cluster # 1692

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Oryza sativa
cluster # 1692 cluster # 1692 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1692#0 length = 623 sequences # 2

consensusID : consensus_1692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 623
fasta sequence

                              [CTTTTGTAAAANCCGACGGCCCATTGACCCCCCGTAATACGACTCCACCTATTAGGNCCGAATTGGNTACCGGCCCCCCCTCGAGNTCGACCCCACGCTTCCGCCCCAAAGAGGCCAAAGAGCAAGCTTTCAAGGGCCCGGTTTAGACAGAAGAAATTTGAAGGATCAGAGTGACCCCGAGATAGAACATGAAGGATGAAGTTGGCTATTATCCCCAAAAGATTTTTTTAGTGATTTAGACTAGAAAGTGAATGAAATTGAAAGTGTACCCCTAATAATAACTATAACCTGAGGACGGGAGCCNTCCGGAGGTGTTCCAGTGCGAAATCAGCCCTAGGTACAAGCGCTTCTGTTTCATTGGTCACGTTCCGTTTGCAGGTTTCAAGCCCGATCTGGAGGTTTAATTGGTGTGGCTAGTGCTCAACAAT-CGCTGCTGAAAGCAGTTAAGGTATNCNC-AAGAGGGGAGTCCAGAACTTCTGGAGTAACTGGGCGGTCCTTGTTACGGTCACAAAATATGTTTGGAGAATAGCTGCTATATATGTCTCTGTTTTTTTTTTTTTTTTTGGATCGATCTGCTGTTTTCGCAAGCGGATGGTGTAAAAATCTGCTGCTTTTGCAAAAAA]

[+] EMBL AU031780             [CTTTTGTAAAANCCGACGGCCCATTGACCCCCCGTAATACGACTCCACCTATTAGGNCCGAATTGGNTACCGGCCCCCCCTCGAGNTCGACCCCACGCTTCCGCCCCAAAGAGGCCAAAGAGCAAGCTTTCAAGGGCCCGGTTTAGACAGAAGAAATTTGAAGGATCAGAGTGACCCCGAGATAGAACATGAAGGATGAAGTTGGCTATTATCCCCAAAAGATTTTTTTAGTGATTTAGACTAGAAAGTGAATGAAATTGAAAGTGTACCCCTAATAATAACTATAACCTGAGGACGGGAGCCNTCCGGAGGTGTTCCAGTGCGAAATCAGCCCTAGGTACAAGCGCTTCTGTTTCATTGGTCACGTTCCGTTTGCAGGTTTCAAGCCCGATCTGGAGGTTTAATTGGTGTGGCTAGTGCTCAACAAT CGCTGCTGAAAGCAGTTAAGGTATNCNC AAGAGGGGAGTCCAGAACTTCTGGAGTAACTGGGCGGTCCTTGTTACGGTCACAAAATATGTTTGGAGAATAGCTGCTATATATGTCTCTGTTTTTTTTTTTTTTTTTGGATCGATCTGCTGTTTTCGCAAGCGGATGGTGTAAAAATCTGCTGCTTTTGCAAAAAA]
[+] EMBL OSR16871A            [                                                                                                                 ggCAAAGAGCAAGCTTTCAAGGG CCGGTTTAGACAGAAGAAATTTGAAGGATCAGAGTGACGCCGAGATAGAACATGAAGGATGAAGTTGGCTATTAT CCCAAAAGATTTTTTTAGTGATTTAGACTAGAAAGTGAATGAAATTGAAAGTGTACCCCTAATAAT ACTATAACCTGAGGACGGGAGCCGT CGGAGGTGTT CAGTGCGAAATCAG CCTAGGTACAAGCGCTTCTGTTTCATTGGTCACGTTCCGTTTGCAGGTTTCAAG CCGATCTGGAGGTTTAATTGGTGTGGCTAGTGCTCAACAATACGCTGCTG AAGGTCTNAAGGTATGCGCAAAGAGGGGNGTCCAGAACT                                                                                                                                                    ]




>consensus_1692#0
CTTTTGTAAAANCCGACGGCCCATTGACCCCCCGTAATACGACTCCACCTATTAGGNCCG
AATTGGNTACCGGCCCCCCCTCGAGNTCGACCCCACGCTTCCGCCCCAAAGAGGCCAAAG
AGCAAGCTTTCAAGGGCCCGGTTTAGACAGAAGAAATTTGAAGGATCAGAGTGACCCCGA
GATAGAACATGAAGGATGAAGTTGGCTATTATCCCCAAAAGATTTTTTTAGTGATTTAGA
CTAGAAAGTGAATGAAATTGAAAGTGTACCCCTAATAATAACTATAACCTGAGGACGGGA
GCCNTCCGGAGGTGTTCCAGTGCGAAATCAGCCCTAGGTACAAGCGCTTCTGTTTCATTG
GTCACGTTCCGTTTGCAGGTTTCAAGCCCGATCTGGAGGTTTAATTGGTGTGGCTAGTGC
TCAACAATCGCTGCTGAAAGCAGTTAAGGTATNCNCAAGAGGGGAGTCCAGAACTTCTGG
AGTAACTGGGCGGTCCTTGTTACGGTCACAAAATATGTTTGGAGAATAGCTGCTATATAT
GTCTCTGTTTTTTTTTTTTTTTTTGGATCGATCTGCTGTTTTCGCAAGCGGATGGTGTAA
AAATCTGCTGCTTTTGCAAAAAA

clustalw multiple alignements is not computed in this case