cluster # 1672

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Oryza sativa
cluster # 1672 cluster # 1672 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1672#0 length = 1142 sequences # 2

consensusID : consensus_1672#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1142
fasta sequence

                              [CGTCGTCGTCGTCGTTGTCGGAGTCGCCATGTCGTCGGCGGCGCGCCACCATTGCTCCGGTCTCCGGGAGCGGCTAGGCTGCGTGCAGTGCAGCTTCTGCGCCACCGTGTTGCTGGTGAGCGTGCCGTGCAGCAGCGTGCTCAGGGTGGTGGCCGTGCAGTGCGGCCACTGCTCCGGCATCCTCTCCGCCGTCAACCTGCCGCCGTCGCCGGTGTCGGCGTCCATCGAGCTGACTCCACAGGTATGATTCTTTTCAGCTTCAGTTGATGAAAATGATTGGATGATGTGCAGAATCTGTACTAACCTGACGAGATGAAACAGGAGCTGGACGCTGGTCCGCCGCCGGGGGAGTACTCGGATGAGAGCAGCGGAGACGATAGGGAGGGAAGAGATGCAGAGGACGATGCACCTGCACCTGCTGCTGCTGCTGTTGCAAACAAGCGTACTTGTCCTGCTGTTTTCTCTTGATCAGTTTGTCTGAAGATGATAATGACGATCATGATGGGCTAATTAAGCATGTTCTTGAAACATTTCTGCAGCGCCAGGGAGGAAGCAGCGGACGCCGTCTGCCTACAACTGTTTCGTCAAGTAATAGCCCAGAAAAACAAAATGAGTATATACTGTGATCATAGCTAGACTGAGGGCCAATTGCAGAGCATCACCTAGAGCATACATGGCTCTGAATATTCTTATATAAATGTCCCCCCTCGATATTCAGGTGAGACTTGAGAGGTGATGGAAGTATTAACATTCCTTTTTGTTGTCAGGGAAGAGATAAAGAGGATCGAAAGCATGGAGCCTAACATCACCCACAAACAAGCATTCAGCACAGCTGCTAAAAACTGGGCTCACTTACCCAGAATCCAGCAGAAGCGAGGCAGGGATAGCTGCTGAACTACACCTGCAAAACAAGGCAAACGAAATTAATGGGCACGAGTACCAGGCAGCAGTGAGCTACTAGGCAGGTTCAGGAAAAATCCAAGTTGTAGCTGTCCAGATAATCTTGTTGCACATCTCAAGCACGTGCTTCCTGAATTCTTCTCTTTCATGTGATAAATACAGCAAGTTTTTTTTTTCGACTACTCGGTTCTTAACCAACCTGATGAATCTAATAAGTTTGCCAGCATACACCTTTGAGCGGC]

[+] EMBL AK072618             [CGTCGTCGTCGTCGTTGTCGGAGTCGCCATGTCGTCGGCGGCGCGCCACCATTGCTCCGGTCTCCGGGAGCGGCTAGGCTGCGTGCAGTGCAGCTTCTGCGCCACCGTGTTGCTGGTGAGCGTGCCGTGCAGCAGCGTGCTCAGGGTGGTGGCCGTGCAGTGCGGCCACTGCTCCGGCATCCTCTCCGCCGTCAACCTGCCGCCGTCGCCGGTGTCGGCGTCCATCGAGCTGACTCCACAGGTATGATTCTTTTCAGCTTCAGTTGATGAAAATGATTGGATGATGTGCAGAATCTGTACTAACCTGACGAGATGAAACAGGAGCTGGACGCTGGTCCGCCGCCGGGGGAGTACTCGGATGAGAGCAGCGGAGACGATAGGGAGGGAAGAGATGCAGAGGACGATGCACCTGCACCTGCTGCTGCTGCTGTTGCAAACAAGCGTACTTGTCCTGCTGTTTTCTCTTGATCAGTTTGTCTGAAGATGATAATGACGATCATGATGGGCTAATTAAGCATGTTCTTGAAACATTTCTGCAGCGCCAGGGAGGAAGCAGCGGACGCCGTCTGCCTACAACTGTTTCGTCAAGTAATAGCCCAGAAAAACAAAATGAGTATATACTGTGATCATAGCTAGACTGAGGGCCAATTGCAGAGCATCACCTAGAGCATACATGGCTCTGAATATTCTTATATAAATGTCCCCCCTCGATATTCAGGTGAGACTTGAGAGGTGATGGAAGTATTAACATTCCTTTTTGTTGTCAGGGAAGAGATAAAGAGGATCGAAAGCATGGAGCCTAACATCACCCACAAACAAGCATTCAGCACAGCTGCTAAAAACTGGGCTCACTTACCCAGAATCCAGCAGAAGCGAGGCAGGGATAGCTGCTGAACTACACCTGCAAAACAAGGCAAACGAAATTAATGGGCACGAGTACCAGGCAGCAGTGAGCTACTAGGCAGGTTCAGGAAAAATCCAAGTTGTAGCTGTCCAGATAATCTTGTTGCACATCTCAAGCACGTGCTTCCTGAATTCTTCTCTTTCATGTGATAAATACAGCAAGTTTTTTTTTTCGACTACTCG                                                        ]
[-] EMBL AU225891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgctAAAGCATGGAGCCTAACATCACCCACAAACAAGCATTCAGCACAGCTGCTAAAAACTGGGCTCACTTACCCAGAATCCAGCAGAAGAGAGGCAGGGATAGCTGCTGAACTACACCTGCAAAACAAGGCAAACGAAATTAATGGGCACGAGTACCAGGCAGCAGTGAGCTACTAGGCAGGTTCAGGAAAAATCCAAGTTGTAGCTGTCCAGATAATCTTGTTGCACATCTCAAGCACGTGCTTCCTGAATTCTTCTCTTTCATGTGATAAATACAGCAAG TTTTTTTTTCGACTACTCGGTTCTTAACCAACCTGATGAATCTAATAAGTTTGCCAGCATACACCTTTGAGCGGC]




>consensus_1672#0
CGTCGTCGTCGTCGTTGTCGGAGTCGCCATGTCGTCGGCGGCGCGCCACCATTGCTCCGG
TCTCCGGGAGCGGCTAGGCTGCGTGCAGTGCAGCTTCTGCGCCACCGTGTTGCTGGTGAG
CGTGCCGTGCAGCAGCGTGCTCAGGGTGGTGGCCGTGCAGTGCGGCCACTGCTCCGGCAT
CCTCTCCGCCGTCAACCTGCCGCCGTCGCCGGTGTCGGCGTCCATCGAGCTGACTCCACA
GGTATGATTCTTTTCAGCTTCAGTTGATGAAAATGATTGGATGATGTGCAGAATCTGTAC
TAACCTGACGAGATGAAACAGGAGCTGGACGCTGGTCCGCCGCCGGGGGAGTACTCGGAT
GAGAGCAGCGGAGACGATAGGGAGGGAAGAGATGCAGAGGACGATGCACCTGCACCTGCT
GCTGCTGCTGTTGCAAACAAGCGTACTTGTCCTGCTGTTTTCTCTTGATCAGTTTGTCTG
AAGATGATAATGACGATCATGATGGGCTAATTAAGCATGTTCTTGAAACATTTCTGCAGC
GCCAGGGAGGAAGCAGCGGACGCCGTCTGCCTACAACTGTTTCGTCAAGTAATAGCCCAG
AAAAACAAAATGAGTATATACTGTGATCATAGCTAGACTGAGGGCCAATTGCAGAGCATC
ACCTAGAGCATACATGGCTCTGAATATTCTTATATAAATGTCCCCCCTCGATATTCAGGT
GAGACTTGAGAGGTGATGGAAGTATTAACATTCCTTTTTGTTGTCAGGGAAGAGATAAAG
AGGATCGAAAGCATGGAGCCTAACATCACCCACAAACAAGCATTCAGCACAGCTGCTAAA
AACTGGGCTCACTTACCCAGAATCCAGCAGAAGCGAGGCAGGGATAGCTGCTGAACTACA
CCTGCAAAACAAGGCAAACGAAATTAATGGGCACGAGTACCAGGCAGCAGTGAGCTACTA
GGCAGGTTCAGGAAAAATCCAAGTTGTAGCTGTCCAGATAATCTTGTTGCACATCTCAAG
CACGTGCTTCCTGAATTCTTCTCTTTCATGTGATAAATACAGCAAGTTTTTTTTTTCGAC
TACTCGGTTCTTAACCAACCTGATGAATCTAATAAGTTTGCCAGCATACACCTTTGAGCG
GC

clustalw multiple alignements is not computed in this case