTC-GGTCAAGT-GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC-GAGTAAGTTGCTGCCCGTTATC-AATTT-GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG-CAGCAAATGGAGTTCCCTTCTTCCAAT-GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG-AACCACTCCGTGTTCTTGTTCACGTCC-ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG-CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTACTC] [+] EMBL CF332114 [CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTCTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGG ] [-] EMBL C98223 [ TTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CNGTGGTGAAAAAGTTTAGTTTTTTCACTACTTTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACAGGAAGCTTGTGCCCTGATGTTCTTCATATGGTCCTCCAGTATATCTGCCATTGGATTCCAAATTATACGGGACCTTGTGCATGTTTGGCAGCTTTGNTACCCACTAGGACCAGAACTGCAATGGTGTTGAGNGAAAAGCATTGGGCTGTTTGTAGTCGGGCCAANTGGTGAC ] [+] EMBL CF295136 [ TTTTTTTTTTTTTTTGCAAGTTCTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTTTTCACTCCCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATTCTTTTTCCTCC AACCTGTAGGCTATTTATAAG CTACAGTAACATTTTCTTTTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAAATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGC ] [+] EMBL CF334716 [ TTTTTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGG ] [+] EMBL CF292006 [ TTTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTCTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACCAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTT ] [-] EMBL AU083393 [ TTTTTGCAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGG ] [-] EMBL AK099046 [ AACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGAT ] [-] EMBL AK061880 [ TCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGG ] [-] EMBL AU083405 [ tTTTTAACAACCACCAAACTTTCCATATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGNCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGNTATC AATTTGGTCCCCACCAAGTTAGTCNGTTGTAGATGCCTTGGTCATNAGCCAGCAA ] [-] EMBL AU083386 [ ttttttTATCCACAAGATTACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCATGAGCAAACATGCAGCAGCCTCC AACCTGTAGGCAAATTATAAG CTACAGTAACATTTACAGGTTCTTCCTACACCTATGCACATACTACAGATTG CAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGAAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAATGGGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCNGGGGAACAGGCGGAGACCGANAGGACGAGCAGCCAGGCCAAGAANAGGAGGAG ] [-] EMBL C27905 [ GCAGAAGCCCCCAAACCTGNAGGCAAATTATAAGCCTACAGTANCATTTACAGGTTCCTCCTACACCTATGCACATACTACAGATTGCCAGTGGTGAAAAAGTTTAGTTTTTTCACTAC TTTAGATACCGTGTTTGCACAAAGTTCGCTTGTCCCTCGTTGCAAACACACA GAAGCTTGTGCCCTGATGTTCTTCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGANGCGATCAGGTACAGCACCACAGGT ] [+] EMBL CF281974 [ AAACACACA CAAGCTTGTGCCCTGATGTTCTCCATATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTCTGCTA CCACTAGTACCAGAACTGCAATGGTGCTGAG GAAAAGCTTT GGCTGTCTGTAGTCag ] [-] EMBL CF332113 [ TATGGTCCT CAG ATATCTG CATT GATTCCAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTG TGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGATCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTCCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGAT ] [-] EMBL CF292005 [ CAAA TATAC GGACCTTGTGCATGTTTGGCAGCTTTGCTA CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTACTC] [-] EMBL AU198157 [ A CCACTAGTACCAGAACTGCAATGGTGTTGAG GAAAAGCATT GGCTGTTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCC ] [-] EMBL CF334715 [ TTTGTAGTC GGTCAAGT GTGACGCGATCAGGTACAGCACCACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATgatacccta] [-] EMBL C93537 [ CAAAT TTNACCCGATCAGGTACAGCACNACAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGAATGTAGGTGGTCCACACCCCGGGGTACATG ANACACTCCGTGTTCTTGTTCACGTCCNANCG NGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGT ] [-] EMBL AW069965 [ gccgAGGTACCACAGTCAAGAACTTCCTATTAC GAGTAAGTTGCTGCCCGTTATC AATTT GTTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACAC ] [-] EMBL C74842 [ ATTACGGAGTAA TTGCTTCCCGTTATCAAATTT GTTCCCCACAAATTAGTCTGTTGTAGATGCNTTGGTCATCAG CAGCAAATGGAG TCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGTGGGCGANGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAAACCACTCCGTGTTCTTGTTCACGTCCAACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGA ] [-] EMBL AU093274 [ AAGTTAGTCTGTTGAAGATGCCTTGGTCATCAG CAGCAAATGGAGTTCCCTTCTTCCAAT GGAAGAAGTGATAAGTGATGGCGAAGT GGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AACCACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGT ] [-] EMBL AU069352 [ CCTTGGTCATCAG CAGCAAATGGAG TCCCTTCTTCCAAT GGAAGAAGTGATAANTGATGGCGAAGTGGCCGAGGTTGACGACGGTCCACGCGATCCCGGGGAAGCAGGCGGAGACGNAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AAACACTCCGTGTTCTTGTTCACGTCC AACCGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGT ] [-] EMBL OSC1581 [ GAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGNCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATG AAACACTCCGTGTTCTTGTTCACGTCC ACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCG CCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTG ] consensusID : consensus_16672#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 967 fasta sequence [ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATCAATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCACGACGCATAACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAACAGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTGAAGGCGTAGTTGGACTTGAGTTCAACCTGAACAGATTGTACATACACCAAGAAATCTCTTTTGACTTTTGCAAGGTTGGAATATACTTGAGACAAACTAGCAGAGAAAAAGGTAAGGAAGATTATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAAAGATATTTGTGAAGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTATCTCATCAAAGATAGTACCAAAGAAGAACAGCAGCAGAAGCGACTCTCAGATCGGGTGCGTGAGACCAACACGCGACAGGATAGGACTAGCTAGCGGCGCTAATCAAGAACGGATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGGATGGATGGATGAATGAATCGGGGGGCGAGGCGGGACGTACGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTCCACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT] [-] EMBL AK109311 [ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATCAATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCACGACGCATAACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAACAGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTGAAGGCGTAGTTGGACTTGAGTTCAACCTGAACAGATTGTACATACACCAAGAAATCTCTTTTGACTTTTGCAAGGTTGGAATATACTTGAGACAAACTAGCAGAGAAAAAGGTAAGGAAGATTATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAAAGATATTTGTGAAGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTATCTCATCAAAGATAGTACCAAAGAAGAACAGCAGCAGAAGCGACTCTCAGATCGGGTGCGTGAGACCAACACGCGACAGGATAGGACTAGCTAGCGGCGCTAATCAAGAACGGATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGGATGGATGGATGAATGAATCGGGGGGCGAGGCGGGACGTACGGCGAAGTGGGCGAGGTTGACGACGGTCCACGCGATCCCGGGGGAGCAGGCGGAGACGGAGAGGACGAGCAGCCAGGCGAAGAAGAGGAGGAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTCCACCGGCGGCGCCGCCTCCACGTAGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCCTCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCGTGCGGTGCGGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT] consensusID : consensus_16672#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 756 fasta sequence [CTGTGAGTCTGTGACTATGCGGGTAACAAACATCAGAGCTATATGTTAATTCCTTGCATACCTACTGAAAGTCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATTTTCAATGCTGTAGTGAAAAGGAAAATCAATCGCAACAGATTTATTCTTACAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAACAACCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG] [-] EMBL CF307515 [CTGTGAGTCTGTGACTATGCGGGTAACAAACATCAGAGCTATATGTTAATTCCTTGCATACCTACTGAAAGTCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATTTTCAATGCTGTAGTGAAAAGGAAAATCAATCGCAACAGATTTATTCTTACAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCAAACGGAGTTCCCTTCTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACGCCATGCCGGGGGTGCAGCCGAAGACGGAGAGGACGAACAACCAGGAGAAGAAGAGGATGAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTG ] [-] EMBL CF278131 [ GAACCACTCCGTGTTCTTGTTCAGATCCGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCCCCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCTGAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAGAGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAGAAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG] consensusID : consensus_16672#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 516 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTTTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGCATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGTTTTGCAACAACCAGCACAACAACTGCAATGGTGTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTAT] [+] EMBL CF292905 [TTTTTTTTTTTTTTTTTTTTTTTTTTTACCCTTGAACAAGAGCACATTTTTAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGGGGGATAAAAGCCTAAAAAAGTGTGTTCACTAAATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTTTTAAAAACTACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGCATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGATCCGGACCTTGTGCATGTTCGGTAGTTTTGCAACAACCAGCACAACAACTGCAATGGTGTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGACCAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTGCTCCCACCAAGTCAATCTATTAT] [-] EMBL CF337175 [ gtgTTTTTTTTTTTTTTTTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATCATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGC ] [-] EMBL AU063472 [ nTTTTTTNTTTTTTTACACTTGAACAAGAGNACATATATAACAACATTAACAGCAAAATAAAGTTTCTTTTTGGTGGGATAAGAGCCTAAAGAAGTGTGTTCACTAGATGCTGAACAACATNATTTCCATGCCTTTAGCTCTGTACAATGATTACATGTCATCTACTAACAGCTCTTNAAAACTACTCACTCTGGTTATCCATTCAGAACTAGGTATACTGTT ] consensusID : consensus_16672#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence [CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCAGTTCTGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCAGATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNGGGTCAAGNGANCTTTGTGCAAACACGGTATCTAAAGTAGTGAAANANCTAAACTTTTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN] [+] EMBL OS1226A [CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTGACCGACTACAAACAGCCAATGCTTTTCCTCAACACCATTGCAGTTCTGGTACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCAGATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNGGGTCAAGNGANCTTTGTGCAAACACGGTATCTAAAGTAGTGAAANANCTAAACTTTTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16672#0 --------CTACGCAACGGCATGACAGTGTTTTTTTTTTTTTTTAGCGATATGAGTAGGC 52 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 CTGTCACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTG 60 consensus_16672#2 --------ACCACCCAGTATGACAAAGAACATATGACAATTGTCAACCCATAATTCTATC 52 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 ATATTTTCTTTCCTGCCTCACATTACGTACACAAAAAATTATTCTCCATAAGACACACAT 112 consensus_16672#4 ----------------------------------------TTTTTTTTTTTTTTTTTTTT 20 consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 CAGGAACTGAACTCCGGTTCACCATTTTAACAACCACCAAACTTTCCATATCCACAAGAT 120 consensus_16672#2 AATGCAACGTTTGTCAATTAGGACAATCAAGAAACGTATGCAAGTCCACAAATAAAGCAC 112 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 GTGACATACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCT 172 consensus_16672#4 TTTTTTTACACTTGAACAAGAGCACATATATAACAACATTAACAGCAAAATAAAGTTTCT 80 consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 TACATGTTTATTTAAGTTACAGTCTACACTCTCCACTAGAGTTCTTAAAGGAAGTGGCAT 180 consensus_16672#2 GACGCATA-ACATAATCTGGATTTAACATTTAACATTTTTTTTAGCGCAATGATGTGAAC 171 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 TTTTGGTGGGATAAGAGCCTA-AAGAAGTG-TGTTCACTAGATGCTG-AACAACATCATT 229 consensus_16672#4 TTTTGGTGGGATAAGAGCCTA-AAGAAGTG-TGTTCACTAGATGCTG-AACAACATCATT 137 consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 GAGCAAACATGCAGCAGCCTCCAACCTGTA-GGCAAATTATAAGCTACAGTAACATTTAC 239 consensus_16672#2 -AGTGAACAGATTCTTGCATCAACTCACTGCTAGTTGTTTTAGACTG--AAGGCGTAGTT 228 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 TCCATGCCTTTAGCTCTGTACAATGATTACATGT--CATCTACTAACAGCTCTTAAAAAC 287 consensus_16672#4 TCCATGCCTTTAGCTCTGTACAATGATTACATGT--CATCTACTAACAGCTTTTAAAAAC 195 consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 AGGTTCTTCCTACACCTATGCACATACTACAGATTGCAGTGGTGAAAAAGTTTAGTTTTT 299 consensus_16672#2 GGACTTGAGTTCAACCTGAACAGATTGTACATAC---ACCAAGAAATCTCTTTTGACTTT 285 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 TACTCACTCTGGTTATCCATTCAGAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGC 347 consensus_16672#4 TACTCACTCTGGTTATCCATTCAAAACTAGGTATACTGTTTCCTGCCACTCAAATGAAGC 255 consensus_16672#3 -----------------------------------------------CTGTGAGTCTGTG 13 consensus_16672#1 TCACTACTTTAGATACCGTGTTTGCACAAAGTTCGCT-TGTCCCTCGTTGCAAACACACA 358 consensus_16672#2 TGCAAGGTTGGAATAT--ACTTGAGACAAACTA----GCAGAGAAAAAGGTAAGGAAGAT 339 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 ATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTAGTTGCCAGCATTGATTCCAAAGA 407 consensus_16672#4 ATGGTAGTGATAACAAACCGTGGGATGCTGCCGCCTATTTGCCAGCATTGATTCCAAAGA 315 consensus_16672#3 ACTATGCGGGTAACAAACATCAGA--GCTATATGTTAATTCCTTGCATACCTACTGAAAG 71 consensus_16672#1 GAAGCTTGTGCCCTGATGTTCTTCATATGGTC-CTCAGATATCTGCATTGATTCCAAATA 417 consensus_16672#2 TATTCCCTGATATTTCAGCTTGCGAAATCGACGCTTCTTTGAGAAAA-AGATATTTGTGA 398 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 TCCGGACCTTGTGCATGTTCGGTAGTT--TTGCAACAACCAGCACAACAACTGCAATGGT 465 consensus_16672#4 TCCGGACCTTGTGCATGTTCGGTAGTT--TTGCAACAACCAGCACAACAACTGCAATGGT 373 consensus_16672#3 TCTGAAACCATTTACTAGTTACTACTTACTGGCTATGTAGAATCAATCATCATCCATATT 131 consensus_16672#1 TACGGACCTTGTGCATGTTTGGCAGCT--TTGCTACCACTAGTACCAGAACTGCAATGGT 475 consensus_16672#2 AGAAGAGAAAAATTATCTCCGCAAGTTGGTGTGTTCCTCGATTCCTTCCGCCACTGTA-T 457 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 GTTGAGGAAGAGCATAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGAC 525 consensus_16672#4 GTTGAGGAAAAACGTAGGATGTTGATAATCTGTCGTGTGCAAGGCTATCAAGTATAGGAC 433 consensus_16672#3 TTCAATGCTGTA-GTGAAAAG--GAAAATCAATCGCA-ACAGATTTATTCT-TACAGGAC 186 consensus_16672#1 GTTGAGGAAAAGCATTGGCTGTTTGTAGTCGGTCAAGTGTGACGCGATCAGGTACAGCAC 535 consensus_16672#2 CTCATCAAAGATAGTACCAAA--GAAGAACAGCAGCAGAAGCGACTCTCAGAT-CGGGTG 514 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 585 consensus_16672#4 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 493 consensus_16672#3 CAAAGGAACCACGGTCAGAAATTTTCTGTTGCGAGTAAGCTGCTTCCCATTGTCCATTTG 246 consensus_16672#1 CACAGGTACCACAGTCAAGAACTTCCTATTACGAGTAAGTTGCTGCCCGTTATCAATTTG 595 consensus_16672#2 CGTGAGACCAACACGCGACAGGAT---AGGACTAGCTAGCGGC-GCTAATCAAGAACG-G 569 consensus_16672#5 ------------CNGNGNACGCNTGGGCTTTTTTGCAGGTACCTGATCGCTTCACACTTG 48 * * * * * * consensus_16672#0 CTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCA---AACGGAGTTCCCTT 642 consensus_16672#4 CTCCCACCAAGTCAATCTATTAT------------------------------------- 516 consensus_16672#3 CTCCCACCAAGTCAATCTATTATACATCCCCTGGTCATCAGCA---AACGGAGTTCCCTT 303 consensus_16672#1 TTCCCACCAAGTTAGTCTGTTGTAGATGCCTTGGTCATCAGCAGCAAATGGAGTTCCCTT 655 consensus_16672#2 ATCGGACTAATGAAAGAAGGAGCAAACTCGCCGTCAATGAATGG--ATGGATGGATGAAT 627 consensus_16672#5 -----ACCGACT--ACAAACAGCCAATGCTTT--TCCTCAACACC-ATTGCAGTTCTGGT 98 ** * consensus_16672#0 -CTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACG 701 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 -CTTCCAGTGAAAAAAATGGTATGTCATCGCGAAGTGGGCGAGGTTGACGAACGTCCACG 362 consensus_16672#1 -CTTCCAATGGAAGAAGTGATAAGTGATGGCGAAGTGGGCGAGGTTGACGACGGTCCACG 714 consensus_16672#2 -GAATCGGGGGGCGAGGCGGGACGT-ACGGCGAAGTGGGCGAGGTTGACGACGGTCCACG 685 consensus_16672#5 ACTAGTGGTAGCAAAGCTGCCAAACATGCACAAGGTCCGTATATTTGGAATCAATGCA-- 156 consensus_16672#0 CCATGCCGGGGGTGCAGCCGAAGACGG--AGAGGACGAGCAGCCAGGAGAAGAAGAGGAT 759 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 CCATGCCGGGGGTGCAGCCGAAGACGG--AGAGGACGAACAACCAGGAGAAGAAGAGGAT 420 consensus_16672#1 CGATCCCGGGGGAGCAGGCGGAGACGG--AGAGGACGAGCAGCCAGGCGAAGAAGAGGAG 772 consensus_16672#2 CGATCCCGGGGGAGCAGGCGGAGACGG--AGAGGACGAGCAGCCAGGCGAAGAAGAGGAG 743 consensus_16672#5 -GATATCTGAGGACCATATGANGAACATCAGGGCACAAGCTTCTGTGTGTTTGCAACGNG 215 consensus_16672#0 GAGGATGTAGGTCGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCAGATC 819 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 GAGGATGTAGGTCGTCCACACACAAGGGTACATGAACCACTCCGTGTTCTTGTTCAGATC 480 consensus_16672#1 GAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTC 832 consensus_16672#2 GAGGATGTAGGTGGTCCACACCCCGGGGTACATGAACCACTCCGTGTTCTTGTTCACGTC 803 consensus_16672#5 GGTCAAGNGANCTTTGTGCAAAC-ACGGTATCTAAAGTA----GTGAAANANCTAAACTT 270 consensus_16672#0 CGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCC 879 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 CGCCGGCTGCACCGCCTGCACGTACAGCTTCGCCATCGATCGCTCCCCCGCCCAAAATCC 540 consensus_16672#1 CACCGGCGGCGCCGCCTCCACGT--AGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCC 890 consensus_16672#2 CACCGGCGGCGCCGCCTCCACGT--AGTAGGGGTAGGACCCCGCCCTCCGCCCCATCTCC 861 consensus_16672#5 TTTCACCACTGCAATCTGTAGTNTGTGCATAGGTGTAGGNN------------------- 311 consensus_16672#0 CCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCT 939 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 CCCTCTCTCCCTCTCGCTAAAGCTGGCGCGCCCTGTGTGCTGCTGCTGGTGGCGCGGCCT 600 consensus_16672#1 TCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCG-TGCGGTGC 949 consensus_16672#2 TCTCCCTCTCCCTACTCCGGCGGCGGCGGCGGCGGCGGTCGGATCTTGGCG-TGCGGTGC 920 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 GAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAG 999 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 GAGCCCGTGGGATTGGAATGGAGGGGGATTTATAGAGGTGGGAGGGAGAAGGCGCGAGAG 660 consensus_16672#1 GGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGTGATGATTTTCTAC 1009 consensus_16672#2 GGGGGTGGGTGGCGCGTGGTGAGTGGTGGTGGTGCTCGTGATGGTGT------------- 967 consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 AGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG 1059 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 AGGGGTTTGCCCAGATTATTGGTCAGAGAGAAGCGGAGCGGAGGGAGGAGGAGGAAGAAG 720 consensus_16672#1 TC---------------------------------------------------------- 1011 consensus_16672#2 ------------------------------------------------------------ consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 AAGGCGAGGAGAAGGTTCAAAGATGGAGGCGAAAAGAAAAAACGCGAGGGGGAGAGGAGA 1119 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 AAGGCGAGGAGAAGGTTCAAAAATGGAGGCGAAAAG------------------------ 756 consensus_16672#1 ------------------------------------------------------------ consensus_16672#2 ------------------------------------------------------------ consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 GGAGACCGACGGGCTGGCTGCCTGGCTGTGCGCCTGTGCGGCTGTGTGCCGCGACGCACA 1179 consensus_16672#4 ------------------------------------------------------------ consensus_16672#3 ------------------------------------------------------------ consensus_16672#1 ------------------------------------------------------------ consensus_16672#2 ------------------------------------------------------------ consensus_16672#5 ------------------------------------------------------------ consensus_16672#0 CCGCGCCACCAATGCCGTCACACCGCA 1206 consensus_16672#4 --------------------------- consensus_16672#3 --------------------------- consensus_16672#1 --------------------------- consensus_16672#2 --------------------------- consensus_16672#5 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||