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Oryza sativa
cluster # 17038 cluster # 17038       Sequences # 52       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_17038#0 length = 719 sequences # 26  
consensus_17038#1 length = 715 sequences # 13  
consensus_17038#2 length = 583 sequences # 1  
consensus_17038#3 length = 543 sequences # 4  
consensus_17038#4 length = 484 sequences # 4  
consensus_17038#5 length = 425 sequences # 3  
consensus_17038#6 length = 215 sequences # 1  

consensusID : consensus_17038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 719
fasta sequence
                              [GGAGTAGAAAACCATTTCCTCCTCCTCCTCCTCCTCCTCCTCTAGG-GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG-CCCCGTGACCGGGAAGAAGAT-CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC-TGT-GAACCGTCCCTATGGTGGAGTGCTCTCT-GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA-GAGCAGAAGATTGTGAAGAAAGTCTT-GAAAATAC-A-GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC-TC-TTGGAAGTGGAAGCAA-GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG-TGATGA-TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT-GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATG-AATTTTACTTACTTGAAAAAAAAAAAAACACGGTCATGCCGT]

[+] EMBL CF291395             [GGAGTAGAAAACCATT   TCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAAACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA                                                                                                                                                                                                      ]
[+] EMBL CF300222             [ GAGTAGAAAACCATTTCCTCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAG                                                                                                                                                    ]
[+] EMBL CF333612             [                TCCTCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAAT                                                                                                                                   ]
[+] EMBL CF291106             [                 CCTCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCGGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATAGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GA                                                                                                                  ]
[+] EMBL CF319098             [                  CTCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT G                                                                                                                   ]
[+] EMBL CF333503             [                   TCCTCCTCCTCCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACCACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGGGTGCACTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACNTC TTGGAAGTGGAAGCAAGGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTA CTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCA                                                                                                    ]
[+] EMBL AU069919             [                             CCTCCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAA TCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAA TCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC T                                                                                                                                                                                                                                                                     ]
[+] EMBL AU164078             [                                CCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGA                                                                                                                                                                                                                                                                              ]
[+] EMBL AU068726             [                                CCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTTAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A G AAACCAAGGACAAGTCAG CTCAAAGTAGACAA  TC TTGGAAGTNGAngaa                                                                                                                                                                                                                                                       ]
[+] EMBL AU161742             [                                CCTCCTCCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A G AAACCAAGGACAAGTCAGCCTCAAAGTAGNCAAC TCTTTGGAAGTG                                                                                                                                                                                                                                                             ]
[+] EMBL AU069615             [                                      CCTCTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTNAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGTTCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTNTTAAGAAAGTCTT TAAAATAC A G AAACCATGG CAAGTCNG CT AAAGTAG CAAC TN TTTGAAGT                                                                                                                                                                                                                                                              ]
[+] EMBL AU068998             [                                         CTAGG GTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTNGTTGAA GAGCAGAAGATTGTGAAGAAA TCTT GAAAATAC A GAAAACCAAGG                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSC2984A             [                                       nntnAGGNGTTTATCCATCGNCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAACTTTT GAACCGTCCCTATG                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU160892             [                                                       ATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTNCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTNAAGGAGCAGAAGATTNTTAAGAAAGTCTTNAAAAATCC AGGNAAACCAA                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSC0418A             [                                                        TCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGTGGAACCGTCCCTATGGTGGAGTGCTCTCTGGGAACTGCAGTTAGGGA                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSC1768A             [                                                            CGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTTAA GAGCAGAAGATTGTNAAGAAAGTCTT GAAAATACAA GAAAACCAAGGACAAGTCAAGCTCAAAGTAGACAAC TCTTTGGAAGTTGAAGCAA GGCGATGTGCTATAACAAAGGGAAACATTTTT TTGTTGG TG TGG TCAATGG                                                                                                                                                                                              ]
[+] EMBL OSC3087A             [                                                            CGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCATTACACCAAGANGAGGGCNAGCGNGNCCAAGTG CCCCGTNACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTACTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TNT GAACCGTCCCTATGGTGGNGTGCTCTCT GGAACTGC                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA999415             [                                                               CTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTNGATGCACTTGATGTC AATGTTGCTGAGACATATTTGATCCGCTCTTT                                                                    ]
[+] EMBL CB683249             [                                                                                     GCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAATAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCTTTTTTGGAAAGGATCATTCATGCTTTCTTGGTTGAA GAGCATAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTACCCTCTTCTACCTGAATGTTTTAGTATAACTGTCTGAGTTTGGA                                                                                                                                              ]
[+] EMBL CF298216             [                                                                                           GCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCATTACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTT                                                                                                                                                                                   ]
[+] EMBL AU164079             [                                                                                            CGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCNCAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAG ACACCAAGAAGA GGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATG AATTTTACTTACTTGAAAAAAA                    ]
[+] EMBL AU160893             [                                                                                                                                        CCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTGNCCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATG AATTTTACTTAaaaa                           ]
[-] EMBL CF333502             [                                                                                                                                                                gtGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGGGTGCACTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATG AATTTTACTTAAAAAAAAAAAAAAAAAACACGGTCATGCCGT]
[-] EMBL CF319099             [                                                                                                                                                                                                                         GGCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATG AATTTTACTTACTTGAAAAAA                     ]
[-] EMBL CF298215             [                                                                                                                                                                                                                          GCCCAAGTG CCCCGTGACCGGGAAGAAGAT CCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GAGCAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGG TGATGA TCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTTTGAATTGCGAATG AATTTTACTTACTTGAAAAAAA                    ]
[+] EMBL BI805458             [                                                                                                                                                                                                                                                     AGATCCCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAAC TGT GAACCGTCCCTATGGTGGAGTGCTCTCT GGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAA GA CAGAAGATTGTGAAGAAAGTCTT GAAAATAC A GAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAAC TC TTGGAAGTGGAAGCAA GGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGCNCATGACCCCATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGT GATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCCTTCNTTCACTTCTCTGAATTGCGAATGCNATTTTACT   TTAAAAAAAAAA                  ]


>consensus_17038#0 GGAGTAGAAAACCATTTCCTCCTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGC GACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCA AAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCA AGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTGCCCCGTGACCGGGA AGAAGATCCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTA GGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGG AAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAA TACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGG CGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTC TTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCA TTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACT TCTCTGAATTGCGAATGAATTTTACTTACTTGAAAAAAAAAAAAACACGGTCATGCCGT



consensusID : consensus_17038#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 715
fasta sequence
                              [CACCTCCACCCACCCACCCACCCAGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC-AGGTTGTC-TA-GG-AACCGCAGGACTGTGAA-CCGT-CCAT-AT-GGTGGAGTGCTCTC-T-GGAACTGCA-GTTAGGGAAAGGATCATCCGTGCTTTC-TTGGTCGAGGAGCAGAAGATTGTCAAGAA-GGTCC-TGAAAATACA-GAAAACCAAGGACAAGACCGC-AAAGTAGAGCTCC-TTTGT-AAGGGTTGCAC-AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT-GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC-CTTTTGAGTTTAGGGTTTTC-AAATCCTCTCATC-TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAATTCA-CT-CCCTTAAATGATTTGTGGTTGTTTTAAAAAAA]

[+] EMBL AK062479             [CACCTCCACCCACCCACCCACCCAGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGATCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TA GG AACCGCAGGACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA GAAAACCAAGGACAAGACCGC AAAGTAGAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATCCTCTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGG                                                                                         ]
[+] EMBL C74023               [               ACCCACCCAGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TA GG AACCGCA GACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAATTACA G AAACCAAGGACAAGACCGC AAATTAGNG TCC TTT T AAag                                                                                                                                                                                                                                                                                             ]
[+] EMBL BE230175             [                      CAGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TAGGG AACCGCAGGACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA TTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA GAAAACCAAGGACAAGACCGC AAAGTATAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGGTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATC                                                                                                                                                                           ]
[+] EMBL AU083366             [                       AGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TA GG AACCGCAGGACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA  TTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAAGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA G                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C91722               [                           TCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TA GG AACCGCAGGACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTCTTTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACAGGAAAACCAAGGACAAGACCG  AAAGTAGAGCTCC TTTGTAAAGGGTTTCAC AATGCTGTTTTt                                                                                                                                                                                                                                                                         ]
[+] EMBL BI797850             [                                                                                                                         GACCAGGTTCTTCAAGACCCCAGTTGGGAGGCTTGTGTATCAGTACACGAAGAAGA GGCGA C GGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCC AGGTTGTC TA GG AACCGCAGGACTGTGAA CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA GAAAACCAAGGAC AGACCGC CAAGTAGAGCTCC TTTGT AAGGGTTGCAC  ATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATCCTCTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAATTCA CT CCCTTAAATGAaaaa                 ]
[+] EMBL BI797054             [                                                                                                                                                                                             CGAAGTGCCCCGTCACCGGGAAGAAGATCCA GGGATTCCCCACTTGAGCCCT CTGAGTACAAGAGGTCC A GTTGTCTTA GG AACCGCAGGACTGTGAC CCGT CCAT AT GTTGGAGTGCTCTC T GGAACTCCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGACCAGAAGATTGTCAAGAA GGTCCATGAAAATACA GAAAACCAAGGACAAGACCGCAAAAGTAGAGCTCCATTTGT AAGGGTTGCACAAATGCTGTTTTGTACACAGTGAAGAGTATTTTTGATCGGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTACACTTTTGAGTTTAGGGTTTTCAAAATCCTCTCATCATTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCAaaa                                                       ]
[+] EMBL AU029336             [                                                                                                                                                                                                                   aAAGATCCAGGGGATTCCCCACTTGAGNCCTGCTGAGTACAAGAGGTCCNAGGTTGTC TA GG AACCGCAGGACTGTGAA CCGTCCCATAAT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA GAAAACCAAGGACAAGACCGC AAAGTAGAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATCCTTTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAAaaaa aa a                               ]
[+] EMBL BI795212             [                                                                                                                                                                                                                                                             GAGGTGC AGG TGTG TA GGTAACCGCAGGACTGTGAAGCCGT CCAT ATGGGTGGAGTGCTCTCGTGGGAACTGCAGGTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGA CAGAAGATTGTCAAGAAGGGTCC TGAAAATACA GAAAACCAAGGACAAGACCGC AAAGTAGAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC  AATCCTCTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGGTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAATTCA CT CCCTTAAATGATTTGTGGTTGTTTTAAAAAAA]
[+] EMBL C74671               [                                                                                                                                                                                                                                                                                                    A CCGT CCAT AT GGTGGAGTGCTCTC T GGAACTGCA GTTAGGGAAAGGATCATCCGTGCTTTC TTGGTCGAGGAGCAGAAGATTGTCAAGAA GGTCC TGAAAATACA GAAAACCAAGGACAAGACCGC AAAGTAGAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCAT                                                                                                                                                                                                                   ]
[+] EMBL AU033226             [                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGC AAAGTAGAGCTCC TTTGT AAGGGTTGCAC AATGCTGTTTTGTACACAGTGAAGAGTATTTTTAAT GGTGGTTTATGTTGGATGATGTTTAGCATGTNAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATCCTCTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTNCCTTAATTATGAAATTNCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAATTCA CT CCCTTAAATGATTTGTGGTTGTTTTActcaaa]
[+] EMBL BI797799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGTAGAGCTCC TTTGT AAGGGTTGCAC AAGGCTGTTTTGTACACCGGGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTAC CTTTTGA TTTAGGGTTTTC AAATCCTCTCATC GTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTCATTATGAAAGTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTACCCCTCTTTTTATTTGACTTAATTCACCTCCCCTGAAATGATTTGTGGTGGTTTTAAAAAAA]
[+] EMBL BI796069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGAGAGACCTAC CTTTTGAGTTTAGGGTTTTC AAATCCTCTCATC TTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTTAATTCA CT CCCTTAAATGATTTGTGGTTGTTTTAAAAAA ]


>consensus_17038#1 CACCTCCACCCACCCACCCACCCAGCCTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTG GCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACGCGACTAAGTCGAACC AGACCAGGGTCGTCAAGACCCCAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGG CGAGCGGGCCGAAGTGCCCCGTCACCGGGAAGAAGATCCAGGGGATTCCCCACTTGAGGC CTGCTGAGTACAAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATG GTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATCCGTGCTTTCTTGGTCGAGG AGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAAAGT AGAGCTCCTTTGTAAGGGTTGCACAATGCTGTTTTGTACACAGTGAAGAGTATTTTTGAT GGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTACCTTTTGAGTTTAGGGTTT TCAAATCCTCTCATCTTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTA ATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCAT CTTTTTATTTGACTTAATTCACTCCCTTAAATGATTTGTGGTTGTTTTAAAAAAA



consensusID : consensus_17038#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence
                              [GGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAGAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGACCAAAGTGCCCCGTGACCGGGAAGAAGATCCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGTAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTNTAGTATAACTGTCTGAGTTTGGAGTACTGAAATCCGTCTAAAAAAAAAAANNNNNNNNNANNNNNNANNANNAAAAAAAAAAAAANNNAAAGGGGAAAANN]

[+] EMBL BE039610             [GGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAGAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGACCAAAGTGCCCCGTGACCGGGAAGAAGATCCAGGGAATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGTAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTNTAGTATAACTGTCTGAGTTTGGAGTACTGAAATCCGTCTAAAAAAAAAAANNNNNNNNNANNNNNNANNANNAAAAAAAAAAAAANNNAAAGGGGAAAANN]


>consensus_17038#2 GGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAGAGGCACAGCTAT GCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCAAGCTCGTGTACCAG TACACCAAGAAGAGGGCGAGCGGACCAAAGTGCCCCGTGACCGGGAAGAAGATCCAGGGA ATTCCCCATCTCAGGCCTGCTGAGTACAAGAGATCCAGGTTGTCTAGGAACCGCAGAACT GTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGT GCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAG GACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGTAAGGCGATGTGCTATAAA CAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGT TNTAGTATAACTGTCTGAGTTTGGAGTACTGAAATCCGTCTAAAAAAAAAAANNNNNNNN NANNNNNNANNANNAAAAAAAAAAAAANNNAAAGGGGAAAANN



consensusID : consensus_17038#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 543
fasta sequence
                              [CTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTTGTCTAGGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTT]

[+] EMBL AK059470             [CTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGCGACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTTGTCTAGGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTT]
[+] EMBL C28066               [                                                                                                                                                                                            ATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGNTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTNGATGNCAAATGTTGCT                                                     ]
[-] EMBL CF300223             [                                                                                                                                                                                                    GTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGACGCACTTGATGTCAAATGTTGCTGAGAGATATTTttccaaaa                                  ]
[+] EMBL AK059401             [                                                                                                                                                                                                                                                                   ATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTT]


>consensus_17038#3 CTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGCGACTACGCGGCGGCGGCGGCG GCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCAAAAGGCACAGCTATGCCACGA AGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTTGTCTAGGAACCGCAGAACTGTGAA CCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTT CTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAA GTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGG AAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAG TATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTC AAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAA TTT



consensusID : consensus_17038#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 484
fasta sequence
                              [CGGGAAGAAGATCCAGGGAATTCCNCGNTCTCAAGGGCCTGCTGAGTCACAAGAGATCCAGGTTGTCTA-GAACCGCAGAACTGTGAACCGTCCCTAT-GTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTG-AGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAAAAAA]

[+] EMBL AU161743             [CGGGAAGAAGATCCAGGGAATTCCNCGNTCTCAAGGGCCTGCTGAGTCACAAGAGATCCAGGTTGTCTA GAACCGCAGAACTGTGAACCGTCCCTAT GTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTG AGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAAAAAA]
[-] EMBL CF291396             [                         ccaTCTCA  GGCCTGCTGAGT ACAAGAGATCCAGGTTGTCTAGGAACCGCAGAACTGTGAACCGTCCCTATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTG AGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAAAAA ]
[-] EMBL CF333613             [                                                                                                          GCTCTCTGGAACTGCAGTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTG AGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAAAAAA]
[+] EMBL AU162350             [                                                                                                                                                                                   GTCTTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAAGTTTGGAGTACTTGAAATCCGTCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTNTGTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTG                         ]


>consensus_17038#4 CGGGAAGAAGATCCAGGGAATTCCNCGNTCTCAAGGGCCTGCTGAGTCACAAGAGATCCA GGTTGTCTAGAACCGCAGAACTGTGAACCGTCCCTATGTGGAGTGCTCTCTGGAACTGCA GTTAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTC TTGAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGA AGCAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTC TAGCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCG TCTACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTT GTTCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAA AAAA



consensusID : consensus_17038#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 425
fasta sequence
                              [AAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATCCGTGCTTTNTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAA--AGTAGAGCTC-CTTT-GTAAGGGTTGCACAATGCTG-TTTTGTACAC-AGTGAAGAGTAT-TTTTGATGGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCT-ACCTTTTGAGTTTAGGGTTTTC-AAATCCTCTCATCTTATAATTGTCGGAGTATTGGGACATCT-GATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCNTCTAAAAAAAAAAAAAA]

[+] EMBL AU182828             [AAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGGATCATCCGTGCTTTNTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAA  AGTAGAGCTC CTTT GTAAGGGTTGCACAATGCTG TTTTGTACAC AGTGAAGAGTAT TTTTGATGGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCT ACCTTTTGAGTTTAGGGTTTTC AAATCCTCTCATCTTATAATTGTCGGAGTATTGGGACATCT GATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCNTCTAAAAAAAAAAAAAA]
[+] EMBL BI796518             [                                                                                                                                                              GACCGCAAATAGTAGAGCTCACTTTGGTAAGGGTGGCACAAATCTGTTTTTGTACACAAGTGAAGAGTATCTTTTGATGGT GTTTATGTTGGATGATGTTTAGCATGTGAGAGACCTGACCTTTTGAGTTTA GGTTTTCAAAATCCTCTCATCTTATAATTGTCGGAGTATTGGGACATCTGGATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACAaaaa                      ]
[+] EMBL BI797645             [                                                                                                                                                                    AA  AGTAGAGCTC CTTT GTAAGGGTTGCACAATGCTG TTTTGTACAC AGTGAAGAGTAT TTTTGTTGGTGGTTTATGTTGGATGATGTTTAGCATGTGAGAGACCT ACCTTTTGAGTTTAGGGTTTTC AAATCCTCTCATCTTATAATTGTCGGAGTATTGGGACATCT GATCCCCTTGTTCCTTAATTATGAAATTTCTGTATGAACTATTGGGTACTAaaaaaa                                    ]


>consensus_17038#5 AAGAGGTCCAGGTTGTCTAGGAACCGCAGGACTGTGAACCGTCCATATGGTGGAGTGCTC TCTGGAACTGCAGTTAGGGAAAGGATCATCCGTGCTTTNTTGGTCGAGGAGCAGAAGATT GTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAAAGTAGAGCTCCTTT GTAAGGGTTGCACAATGCTGTTTTGTACACAGTGAAGAGTATTTTTGATGGTGGTTTATG TTGGATGATGTTTAGCATGTGAGAGACCTACCTTTTGAGTTTAGGGTTTTCAAATCCTCT CATCTTATAATTGTCGGAGTATTGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATT TCTGTATGAACTATTGGGTACTAGTCGAATTCACCTACATGTTAGCCNTCTAAAAAAAAA AAAAA



consensusID : consensus_17038#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 215
fasta sequence
                              [TAGGGTTTATCCCGGCGGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACACTAAGTCGAACCAGACCAGGGTCGTCAAGAAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCGAAGCGCTCACCGGGAAGAAGATCCAGGGGATTCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGT]

[+] EMBL D42261               [TAGGGTTTATCCCGGCGGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCACAGCTACACTAAGTCGAACCAGACCAGGGTCGTCAAGAAGGTGGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCGAAGCGCTCACCGGGAAGAAGATCCAGGGGATTCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGT]


>consensus_17038#6 TAGGGTTTATCCCGGCGGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTC ACAGCTACACTAAGTCGAACCAGACCAGGGTCGTCAAGAAGGTGGGAGGCTTGTGTACCA GTACACGAAGAAGAGGGCGAGCGGGCGAAGCGCTCACCGGGAAGAAGATCCAGGGGATTC CCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_17038#3      ------------------------------------------------------------
consensus_17038#4      ------------------------------------------------------------
consensus_17038#0      GGAGTAGAAAACCATTTCCTCCTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGC 60
consensus_17038#2      ------------------------------------------------------------
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      ----------------------------------CACCTCCACCCACCCACCCACCCAGC 26
consensus_17038#5      ------------------------------------------------------------
                                                                                   

consensus_17038#3      ------------------------------------------------------------
consensus_17038#4      ------------------------------------------------------------
consensus_17038#0      GACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCA 120
consensus_17038#2      --------------GGCGGCGGCGGCGACGGCGAGATGGTGCAGCGCCTGACGTACCGCA 46
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      CTCGTTTCTAGGGTTTATCGCGGCGGCGGCGGTGGCGAGATGGTGCAGCGGCTCACCTAC 86
consensus_17038#5      ------------------------------------------------------------
                                                                                   

consensus_17038#3      --------------------CTCCTCCTCCTCCTCCTCCTCTAGGGTTTATCCATCGGCG 40
consensus_17038#4      ------------------------------------------------------------
consensus_17038#0      AAAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCA 180
consensus_17038#2      AGAGGCACAGCTATGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTGGCA 106
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      CGGAAGCGTCACAGCTACGCGACTAAGTCGAACCAGACCAGGGTCGTCAAGACCCCAGGT 146
consensus_17038#5      ------------------------------------------------------------
                                                                                   

consensus_17038#3      ACTACGCGGCGGCGGCGGCGGCGGCGACGGCGAGATGGTGCAGCG--CCTGACGTACCGC 98
consensus_17038#4      -------------------------------------------------------CGGGA 5
consensus_17038#0      AGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGGCCCAAGTGCCCCGTGACCGGGA 240
consensus_17038#2      AGCTCGTGTACCAGTACACCAAGAAGAGGGCGAGCGGACCAAAGTGCCCCGTGACCGGGA 166
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      GGGAGGCTTGTGTACCAGTACACGAAGAAGAGGGCGAGCGGGCCGAAGTGCCCCGTCACC 206
consensus_17038#5      ------------------------------------------------------------
                                                                                   

consensus_17038#3      AAAAGGCACAGCTA-TGCCACGAAGTCTAATCAGACGCGGGTCGTCAAGACTCCAGGTTG 157
consensus_17038#4      AGAAGATCCAGGGAATTCCNCGNTCTCAAGGGCCTGCTGAGTCACAAGAGATCCAGGTTG 65
consensus_17038#0      AGAAGATCCAGGGAATTCCCCA---TCTCAGGCCTGCTGAGT-ACAAGAGATCCAGGTTG 296
consensus_17038#2      AGAAGATCCAGGGAATTCCCCA---TCTCAGGCCTGCTGAGT-ACAAGAGATCCAGGTTG 222
consensus_17038#6      ----------------------------------------------TAGGGTTTATCCCG 14
consensus_17038#1      GGGAAGAAGATCCAGGGGATTCCCCACTTGAGGCCTGCTGAGTACAAGAGGTCCAGGTTG 266
consensus_17038#5      ---------------------------------------------AAGAGGTCCAGGTTG 15
                                                                          *  *    *

consensus_17038#3      TCTAGGAACCGCAGAACTGTGAACCGTCCC-TATGGTGGAGTGCTCTCTGGAACTGCAGT 216
consensus_17038#4      TCTAG-AACCGCAGAACTGTGAACCGTCCC-TATG-TGGAGTGCTCTCTGGAACTGCAGT 122
consensus_17038#0      TCTAGGAACCGCAGAACTGTGAACCGTCCC-TATGGTGGAGTGCTCTCTGGAACTGCAGT 355
consensus_17038#2      TCTAGGAACCGCAGAACTGTGAACCGTCCC-TATGGTGGAGTGCTCTCTGGAACTGCAGT 281
consensus_17038#6      GCGGGCGGTGGCGAGATGGTGCAGCGGCTCACCTACCGGAAGCGTCAC---AGCTACACT 71
consensus_17038#1      TCTAGGAACCGCAGGACTGTGAACCGTCCA-TATGGTGGAGTGCTCTCTGGAACTGCAGT 325
consensus_17038#5      TCTAGGAACCGCAGGACTGTGAACCGTCCA-TATGGTGGAGTGCTCTCTGGAACTGCAGT 74
                        *  *     **   *  *** * ** *     *   ***    ** *   * ** ** *

consensus_17038#3      TAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTT 276
consensus_17038#4      TAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTT 182
consensus_17038#0      TAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTT 415
consensus_17038#2      TAGGGAAAGGATCATTCGTGCTTTCTTGGTTGAAGAGCAGAAGATTGTGAAGAAAGTCTT 341
consensus_17038#6      AAGTCGA---ACCAGACCAGGGTCGTCAA--GAAGGTGGGAGGCTTGTGTACCAGTACAC 126
consensus_17038#1      TAGGGAAAGGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT 385
consensus_17038#5      TAGGGAAAGGATCATCCGTGCTTTNTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT 134
                        **   *   * **  *  *  *  *     ** *    ** * ****  *  *   *  

consensus_17038#3      GAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAG 336
consensus_17038#4      GAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAG 242
consensus_17038#0      GAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAG 475
consensus_17038#2      GAAAATACAGAAAACCAAGGACAAGTCAGCCTCAAAGTAGACAACTCTTGGAAGTGGAAG 401
consensus_17038#6      GAAGAAGAGGGCGAGC--GGGCGAAGCGCTCACCGGGAAGAAGATCCAGGGGATTCCCAC 184
consensus_17038#1      GAAAATACAGAAAACCAAGGACAAGAC---CGCAAAGTAGAGCTCCTTTGTAAG-GGTTG 441
consensus_17038#5      GAAAATACAGAAAACCAAGGACAAGAC---CGCAAAGTAGAGCTCCTTTGTAAG-GGTTG 190
                       *** *    *   * *  ** * *  *   * *   * ***        *  *       

consensus_17038#3      CAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTA 396
consensus_17038#4      CAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTA 302
consensus_17038#0      CAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTA 535
consensus_17038#2      TAAGGCGATGTGCTATAAACAAGGAAAACATTTTTGTTGATGGTGATGATCAATGGTCTA 461
consensus_17038#6      TTGAG--GCCTGCTGAGTACAAGAGGTCCAGGT--------------------------- 215
consensus_17038#1      CACAATGCTGTTTTGTACACAGTGAAG--AGTATTTTTGATGGTGGTTTATGTTGGATGA 499
consensus_17038#5      CACAATGCTGTTTTGTACACAGTGAAG--AGTATTTTTGATGGTGGTTTATGTTGGATGA 248
                                 *  *    ***        *                              

consensus_17038#3      GCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTC 456
consensus_17038#4      GCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTC 362
consensus_17038#0      GCCTCTTCTAGCTGAATGTTTTAGTATAACTGTCTGAGTTTGGAGTACTTGAAATCCGTC 595
consensus_17038#2      GCCTCTTCTAGCTGAATGTTNTAGTATAACTGTCTGAGTTTGGAGTACT-GAAATCCGTC 520
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      TGTTTAGCATGTGAGAGACCTACCTTTTGAGTTTAGGGTTTTCAAATCCTCTCATCTTAT 559
consensus_17038#5      TGTTTAGCATGTGAGAGACCTACCTTTTGAGTTTAGGGTTTTCAAATCCTCTCATCTTAT 308
                                                                                   

consensus_17038#3      TACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGT 516
consensus_17038#4      TACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGT 422
consensus_17038#0      TACCATTGTGATGCACTTGATGTCAAATGTTGCTGAGACATATTTGATCCGCTCTTTTGT 655
consensus_17038#2      TAAAAAAAAAAANNNNNNNNNANNNNNNANNANNAAAAAAAAAAAAANNNAAAGGGGAAA 580
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      AATTGTCGGAGTAT-TGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTAT 618
consensus_17038#5      AATTGTCGGAGTAT-TGGGACATCTGATCCCCTTGTTCCTTAATTATGAAATTTCTGTAT 367
                                                                                   

consensus_17038#3      TCACTTCTCTGAATTGCGAATGAATTT--------------------------------- 543
consensus_17038#4      TCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAGCTGGTGTTTTGTTTCTAAAAA 482
consensus_17038#0      TCACTTCTCTGAATTGCGAATGAATTTTACTTACTTGAAAAAAAAAAAAACACGGTCATG 715
consensus_17038#2      ANN--------------------------------------------------------- 583
consensus_17038#6      ------------------------------------------------------------
consensus_17038#1      GAACTATT---GGGTACTAGTCGAATTCACCTACATGTTAGCCATCTTTTTATTTGACTT 675
consensus_17038#5      GAACTATT---GGGTACTAGTCGAATTCACCTACATGTTAGCCNTCTAAAAAAAAAAAAA 424
                                                                                   

consensus_17038#3      ----------------------------------------
consensus_17038#4      AA-------------------------------------- 484
consensus_17038#0      CCGT------------------------------------ 719
consensus_17038#2      ----------------------------------------
consensus_17038#6      ----------------------------------------
consensus_17038#1      AATTCACTCCCTTAAATGATTTGTGGTTGTTTTAAAAAAA 715
consensus_17038#5      A--------------------------------------- 425
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)