These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_17093#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 570 fasta sequence [GGCCGCCGTCCGCCTCACGGCGAGCACCGACCTGCTCGACCCTTCTGCCGCGATGCGCTCCTGCCTTAACTGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACACGTCGAGGGCCA-AGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTT-TATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTAGCGTA] [+] EMBL BI796642 [GGCCGCCGTCCGCCTCACGGCGAGCACCGACCTGCTCGACCCTTCTGCCGCGATGCGCTCCTGCCTTAACTGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACACGTCGGGGGCCACAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGA GCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGTATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTT TATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAA ] [+] EMBL CF329081 [ tGAGGGCCA AGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTT TATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTAGCGTA] [-] EMBL CF329082 [ GAGGGCCA AGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTT TATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACT ] [+] EMBL AU161153 [ AGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTTTTCTTACATCATGTTGACCGGTGCATTTGGNTTGATGGTGCCTTCGGNTTCTTNATGTTCCANTTATTGGTGTAGGAATGTNAAACCTTTTNTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTTNTATGAAAGTTTATGAGATTTGAAGTAAAAA ] [+] EMBL CF332084 [ TGAGGAGGCTCAATAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAGTGTGATGACCATAATTCGCTT TATGAAAGTTTATGAGATTTGAAGTAAAAAAAAA ] consensusID : consensus_17093#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 489 fasta sequence [CATGGACTGCAGGAGTAGAAACTCACCCGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT-CGCTTTATGAAAGTTTATG-AGATTTGAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAG] [+] EMBL CF335379 [CATGGACTGCAGGAGTAGAAACTCACCCGGTTCGCCGCCTCC CAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCCGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAA ] [-] EMBL CF335380 [ ATGGACTGCAGGAGTAGAAACTCACCCGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCCGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAA ] [+] EMBL CF327678 [ CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAA ] [+] EMBL CF331232 [ CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGT ] [-] EMBL CF331233 [ GGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAA ] [-] EMBL CF327679 [ GGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAA ] [-] EMBL CF321749 [ TTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGAAAAAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTACCAAAAAAA ] [+] EMBL AU163658 [ CGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATNAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGT NAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCCGCTTTATGAAAGTTTATGAAGATTTGAAGTAAAAAA ] [+] EMBL AU065122 [ CGCCTCCACAAATCCGCCGCCGCCGACNTCGAGAGAGAAGGGACAGAGAGCGAGTNCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAA ] [+] EMBL AU100893 [ CCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAA ] [+] EMBL AU058223 [ cgCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGT NTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATTATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTNAAna ] [+] EMBL C27894 [ ACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAG ] [+] EMBL AU063243 [ ACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU063178 [ ACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAA ] [+] EMBL AU197807 [ ACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAA ] [+] EMBL AU063242 [ ACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAA ] [+] EMBL AU165832 [ CCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTG AACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG NGATTTGAAGTAAA ] [+] EMBL AU197524 [ GCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCG CGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTG AACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAA ] [+] EMBL BI799531 [ GCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCC CCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGTATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAA ] [-] EMBL BE039905 [ CCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAAA ] [+] EMBL AU057612 [ CCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAAAAAAAA ] [+] EMBL AU160977 [ CCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGT NTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTG CTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAA ] [+] EMBL AU057744 [ CCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGT NTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGANGTAAAAAAAAAAAAAAAA ] [+] EMBL AU161162 [ gccgnaCGCCGCCGACGTCGAGAGANAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATNAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGT NAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTNGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAA ] [+] EMBL OSR05272A [ gnCGACGACGACGTCGAGAGAGAAGGGACAGAGAGCGAGTNCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGNTTTATGNAAGTTTATG AGATTTGAAGTAAAAAANAA ] [+] EMBL CA753392 [ CCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAG] [-] EMBL BE039656 [ CGACGACGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAA ] [+] EMBL CF332112 [ TTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGANGTNNNNNAAAAAAAAAAAAA ] [-] EMBL CF332111 [ TCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGCCCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU160983 [ GCCGCGATNAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATT CGCTTTATGAAAGTTTATG AGATTTGAAGTAAAAAA ] consensusID : consensus_17093#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 445 fasta sequence [CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCTCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGT---AAAAAAAAAAAAAAAAAAACACAGTCATGCCGTTACGTAGCGTATCGTTGACAG] [+] EMBL CF330306 [CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCTCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGT AAAAAA ] [-] EMBL CF330307 [ GGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCTCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGT AAAAAAAAAAAAAAAAAAACACAGTCATGCCGTTACGTAGCGTATCGTTGACAG] [-] EMBL CF332085 [ GAGGAGGCTCAATAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGAAAAAATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAAAAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGTAGTGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAAAAAAAAAAAACAAAATCATGCCGTTACGTAGCGTATCGTTGACAG] [+] EMBL AU225836 [ gccGCT CGAAAGATGAGGCAGAGATCCAAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGagcgg ] consensusID : consensus_17093#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 420 fasta sequence [CGGTTCGCCGCCTCC-CAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT-CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA-GATC-CAAGTAGTCGTTATCAGTAGTGT-GGATGTCTTCT-TACATCATGT--TGAC-CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC-AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT-GGTTAATTCT-AGCTGTTGAAATGTCTCT-GGTTATGTTCCTAGAC-TGGAGTATTATGTAATGTGATGACCATAATTCGC-TTTATGAAAGTTTATGAGATTTGAAGTACCTTTACCTGTCCTTTTGATCTTAAAAAA] [+] EMBL CF333306 [CGGTTCGCCGCCTCC CAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGTGGGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTNT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTACCTGTCCTTTTGATCTTAAAAA ] [+] EMBL CF302526 [CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTAaaaaa ] [+] EMBL CF313624 [CGGTTCGCCGCCTCC CAAATCCGCCGCCGCCGACGTCGGGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTAaa ] [-] EMBL CF333305 [ GGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTACCTGTCCTTTTGATCTTAAAAAA] [-] EMBL CF302525 [ GGTTCGCCGCCTCCACAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGTCCCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTAaaaaaa ] [+] EMBL CF321748 [ TTCGCCGCCTCC CAAATCCGCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCTTATGATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCaaaaaa ] [+] EMBL AU058330 [ GCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATTATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTG AACCTTTTCTGGTTTTNGGTTAATTCTAAGCTGTTGAAATGTCNCTGGGTAATGTTCCTAGAC TGGGGTATTATGGAATGGGATGACCANAATTCCCTTTTATG ] [+] EMBL BI797167 [ GCCGCCGCCGACGTCGAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGTATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAaa ] [+] EMBL BE607489 [ GAGAGAGAAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTACC ] [+] EMBL AU163897 [ AAGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGACTTGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAA ] [+] EMBL C28044 [ ccgGGGACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCNATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTTTTCT TACATCATGT TGAC CGGTGCATTTGGNTTGATGGTGCCTTCGGATTCTTNATGTTCC AGTTATTGGTGTAGGAATGT NAACCTTTTNTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCTGGGTTATGTTCCTAGAC TGGAGTATTATGT ] [-] EMBL CF313625 [ GACAGAGAGCGAGTGCTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCA ATGGAATGAAGGTGCCTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAAAGTAAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGG ] [+] EMBL AU098302 [ AGCGAGT NTTCGCCGT CCCCGCCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT TGAC CGGTGCATTTGGATTGATGGTG CTTCGGATTCTTGATGTTCC AGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTAaaaa ] [+] EMBL BI795157 [ GGGCCAA TGGAAGAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGA GATCACAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCTGTACATCATGTGGTGACACGGTGCATTTGTATTGATGGTGCCTTCGGATTCTTGATGTTCCAAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGTTTT GGTTAATTCT AGCTGTTGAAATGTCTCT GGTTATGTTCCTAGAC TGGAGTATTATGTAATGTGATGACCATAATTCGC TTTATGAAAGTTTATGAGATTTGAAGTACCTTTACCTGTCaaaa ] [+] EMBL CF332040 [ gAGTAGA AAGAAGAGAATGAGGAGGCTCAATAGGAAGCGCCGAAAGATGAGGCAGA GATC CAAGTAGTCGTTATCAGTAGTGT GGATGTCTTCT TACATCATGT CGAC CGGTGCATTTGGATTGATGGTGCCTTCG ] consensusID : consensus_17093#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 329 fasta sequence [GAGGATTCGGCACGAGCCGCGCGATGAGGGCCAAGTGGAAGAAAAAAAAAATGAGGAGGCTCNAGAGGAAGCGCCGAAAGATGAGGCAGANATCCNAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTNGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTANCTGTTGAAATGTCTCTGGTTATGTTCCNAGACTGGAGTATTATGTAATGTGATNACCATAATTCNCTTTATGAAAGTTTATGANATTTGAANTN] [+] EMBL AA752801 [GAGGATTCGGCACGAGCCGCGCGATGAGGGCCAAGTGGAAGAAAAAAAAAATGAGGAGGCTCNAGAGGAAGCGCCGAAAGATGAGGCAGANATCCNAGTAGTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGATGGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTNGGAATGTGAAACCTTTTCTGGTTTTGGTTAATTCTANCTGTTGAAATGTCTCTGGTTATGTTCCNAGACTGGAGTATTATGTAATGTGATNACCATAATTCNCTTTATGAAAGTTTATGANATTTGAANTN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_17093#1 ------------------------------------------------------------ consensus_17093#3 ------------------------------------------------------------ consensus_17093#2 ------------------------------------------------------------ consensus_17093#4 ------------------------------------------------------------ consensus_17093#0 GGCCGCCGTCCGCCTCACGGCGAGCACCGACCTGCTCGACCCTTCTGCCGCGATGCGCTC 60 consensus_17093#1 ---------------------------------CATGGACTGCAGGAGTAGAAACTCACC 27 consensus_17093#3 ------------------------------------------------------------ consensus_17093#2 ------------------------------------------------------------ consensus_17093#4 ------------------------------------------------------------ consensus_17093#0 CTGCCTTAACTGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCA 120 consensus_17093#1 CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCG----ACGTCGAGAGAGAAGGGACAGAG 83 consensus_17093#3 CGGTTCGCCGCCTCC-CAAATCCGCCGCCGCCG----ACGTCGAGAGAGAAGGGACAGAG 55 consensus_17093#2 CGGTTCGCCGCCTCCACAAATCCGCCGCCGCCG----ACGTCGAGAGAGAAGGGACAGAG 56 consensus_17093#4 ------------------------------------------------------------ consensus_17093#0 AAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTAT 180 consensus_17093#1 AGCGAGTGC-TTCGCCGTCCCCGCCGC------------CGCGATGAGGGCCAAGTGGAA 130 consensus_17093#3 AGCGAGTGC-TTCGCCGTCCCCGCCGC------------CGCGATGAGGGCCAAGTGGAA 102 consensus_17093#2 AGCGAGTGC-TTCGCCGTCCCCGCCGC------------CGCGATGAGGGCCAAGTGGAA 103 consensus_17093#4 ---GAG-GA-TTCG--GCACGAGCCGC-------------GCGATGAGGGCCAAGTGGAA 40 consensus_17093#0 TGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACACGTCGAGGGCCAAGTGGAA 240 * * **** * ** *************** consensus_17093#1 GAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTA 190 consensus_17093#3 GAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTA 162 consensus_17093#2 GAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCTCCGAAAGATGAGGCAGAGATCCAAGTA 163 consensus_17093#4 GAAAAAAAAAATGAGGAGGCTCNAGAGGAAGCGCCGAAAGATGAGGCAGANATCCNAGTA 100 consensus_17093#0 GAAGAAGAGAATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTA 300 *** ** * ************* ********* ***************** **** **** consensus_17093#1 GTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGAT 250 consensus_17093#3 GTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGAT 222 consensus_17093#2 GTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGAT 223 consensus_17093#4 GTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGAT 160 consensus_17093#0 GTCGTTATCAGTAGTGTGGATGTCTTCTTACATCATGTTGACCGGTGCATTTGGATTGAT 360 ************************************************************ consensus_17093#1 GGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGT 310 consensus_17093#3 GGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGT 282 consensus_17093#2 GGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGT 283 consensus_17093#4 GGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTNGGAATGTGAAACCTTTTCTGGT 220 consensus_17093#0 GGTGCCTTCGGATTCTTGATGTTCCAGTTATTGGTGTAGGAATGTGAAACCTTTTCTGGT 420 ************************************* ********************** consensus_17093#1 TTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGT 370 consensus_17093#3 TTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGT 342 consensus_17093#2 TTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGT 343 consensus_17093#4 TTTGGTTAATTCTANCTGTTGAAATGTCTCTGGTTATGTTCCNAGACTGGAGTATTATGT 280 consensus_17093#0 TTTGGTTAATTCTAGCTGTTGAAATGTCTCTGGTTATGTTCCTAGACTGGAGTATTATGT 480 ************** *************************** ***************** consensus_17093#1 AATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAA 430 consensus_17093#3 AATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGTACCTTTACCTGT 402 consensus_17093#2 AATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAA 403 consensus_17093#4 AATGTGATNACCATAATTCNCTTTATGAAAGTTTATGANATTTGAANTN----------- 329 consensus_17093#0 AATGTGATGACCATAATTCGCTTTATGAAAGTTTATGAGATTTGAAGTAAAAAAAAAAAA 540 ******** ********** ****************** ******* * consensus_17093#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAG 489 consensus_17093#3 CCTTTTGATCTTAAAAAA----------------------------------------- 420 consensus_17093#2 AAAAAAACACAGTCATGCCGTTACGTAGCGTATCGTTGACAG----------------- 445 consensus_17093#4 ----------------------------------------------------------- consensus_17093#0 AAAAA-ACACTGTCATGCCGTTACTAGCGTA---------------------------- 570 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||