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Oryza sativa
cluster # 168 cluster # 168       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_168#0 length = 1247 sequences # 2  

consensusID : consensus_168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1247
fasta sequence
                              [AAATGACGAGACTACCCCTCCTCCTCCACTCGCCCCGCTTCGCCGCCGCACTGACCACGCCGCCGCCGCCGCCGCTGCCACCGGCGCGCCGCCTCGTCGCCGCCGCTGCAGGAGGAGACCTATCGCTCGCGATGTCGGCGGCAACCGGGGAGTACCCGGTCCCGGTCTCCCCTCCCTACCCGGCGGCGTCCAAGGACGTGGAGCTCCGGCGCGCCATGACGGCCTCGGCGCGCTCCGCCGCCTACTCCTCCGCGCCCGTCGTGTTCGAGGACGAGTGGCTCGCCGTCGTCGACAAGCCCGCGGGAGTCTACTGCGACGCCCTCCTCTCCGCTCTCCCTTGCTCCGCTGCCACATTAGGGGATGAAGCAACTAAACCTAACCTTCACCTCGCCAACAGGCTAGACCGTGATACCAGTGGGCTCATGGTTATTACCAAATGCAATAAGGTTGCTGGGAAGCTAGTGAAGGCGTTTACAGAGCACAAAGTTAAGAAAACATATCTAGCTCTTTGCATAGGTTACCCACCAGCATGGGAGAAGATTAAGATATGCTCTGGCCATGGTCGATCAAAACATGGTGCTTGGCGTGTGTACGCTATGTCTGATGTTGGACGATCACTACCAGGGGGTTCCGTTGTACGCGACATGAGTACACGATTTGAAGTTCTGGGAATCAATGGCAAGGGACAGTTTAGAGAACCATCTAATTTTGAAGTTGATGAAACAGAGTCTATTACCGTACAAGAGAAGGCAGCTGACCTGACTTCAGATGGTGATGAGAAGAACAGCATAATTTTGGTTAGAGCCTATCCTCAGAGTGGACGAACACATCAGATTCGTCTGCACTGTCAGTATCTTGGGTTCCCTATCAGAGGTGATGTGAAGTACAGCGGAGTTATTGAGTGGAATGGTGTGGATTATGATGGCCATGCATTGCATGCTGAGAGCTTGTCATTTGTACACCCAGTCACTGGATTGCCAGTCACCTTCCGGTCACCTCTCCCTTCATGGGCGAATGAATTTATTTCGACGATGGCATAAGTTCTTTCAACGTTATTATGAACTTGTGGATGCATTGCCTCCCAATTGATGCTGATTTTTTATTTTTTAACCAAGAGCACATCCCTAAACTGTCGAAAGCAACTCTTGGAGCTATCTTCGGGGAGAAGTATTGGTCAGTGCCCAGTTGTCATATAACAATCTCCTCCAGCAAAACAGTGCCTTCTTGGTCGTTGTTCGTGGATATCA]

[+] EMBL AK061524             [AAATGACGAGACTACCCCTCCTCCTCCACTCGCCCCGCTTCGCCGCCGCACTGACCACGCCGCCGCCGCCGCCGCTGCCACCGGCGCGCCGCCTCGTCGCCGCCGCTGCAGGAGGAGACCTATCGCTCGCGATGTCGGCGGCAACCGGGGAGTACCCGGTCCCGGTCTCCCCTCCCTACCCGGCGGCGTCCAAGGACGTGGAGCTCCGGCGCGCCATGACGGCCTCGGCGCGCTCCGCCGCCTACTCCTCCGCGCCCGTCGTGTTCGAGGACGAGTGGCTCGCCGTCGTCGACAAGCCCGCGGGAGTCTACTGCGACGCCCTCCTCTCCGCTCTCCCTTGCTCCGCTGCCACATTAGGGGATGAAGCAACTAAACCTAACCTTCACCTCGCCAACAGGCTAGACCGTGATACCAGTGGGCTCATGGTTATTACCAAATGCAATAAGGTTGCTGGGAAGCTAGTGAAGGCGTTTACAGAGCACAAAGTTAAGAAAACATATCTAGCTCTTTGCATAGGTTACCCACCAGCATGGGAGAAGATTAAGATATGCTCTGGCCATGGTCGATCAAAACATGGTGCTTGGCGTGTGTACGCTATGTCTGATGTTGGACGATCACTACCAGGGGGTTCCGTTGTACGCGACATGAGTACACGATTTGAAGTTCTGGGAATCAATGGCAAGGGACAGTTTAGAGAACCATCTAATTTTGAAGTTGATGAAACAGAGTCTATTACCGTACAAGAGAAGGCAGCTGACCTGACTTCAGATGGTGATGAGAAGAACAGCATAATTTTGGTTAGAGCCTATCCTCAGAGTGGACGAACACATCAGATTCGTCTGCACTGTCAGTATCTTGGGTTCCCTATCAGAGGTGATGTGAAGTACAGCGGAGTTATTGAGTGGAATGGTGTGGATTATGATGGCCATGCATTGCATGCTGAGAGCTTGTCATTTGTACACCCAGTCACTGGATTGCCAGTCACCTTCCGGTCACCTCTCCCTTCATGGGCGAATGAATTTATTTCGACGATGGCATAAGTTCTTTCAACGTTATTATGAACTTGTGGATGCATTGCCTCCCAATTGATGCTGATTTTTTATTTTTTAACCAAGAGCACATCCCTAAACTGTCGAAAGCAACTCTTGGAGCTATCTTCGGGGAGAAGTATTGGTCAGTGCCCAGTTGTCATATAACAATCTCCTCCAGCAAAACAGTGCCTTCTTGGTCGTTGTTCGTGGA     ]
[+] EMBL AK102334             [                     TCCTCCACTCGCCCCGCTTCGCCGCCGCACTGACCACGCCGCCGCCGCCGCCGCTGCCACCGGCGCGCCGCCTCGTCGCCGCCGCTGCAGGAGGAGACCTATCGCTCGCGATGTCGGCGGCAACCGGGGAGTACCCGGTCCCGGTCTCCCCTCCCTACCCGGCGGCGTCCAAGGACGTGGAGCTCCGGCGCGCCATGACGGCCTCGGCGCGCTCCGCCGCCTACTCCTCCGCGCCCGTCGTGTTCGAGGACGAGTGGCTCGCCGTCGTCGACAAGCCCGCGGGAGTCTACTGCGACGCCCTCCTCTCCGCTCTCCCTTGCTCCGCTGCCACATTAGGGGATGAAGCAACTAAACCTAACCTTCACCTCGCCAACAGGCTAGACCGTGATACCAGTGGGCTCATGGTTATTACCAAATGCAATAAGGTTGCTGGGAAGCTAGTGAAGGCGTTTACAGAGCACAAAGTTAAGAAAACATATCTAGCTCTTTGCATAGGTTACCCACCAGCATGGGAGAAGATTAAGATATGCTCTGGCCATGGTCGATCAAAACATGGTGCTTGGCGTGTGTACGCTATGTCTGATGTTGGACGATCACTACCAGGGGGTTCCGTTGTACGCGACATGAGTACACGATTTGAAGTTCTGGGAATCAATGGCAAGGGACAGTTTAGAGAACCATCTAATTTTGAAGTTGATGAAACAGAGTCTATTACCGTACAAGAGAAGGCAGCTGACCTGACTTCAGATGGTGATGAGAAGAACAGCATAATTTTGGTTAGAGCCTATCCTCAGAGTGGACGAACACATCAGATTCGTCTGCACTGTCAGTATCTTGGGTTCCCTATCAGAGGTGATGTGAAGTACAGCGGAGTTATTGAGTGGAATGGTGTGGATTATGATGGCCATGCATTGCATGCTGAGAGCTTGTCATTTGTACACCCAGTCACTGGATTGCCAGTCACCTTCCGGTCACCTCTCCCTTCATGGGCGAATGAATTTATTTCGACGATGGCATAAGTTCTTTCAACGTTATTATGAACTTGTGGATGCATTGCCTCCCAATTGATGCTGATTTTTTATTTTTTAACCAAGAGCACATCCCTAAACTGTCGAAAGCAACTCTTGGAGCTATCTTCGGGGAGAAGTATTGGTCAGTGCCCAGTTGTCATATAACAATCTCCTCCAGCAAAACAGTGCCTTCTTGGTCGTTGTTCGTGGATATCA]


>consensus_168#0 AAATGACGAGACTACCCCTCCTCCTCCACTCGCCCCGCTTCGCCGCCGCACTGACCACGC CGCCGCCGCCGCCGCTGCCACCGGCGCGCCGCCTCGTCGCCGCCGCTGCAGGAGGAGACC TATCGCTCGCGATGTCGGCGGCAACCGGGGAGTACCCGGTCCCGGTCTCCCCTCCCTACC CGGCGGCGTCCAAGGACGTGGAGCTCCGGCGCGCCATGACGGCCTCGGCGCGCTCCGCCG CCTACTCCTCCGCGCCCGTCGTGTTCGAGGACGAGTGGCTCGCCGTCGTCGACAAGCCCG CGGGAGTCTACTGCGACGCCCTCCTCTCCGCTCTCCCTTGCTCCGCTGCCACATTAGGGG ATGAAGCAACTAAACCTAACCTTCACCTCGCCAACAGGCTAGACCGTGATACCAGTGGGC TCATGGTTATTACCAAATGCAATAAGGTTGCTGGGAAGCTAGTGAAGGCGTTTACAGAGC ACAAAGTTAAGAAAACATATCTAGCTCTTTGCATAGGTTACCCACCAGCATGGGAGAAGA TTAAGATATGCTCTGGCCATGGTCGATCAAAACATGGTGCTTGGCGTGTGTACGCTATGT CTGATGTTGGACGATCACTACCAGGGGGTTCCGTTGTACGCGACATGAGTACACGATTTG AAGTTCTGGGAATCAATGGCAAGGGACAGTTTAGAGAACCATCTAATTTTGAAGTTGATG AAACAGAGTCTATTACCGTACAAGAGAAGGCAGCTGACCTGACTTCAGATGGTGATGAGA AGAACAGCATAATTTTGGTTAGAGCCTATCCTCAGAGTGGACGAACACATCAGATTCGTC TGCACTGTCAGTATCTTGGGTTCCCTATCAGAGGTGATGTGAAGTACAGCGGAGTTATTG AGTGGAATGGTGTGGATTATGATGGCCATGCATTGCATGCTGAGAGCTTGTCATTTGTAC ACCCAGTCACTGGATTGCCAGTCACCTTCCGGTCACCTCTCCCTTCATGGGCGAATGAAT TTATTTCGACGATGGCATAAGTTCTTTCAACGTTATTATGAACTTGTGGATGCATTGCCT CCCAATTGATGCTGATTTTTTATTTTTTAACCAAGAGCACATCCCTAAACTGTCGAAAGC AACTCTTGGAGCTATCTTCGGGGAGAAGTATTGGTCAGTGCCCAGTTGTCATATAACAAT CTCCTCCAGCAAAACAGTGCCTTCTTGGTCGTTGTTCGTGGATATCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)