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Oryza sativa
cluster # 16702 cluster # 16702       Sequences # 40       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16702#0 length = 826 sequences # 35  
consensus_16702#1 length = 559 sequences # 2  
consensus_16702#2 length = 392 sequences # 1  
consensus_16702#3 length = 371 sequences # 1  
consensus_16702#4 length = 338 sequences # 1  

consensusID : consensus_16702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 35
consensus length = 826
fasta sequence
                              [CATCNCCAACAAGAGAGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAG-TACATACGTTGGA-TTGGA-TTGGAGGAGGAGAAT-GCCTCGCGGTGGG-TT-CTCGGGGTCGATAAGCTCG-CCC-AGGATCGACGTC-GCCATCGACATGGGGAA-CCCCTTC-CTCAACCGCACCGTCGACGGCTTCCTCA-AGATC-GGCG-CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC-TGCCTCCA-CAGAGGGG-ATG-TTTCAAAGCACAAGC-TTGAGCATA--TG-C-TGAA-GAAAATG-TG-CAAGGA-GGGT-GCC-TA-TTGGGGTAC--TGTTGCT--GGGGTGTA-T-GT-GG-GCATGGAGTA-CGGAG-TGG-A-GAGGA-TTCG-TG-GTC--GCCA-TGAC-TGGAAGAAT-GC-T-A-TGA-TTGGAGGTGCTTTAA-GT-GGTGCTCTG-ATCTCT-G-C-TG-CC-AG-CAA-C-AACCACA-AAGA-C-A-AGAT-C-A-T-CA-AGGA-CGCCATCACCGGAGGCGCTGTTG-CAA-CAGCTGTCGAGTTCAT-CAACTACCTCACTTAGTCATGT-AACTGCATTTTTG-CAGTGGCTTTTG-TTGGAC-AG-CA-AGAATAAGAGCTTCTTCA-CTGAAGCCATGTTCAG-T-TTAATAAAATGTTACCTTGTTCA----AAAAAAAAACGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAACTGAGATTGAAGCTTGTATGCAATAATTACTTGATGATATTGGCGACTCATGACAGGA]

[-] EMBL CB651914             [CATCNCCAACAAGAGAGAGAAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTGGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTCCCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTCCCTTGTTCA    TCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCCTGATTTTCGTGGCT                                                                                                                                 ]
[+] EMBL AK101693             [            GAGAGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    TCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCCTGATATT                                                                                                                                        ]
[+] EMBL AA750454             [              GAGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA  CCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS2649A             [               AGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGACTTGCCTCCA CAGAGGGG ATGTTTTCAAAGCACAAGCTTTGAGCATA  TT CTTGAAGGAAAATGTTG CAAGGA GGGT TCC TATTTGGGGTAC  TTTTTCTTGGGGGTGTATT TT GG GCATTGAGTA CGGAGTTGG A GAAGATTTCGTTG GTC  GCCA TTACTTGGAAG AT TC TAA TTATTTGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C74652               [                       anTGGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA  CCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT TG GCATGGAGTA C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS16486A            [                          GGATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGNCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT NG GCATGGAGTA CGGAG TGG AGGAGGA TTCG TG GTC  NGCA TGAC TGGAAGAAT GC T A TTA TTGGAGGTGTTTAAA GT GGTGCTCTG ATCTCT GNT TG CC AG  AA C AANCACA AAG  C A AGNTCC A T CA AG                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU089821             [                           GATTCATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAA                                                                                                                                                                                                     ]
[+] EMBL BI799427             [                           GATTCATCGATCGAGAA TCGA GTAG TACATACGTTGGA TTGGA TTGGAGGAGGAG AT   CTC CGGT GG TT CTC GGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGC  CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTC AAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGACC A AGAT C A TCCACAGGA CGCCATCACCGGAGGCGCTGTTG CAACCAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCACCTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCATCCCAAAAAAA                                                                                                                                                                                                  ]
[+] EMBL BI797035             [                              TCATCGATCGAGAA TCGAGCTAGTTACATAC TTGGA TTGGA TTGGAGGAGGAGAATCGCCTCGC GTGGGCTT CTC GGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGACGGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA TCGT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG CTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCTCG C TGCCC AGCCAACC AACCACC AAGA C A AGAT C A T CA AGGACCGCCATCACCGGAGGCGCTGTTG CCA CAGCTGTCGAGTTCATCCAACTACCTCACTTAGTCATGTCAACTGCATTTTTG CAGTGGCTTTTGCTTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    TCAAAAAAA                                                                                                                                                                                                ]
[+] EMBL OSC870               [                                ATCGATCGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG CTTGAA GAAAATG TG CAAGGA GGGT GCC TA TTTGGGTAC  TGTTGCT  GGGGTGTA T GTGGG GCATTGAGTACCGGAGTTGG A GAGGA TTCG TG GTC  G CA TGAC TNNGAGAAT TC TAA TGA TTTGAGGTGCTTTAA GT GGT CTCTG ATCTTT T CTTG CC NG  AA C AACCACA AAG  C A AG T C A T CA AGGN CGCa                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AT003447             [                                    gagGAGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAAAAA                                                                                                                                                                                                 ]
[+] EMBL OSC985               [                                        AGAAGTCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATN TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATNGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TTACTTNGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI799731             [                                           atTCGAGTTAG TACATACGTTGGATTTGGATTTGGAGGAGGAGAAT CCCTC C GT GG TT CTC GGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTC AAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C C AGAT C A TCCA AGGA CGCCATCACCGGAGGCGCTGTTG C A CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTC     ATCCTGCTTCGTTCCCTGCAaaaaaaaaa                                                                                                                                                                            ]
[+] EMBL OSC894               [                                             TCGAGGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG CTTGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAGTTGG A GAGGA TTCG TG GTC  GCCA TGACTTNGAAGAAT GCTT ATTGA TTNGAGGTGCTTTAA GTGGGTGCTCTG ATCTCT T C TGCCC AG CAA CAAACCACA AAGA CAA AGNT CAA T CA AGGA CGCCATt                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU163843             [                                             TCGAGGTAG  ACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCNCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATNGACGTC GCCATCGACATGGGGAA CCCNTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATCGGGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAAAAAAaaaa                                                                                                                                                                                            ]
[+] EMBL OSC981               [                                                 GGTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AG T C A T CA AGGA CGCCATCACCGG GGCGCTGTTG C                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU163899             [                                                  GTAG TACATACGTTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAA                                                                                                                                                                                                     ]
[+] EMBL BI797797             [                                                   TAG TACATAC TTGGA TTGGA TTGGAGGAGGAGAAT GCCTCGCGGTGGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAAAAAA                                                                                                                                                                                                ]
[+] EMBL BI798745             [                                                    AG TACATACGTT GA  TGGA TTGGAGGAGGAGAAT   CTCGCGTTGGT TT CTC GGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGC  CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCACCTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    CAAAAA                                                                                                                                                                                                   ]
[+] EMBL BI796962             [                                                                                             CTC CCGTGGG TT CTC GGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTC CCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACC AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCCG T TTAATAAAATGTTACCTTGTTCA    AAAAA                                                                                                                                                                                                    ]
[+] EMBL BI797276             [                                                                                                     GGT TTCCTC GGGTCGATAAGCTCG CCC AGGATCGAC TC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAA GTC CCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACACAAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCC    AAAAAAAAAa                                                                                                                                                                                               ]
[+] EMBL BI799598             [                                                                                                ctccgtGG TT CTCGGGGTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAA GTC CCGCCGAGGACACATTCGAC TGCCTCCACCAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TGCC TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAAAAAA                                                                                                                                                                                                ]
[+] EMBL BI803681             [                                                                                                         TT CTC  GGTCGATAA CTCG CCC AGGATCGAC TCGGCCATCGACATGGGGAA  CCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGC  CC TCGGGGCGT CAA GTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAGCT TTAATAAAATGTTACCTTGTTCA    TCAAAAA                                                                                                                                                                                                  ]
[+] EMBL BI799307             [                                                                                                                GGTTCGATAAGCTCG CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAA GTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCACCTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCATCCCAAAAAAAA                                                                                                                                                                                                 ]
[+] EMBL BI795068             [                                                                                                                            TCG CCCAAGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTC CCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAA                                                                                                                                                                                                    ]
[+] EMBL BI803664             [                                                                                                                            TCGCCCC AGGATCGACGTC GCCATCGACATGGGGAACCCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGCGCCCGTCGGGGCGTGCAA GTC CCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GGCGCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACC CC AAGA C ACAGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTGCCAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTCCATTTTTC CA TGCCTTTT  TTGGACAAC CA AGAATAAGAGCTTCTTCACCTGAACCCATGTCCCC TCTTAATAAAATGTTACCTTGTCCA    AAAAAAAA                                                                                                                                                                                                 ]
[+] EMBL BI799659             [                                                                                                                                CCC AGGATCGACGTC GCCATCGACATGGGGAA CCCCTTC CTCAACCGCACCGTCGACGGCTTCCTCAGAGATC GGCG CCGTCGGGGCGTGCAA GTC CCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TT CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAAAAAA                                                                                                                                                                                                 ]
[+] EMBL BI799358             [                                                                                                                                                               GAA CCCCTTCTCTCAACCGCACCGTCGACGGCTTCCTCA AGATC GGC  CCGTCGGGGCGTGCAAGTTC CC CCGAGGACACATTCGAC TGCCTCCACCAGAGGGGAATG TTTCAAAGCACAAGC TTGAGCATA  TGCC TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCAC  AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCATC  AAAAAAAAAa                                                                                                                                                                                               ]
[+] EMBL AA750431             [                                                                                                                                                                                    ACCGTCGACGGCTTCCTCA AGATC GGCG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BI305712             [                                                                                                                                                                                                                CG CCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGAC TGCCTCCA CAGAGGGG ATG TTTCAAAGCACAAGC TTGAGCATA  TG C TGAA GAAAATG TG CAAGGA GGGT GCC TA TTGGGGTAC  TGTTGCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC  GCCA TGAT TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC AG CAA C AACCACA AAGA C A AGAT C A T CA AGGA CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    TCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATCATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAACTGAGATTGAAGCTTGTATGCAATAATTACTTGATGATATTGGCGACTCATGACAGGA]
[+] EMBL BI796403             [                                                                                                                                                                                                                                                                                                     GAGCATATGTG C TGAA GAAATGG TGTCAAGGA GGGTGGCCTTATTTGGGGTACCTTGTTGCTG GGGGTTTATT TT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TGTGTCGTGCCA TGAC TGGAAGAATGGC T A TGA TTGGAGGTGCTTTAATGT GGTGCTCTG ATCTCT G C TG CCAAG C A C AACCACC AAGA C ACAGAT C AGT CA AGGAGCGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAAA                                                                                                                                                                                                     ]
[+] EMBL BI794852             [                                                                                                                                                                                                                                                                                                                                                                   cccCT  GGGGTGTA T GT GG GCATGGAGTA CGGAG TGG A GAGGA TTCG TG GTC   CCACTGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTG ATCTCT G C TG CC CA CAA C  ACC CC AAGA C C AGAT C A T CA AGGA CCCCATCACCGGAGGCCCTGTTG CCA CA CTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCACCTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    AAA                                                                                                                                                                                                      ]
[+] EMBL OS38142              [                                                                                                                                                                                                                                                                                                                                                                                 A T GT GG GCATGGAGTA CGGAG TGGAA GAGGA TTCG TG GTC  GCCA TGAC TGGAAGAAT GC T A TGA TTGGAGGTGCTTTAA GT GGTGCTCTGAATCTCT GAC TGACC AG CAA C AACCA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU225922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gccgct CGCCATCACCGGAGGCGCTGTTG CAA CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCGTTTTTG CAGTGGCTTTTG TTGGAC AG CA AGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCA    TCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCagcgg                                                                                                                                           ]
[+] EMBL BI798216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccGCGCTGTTG C A CAGCTGTCGAGTTCAT CAACTACCTCACTTAGTCATGT AACTGCATTTTTGCCAGTGGCTTTTG TTGGAC AGCCACAGAATAAGAGCTTCTTCA CTGAAGCCATGTTCAG T TTAATAAAATGTTACCTTGTTCC    AAAAAAAAAa                                                                                                                                                                                               ]


>consensus_16702#0 CATCNCCAACAAGAGAGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAGTACATA CGTTGGATTGGATTGGAGGAGGAGAATGCCTCGCGGTGGGTTCTCGGGGTCGATAAGCTC GCCCAGGATCGACGTCGCCATCGACATGGGGAACCCCTTCCTCAACCGCACCGTCGACGG CTTCCTCAAGATCGGCGCCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGACTG CCTCCACAGAGGGGATGTTTCAAAGCACAAGCTTGAGCATATGCTGAAGAAAATGTGCAA GGAGGGTGCCTATTGGGGTACTGTTGCTGGGGTGTATGTGGGCATGGAGTACGGAGTGGA GAGGATTCGTGGTCGCCATGACTGGAAGAATGCTATGATTGGAGGTGCTTTAAGTGGTGC TCTGATCTCTGCTGCCAGCAACAACCACAAAGACAAGATCATCAAGGACGCCATCACCGG AGGCGCTGTTGCAACAGCTGTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCAT TTTTGCAGTGGCTTTTGTTGGACAGCAAGAATAAGAGCTTCTTCACTGAAGCCATGTTCA GTTTAATAAAATGTTACCTTGTTCAAAAAAAAAACGTTCCCTGCACTTGTGATCTCAGTA CTTATTCTGAGTAATTATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCTTGT GATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAACTGAGATTGAAG CTTGTATGCAATAATTACTTGATGATATTGGCGACTCATGACAGGA



consensusID : consensus_16702#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence
                              [TTTCTCTGGGGTTCGATTAAGCTCCCCCAGTTCGACTCGCCATCGACATGGGAACCCCTTCCTCAACCGCACCGTCGACGGCTTCCTCAAGATC-GGCGCCGTCGGGGC-GTG--CAAGGTCCCCCCCGAGGACACATTCGACTGCCTCCCCACGAGGGGATGTTTC-CAAGCACCAAGCTTGAGCCATATGCTGAAGAAAATGTGCC-CAGGAGGGT-CCCTATTGGGGTACTGTTTGCTGGGGTGTATGTGGGCCACTGGAGTACCGGAGTGGAGAGGATTCGTGGTCGCCCACTGACCTGGAAGAATGCTATGATTGGAGGTGCTTTAAGTGGTGCTCTGATCTCTGCTGCCAGCAACAACCACCACAAGACCCAGATCATCAAGGACGCCATCACCCGGAGG-CGCTGTTGCAACAGCTGTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCATTTTTCCACGTGGCTTTTGTTGGACCAGCCCAGAATAAGAGCTTCTTCACTGAACCCATGTT-CAGTTTAATAAAATGTTACCTTGTTCATCCCCAAAAAAAAAA]

[+] EMBL BI797163             [TTTCTCTGGGGTTCGATTAAGCTCCCCCAGTTCGACTCGCCATCGACATGGGAACCCCTTCCTCAACCGCACCGTCGACGGCTTCCTCAAGATC GGCGCCGTCGGGGC GTG  CAAGGTCCCCCCCGAGGACACATTCGACTGCCTCCCCACGAGGGGATGTTTC CAAGCACCAAGCTTGAGCCATATGCTGAAGAAAATGTGCC CAGGAGGGT CCCTATTGGGGTACTGTTTGCTGGGGTGTATGTGGGCCACTGGAGTACCGGAGTGGAGAGGATTCGTGGTCGCCCACTGACCTGGAAGAATGCTATGATTGGAGGTGCTTTAAGTGGTGCTCTGATCTCTGCTGCCAGCAACAACCACCACAAGACCCAGATCATCAAGGACGCCATCACCCGGAGG CGCTGTTGCAACAGCTGTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCATTTTTCCACGTGGCTTTTGTTGGACCAGCCCAGAATAAGAGCTTCTTCACTGAACCCATGTT CAGTTTAATAAAATGTTACCTTGTTCATCCCCAAAAAAAAAA]
[+] EMBL BI799126             [                                                   aacCCCCTTCGTCAACGGCACCTTCGACGGCTTCCTCAAGATCGGGCCCCATCGGGGCAGTGCACAAGGTCCCCCCCGAGGACACATTCGACTGCCTCCCCACGAGGGGATGTTTCACAAGCACACAGCTTGAG CATATGCTGAAGAAAATGTGCCACAGGAGGGTGCCCTATTGGGGTACTG TTGCTGGGGTGTATGTGGGCC CTGGAGTACCGGAGTGGAGAGGATTCGTGGTC CCC CTGA CTGGAAGAATGCTATGATTGGAGGTGCTTTAAGTGGTGCTCTGATCTCTGCTGCCAGCAACAACC CC CAAGACACAGATCATCAAGGACGCCATCACCCGGAGGCCGATGTTGCAACAGCTGTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCATTTTTGCA GTGGCTTTTGTTGGA CAGCCCAGAATAAGAGCTTTTTCACTGAACCCATGTTCCAGTTTAATAAAATGTTACCTTGTT     CCAAAAAAAAAA]


>consensus_16702#1 TTTCTCTGGGGTTCGATTAAGCTCCCCCAGTTCGACTCGCCATCGACATGGGAACCCCTT CCTCAACCGCACCGTCGACGGCTTCCTCAAGATCGGCGCCGTCGGGGCGTGCAAGGTCCC CCCCGAGGACACATTCGACTGCCTCCCCACGAGGGGATGTTTCCAAGCACCAAGCTTGAG CCATATGCTGAAGAAAATGTGCCCAGGAGGGTCCCTATTGGGGTACTGTTTGCTGGGGTG TATGTGGGCCACTGGAGTACCGGAGTGGAGAGGATTCGTGGTCGCCCACTGACCTGGAAG AATGCTATGATTGGAGGTGCTTTAAGTGGTGCTCTGATCTCTGCTGCCAGCAACAACCAC CACAAGACCCAGATCATCAAGGACGCCATCACCCGGAGGCGCTGTTGCAACAGCTGTCGA GTTCATCAACTACCTCACTTAGTCATGTAACTGCATTTTTCCACGTGGCTTTTGTTGGAC CAGCCCAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTACCTTG TTCATCCCCAAAAAAAAAA



consensusID : consensus_16702#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence
                              [AACATGGTTCCTTGGGGGTTATTAATTGTGGCGCCAATTGGGAATGTCAACGGGATGTGGGAGAAGAATTCCGTGGTGTCAGCCAATGGACTGGAAGAATGGCTAATGGATTGGGAGGGTGGCTTTAAGTGGGTGGCTGCTGGATGCTCTGGCTGGCCAGCAACAACCCCAAAGACAAGATGCATCCAAGGACGCCATGCACCGGAGGCGCTGGTTGGCAACAGCTGGTGCGAGTTGCATGCAACCTGACCTGCACTTGAGTGCATGGTGAACTGGCATTTGTTCGCACGTGGGCTTTTGTTGGACAGCAAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTACCTGGTTCATCCCCTGCTTCGTTAAAAAAAAAA]

[+] EMBL BI799642             [AACATGGTTCCTTGGGGGTTATTAATTGTGGCGCCAATTGGGAATGTCAACGGGATGTGGGAGAAGAATTCCGTGGTGTCAGCCAATGGACTGGAAGAATGGCTAATGGATTGGGAGGGTGGCTTTAAGTGGGTGGCTGCTGGATGCTCTGGCTGGCCAGCAACAACCCCAAAGACAAGATGCATCCAAGGACGCCATGCACCGGAGGCGCTGGTTGGCAACAGCTGGTGCGAGTTGCATGCAACCTGACCTGCACTTGAGTGCATGGTGAACTGGCATTTGTTCGCACGTGGGCTTTTGTTGGACAGCAAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTACCTGGTTCATCCCCTGCTTCGTTAAAAAAAAAA]


>consensus_16702#2 AACATGGTTCCTTGGGGGTTATTAATTGTGGCGCCAATTGGGAATGTCAACGGGATGTGG GAGAAGAATTCCGTGGTGTCAGCCAATGGACTGGAAGAATGGCTAATGGATTGGGAGGGT GGCTTTAAGTGGGTGGCTGCTGGATGCTCTGGCTGGCCAGCAACAACCCCAAAGACAAGA TGCATCCAAGGACGCCATGCACCGGAGGCGCTGGTTGGCAACAGCTGGTGCGAGTTGCAT GCAACCTGACCTGCACTTGAGTGCATGGTGAACTGGCATTTGTTCGCACGTGGGCTTTTG TTGGACAGCAAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTAC CTGGTTCATCCCCTGCTTCGTTAAAAAAAAAA



consensusID : consensus_16702#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 371
fasta sequence
                              [CCAGGCAAANCATCCCTCAAAAGATCAAAGATTCATTCAAAGGACTGCNCATTCACCCGGAGGCGCTGTTTGCAACAGCTGNTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCGTTTTTGCAGTGGCTTTTGTTGGACAGCAAGAACTAAGAGCTTCTTCACTGAAGCCATGTTCAGTTTAATAAAATGTTACCTTGTTCATCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU097160             [CCAGGCAAANCATCCCTCAAAAGATCAAAGATTCATTCAAAGGACTGCNCATTCACCCGGAGGCGCTGTTTGCAACAGCTGNTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGCGTTTTTGCAGTGGCTTTTGTTGGACAGCAAGAACTAAGAGCTTCTTCACTGAAGCCATGTTCAGTTTAATAAAATGTTACCTTGTTCATCCCTGCTTCGTTCCCTGCACTTGTGATCTCAGTACTTATTCTGAGTAATTATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAAAAAAAAAAAAAAAAAAAAAA]


>consensus_16702#3 CCAGGCAAANCATCCCTCAAAAGATCAAAGATTCATTCAAAGGACTGCNCATTCACCCGG AGGCGCTGTTTGCAACAGCTGNTCGAGTTCATCAACTACCTCACTTAGTCATGTAACTGC GTTTTTGCAGTGGCTTTTGTTGGACAGCAAGAACTAAGAGCTTCTTCACTGAAGCCATGT TCAGTTTAATAAAATGTTACCTTGTTCATCCCTGCTTCGTTCCCTGCACTTGTGATCTCA GTACTTATTCTGAGTAATTATTCTCCTGATATTCGTGGCTTGCAGTCGTCAGTATGACCT TGTGATGATTTGTTTTAAGTTGAGAAAAGCCATATTTGCAAGTTGCAGCAAAAAAAAAAA AAAAAAAAAAA



consensusID : consensus_16702#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 338
fasta sequence
                              [TAGCACAAGTATCATCCAAGGTACGCCATCACCGGAGGCGCTGTTCCAAACACTGTCAGAGTTCATCAAACTACCTCACTTAGTCATGTAACTGCCATTTTTCCAGTGGCTTTTGTTGGACAACCAAGAATAAGAGCTTCTTCACTGAACCATGTTCACGTTTAATAAAATGGTTACCTTGTTCATCCCTGCTTCGTTCCCTGCCACCTTGTGATCCCAAGTACTTATTCTGAGTAAATCATTCTCCTGGATATTCGTGGCTTCCAGTCGCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAACCCATATTTGCCAAGTTCCAAAAAAAAAA]

[+] EMBL BI798701             [TAGCACAAGTATCATCCAAGGTACGCCATCACCGGAGGCGCTGTTCCAAACACTGTCAGAGTTCATCAAACTACCTCACTTAGTCATGTAACTGCCATTTTTCCAGTGGCTTTTGTTGGACAACCAAGAATAAGAGCTTCTTCACTGAACCATGTTCACGTTTAATAAAATGGTTACCTTGTTCATCCCTGCTTCGTTCCCTGCCACCTTGTGATCCCAAGTACTTATTCTGAGTAAATCATTCTCCTGGATATTCGTGGCTTCCAGTCGCAGTATGACCTTGTGATGATTTGTTTTAAGTTGAGAAAACCCATATTTGCCAAGTTCCAAAAAAAAAA]


>consensus_16702#4 TAGCACAAGTATCATCCAAGGTACGCCATCACCGGAGGCGCTGTTCCAAACACTGTCAGA GTTCATCAAACTACCTCACTTAGTCATGTAACTGCCATTTTTCCAGTGGCTTTTGTTGGA CAACCAAGAATAAGAGCTTCTTCACTGAACCATGTTCACGTTTAATAAAATGGTTACCTT GTTCATCCCTGCTTCGTTCCCTGCCACCTTGTGATCCCAAGTACTTATTCTGAGTAAATC ATTCTCCTGGATATTCGTGGCTTCCAGTCGCAGTATGACCTTGTGATGATTTGTTTTAAG TTGAGAAAACCCATATTTGCCAAGTTCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      CATCNCCAACAAGAGAGAGGAGGAGTGGATTCATCGATCGAGAAGTCGAGGTAGTACATA 60
consensus_16702#1      ------------------------------------------------------------
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      CGTTGGATTGGATTGGAGGAGGAGAATGCCTCGCGGTGGGTTCTCGGGGTCGATAAGCTC 120
consensus_16702#1      ------------------------------------------------------------
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      GCCCAGGATCGACGTCGCCATCGACATGGGGAACCCCTTCCTCAACCGCACCGTCGACGG 180
consensus_16702#1      ------------------------------------------------------------
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      CTTCCTCAAGATCGGCGCCGTCGGGGCGTGCAAGGTCGCCGCCGAGGACACATTCGACTG 240
consensus_16702#1      -----------------------------TTTCTCTGGGGTTCGATTAAGCTCCCCCAGT 31
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      CCTCCACAGAGGGGATGTTTCAAAGCACAAGCTTGAGCATATGCTGAAGAAAATGTGCAA 300
consensus_16702#1      TCGACTCGCCATCGACATGGGAACCCCTTCCTCAACCGCACCGTCGACGGCTTCCTCAAG 91
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      GGAGGGTGCCTATTGGGGTACTGTTGCTGGGGTGTATGTGGGCATGGAGTACGGAGTGGA 360
consensus_16702#1      ATCGGCGCCGTCGGGGCGTGCAAGGTCCCCCCCGAGGACACATTCGACTGCCTCCCCACG 151
consensus_16702#2      ------------------------------------------------------------
                                                                                   

consensus_16702#3      ------------------------------------------------------------
consensus_16702#4      ------------------------------------------------------------
consensus_16702#0      GAGGATTCGTGGTCGCCATGACTGGAAGAATGCTATGATTGGAGGTGCTTTAAGTGGTGC 420
consensus_16702#1      AGGGGATGTTTCCAAGCACCAAGCTTGAGCCATATGCTGAAGAAAATGTGCCCAGGAGGG 211
consensus_16702#2      -----------------------------------------------------AACATGG 7
                                                                                   

consensus_16702#3      --CCAGGCAAANCATCCCTCAAAAGATCAAAGATTCATTCAAAGGACTGCNCATTCACCC 58
consensus_16702#4      ----------------------TAGCACAAGTAT-CATCCAAGG---TACGCCATCACC- 33
consensus_16702#0      TCTGATCTCTGCTGCCAGCAACAACCACAAAGACAAGATCATCAAG-GACGCCATCACC- 478
consensus_16702#1      TCCCTATTGGGGTACTGTTTGCTGGGGTGTATGTGGGCCACTGGAGTACCGGAGTGGAGA 271
consensus_16702#2      TTCCTTGGGGGTTATTAATTG-TGGCGCCAATTGGGAATGTCAACGGGATGTGGGAGAAG 66
                                                                                   

consensus_16702#3      GGAGGCGCTGTTTGCAACAGCTGNTCGAGTTCAT--CAA-CTACCTCACTTAGTC-ATGT 114
consensus_16702#4      GGAGGCGCTGTTCCAAACA-CTGTCAGAGTTCAT--CAAACTACCTCACTTAGTC-ATGT 89
consensus_16702#0      GGAGGCGCTGTT-GCAACAGCTGTC-GAGTTCAT--CAA-CTACCTCACTTAGTC-ATGT 532
consensus_16702#1      GGATTCGTGGT--CGCCCACTGACCTGGAAGAATG-CTAT--GATTGGAGGTG---CTTT 323
consensus_16702#2      AATTCCGTGGTGTCAGCCAATGGACTGGAAGAATGGCTAATGGATTGGGAGGGTGGCTTT 126
                            **  **      **       *     **  * *      *      *    * *

consensus_16702#3      AACTGC-GTTTTTGCAGTGGCTTTTGTTGGACAGCAAGAACTAAGAGCTTCTTCACTGAA 173
consensus_16702#4      AACTGCCATTTTTCCAGTGGCTTTTGTTGGACAACCAAGAATAAGAGCTTCTTCACTGAA 149
consensus_16702#0      AACTGC-ATTTTTGCAGTGGCTTTTGTTGGACAGCAAGAA-TAAGAGCTTCTTCACTGAA 590
consensus_16702#1      AAGTGGTGCTCTGATCTCTGCT---GCCAGC-AACAACCACCACAAG--ACCCAGAT-CA 376
consensus_16702#2      AAGTGGGTGGCTGCTGGATGCTCTGGCTGGCCAGCAACAACCCCAAA--GACAAGATGCA 184
                       ** **      *       ***   *   *  * * *  *     *          *  *

consensus_16702#3      GCCATGTTCA-GTTTAATAAAATG-TTACCTTGTTCATCCCTGCTTCG--TTCCCTGCA- 228
consensus_16702#4      -CCATGTTCACGTTTAATAAAATGGTTACCTTGTTCATCCCTGCTTCG--TTCCCTGCCA 206
consensus_16702#0      GCCATGTTCA-GTTTAATAAAATG-TTACCTTGTTCAAAAAAAAAACG--TTCCCTGCA- 645
consensus_16702#1      TC-AAGGACGCCATCACCCGGAGGCGCTGTT--GCAACAGCTGT--CGAGTT-CAT-CAA 429
consensus_16702#2      TCCAAGGACGCCATGCACCGGAGGCGCTGGTTGGCAACAGCTGGTGCGAGTTGCATGCAA 244
                        * * *  *    *       * *      *     *         **  ** * * *  

consensus_16702#3      -CTTGTGATCTCA-GTACTTATTCTGAGTAA----TTATTCTCCTG-ATATTCGTGGCTT 281
consensus_16702#4      CCTTGTGATCCCAAGTACTTATTCTGAGTAAA---TCATTCTCCTGGATATTCGTGGCTT 263
consensus_16702#0      -CTTGTGATCTCA-GTACTTATTCTGAGTAA----TTATTCTCCTG-ATATTCGTGGCTT 698
consensus_16702#1      CT--ACCT-CACTTAGTCATGT----AACTG-CATTTTTCCACGTG---GCTTTTGTTGG 478
consensus_16702#2      CCTGACCTGCACTTGAGTGCATGGTGAACTGGCATTTGTTCGCACGTGGGCTTTTGTTGG 304
                                * *         *    *        *  * * *  *     *  **    

consensus_16702#3      GCAG-TCGTCAGTATGACCTTGT--GATGA-TTTGTTTTAAGTTGAGAAAAGCCATATTT 337
consensus_16702#4      CCAG-TCG-CAGTATGACCTTGT--GATGA-TTTGTTTTAAGTTGAGAAAACCCATATTT 318
consensus_16702#0      GCAG-TCGTCAGTATGACCTTGT--GATGA-TTTGTTTTAAGTTGAGAAAAGCCATATTT 754
consensus_16702#1      ACCAGCCCAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTACCT 538
consensus_16702#2      ACAG--CAAGAATAAGAGCTTCTTCACTGAACCCATGTTCAGTTTAATAAAATGTTACCT 362
                        *    *   * ** ** *** *    ***     * ** **** *  ***    **  *

consensus_16702#3      GC-AAGTTGCA------GCAAAAAAAAAAAAAAAAAAAAAA------------------- 371
consensus_16702#4      GCCAAGTTCCA------AAAAAAAAA---------------------------------- 338
consensus_16702#0      GC-AAGTTGCA------GCAACTGAGATTGAAGCTTGTATGCAATAATTACTTGATGATA 807
consensus_16702#1      TGTTCATCCCC---------AAAAAAAAAA------------------------------ 559
consensus_16702#2      GGTTCATCCCCTGCTTCGTTAAAAAAAAAA------------------------------ 392
                             *  *          *   *                                   

consensus_16702#3      -------------------
consensus_16702#4      -------------------
consensus_16702#0      TTGGCGACTCATGACAGGA 826
consensus_16702#1      -------------------
consensus_16702#2      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)