cluster # 1713

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Oryza sativa
cluster # 1713 cluster # 1713 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1713#0 length = 603 sequences # 2

consensusID : consensus_1713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 603
fasta sequence

                              [AAGATAAGAGGAACCAAACAAAAAAAATAAATGGAGAAACACATGCATGGCTGACTGCTTGTCAACGTGGATCATCATCATACAGATGCTGGCCAGCTGTCATGCAGAAAGAGCACAACTCTAGACAATTTCTCTCCTTTTTCCTCACATGAAAGTAAAGGCCCTGTGGCTCAACAAATAATGTGAAGATCTCTCATTTTCATTTTCCTTCTTTTCCCTAGAGAAAGTAGTAGACTGCACCAATAAATATCCTAACAGTTACTCTTCAATTATATGTTAATTATATATTGTTTGACTCTTTTTTAATTAAATTTCTATAAGTTTAATCAAGTTTGTAGAAAATATACCGCTATTTTCAATACAAAGTAAACATATTGCCAAGGTATATTTAATATTAAATTTAATGAAACTAATTTGGTGTTACAGATGTTGCTTTTTTTCCCAAAGAACTTTCATAAGCAAAATATCAAACGACTTATAATTTTATGGGGGCGAAGAGAGTATTTATTAAGAAAGCATAACAGCTTTGATTATAAGCCGTAACCTTTTTAGCAATTAAAAGTAATTTATGTGTAATATATTTACATATGTGTNTTTATAAAA]

[+] EMBL CB639348             [AAGATAAGAGGAACCAAACAAAAAAAATAAATGGAGAAACACATGCATGGCTGACTGCTTGTCAACGTGGATCATCATCATACAGATGCTGGCCAGCTGTCATGCAGAAAGAGCACAACTCTAGACAATTTCTCTCCTTTTTCCTCACATGAAAGTAAAGGCCCTGTGGCTCAACAAATAATGTGAAGATCTCTCATTTTCATTTTCCTTCTTTTCCCTAGAGAAAGTAGTAGACTGCACCAATAAATATCCTAACAGTTACTCTTCAATTATATGTTAATTATATATTGTTTGACTCTTTTTTAATTAAATTTCTATAAGTTTAATCAAGTTTGTAGAAAATATACCGCTATTTTCAATACAAAGTAAACATATTGCCAAGGTATATTTAATATTAAATTTAATGAAACTAATTTGGTGTTACAGATGTTGCTTTTTTTCCCAAAGAACTTTCATAAGCAAAATATCAAACGACTTATAATTTTATGGGGGCGAAGAGAGTATTTATTAAGAAAGCATAACAGCTTTGATTATAAGCCGTAACCTTTTTAGCAATTAAAAGTAATTTATGTGTAATATATTTACATATGTGTNTTTATAAAA]
[+] EMBL CB641186             [AAGATAAGAGGAACCAAACAAAAAAAATAAATGGAGAAACACATGCATGGCTGACTGCTTGTCAACGTGGATCATCATCATACAGATGCTGGCCAGCTGTCATGCAGAAAGAGCACAACTCTAGACAATTTCTCTCCTTTTTCCTCACATGAAAGTAAAGGCCCTGTGGCTCAACAAATAATGTGAAGATCTCTCATTTTCATTTTCCTTCTTTTCCCTAGAGAAAGTAGTAGACTGCACCAATAAATATCCTAACAGTTACTCTTCAATTATATGTTAATTATATATTGTTTGACTCTTTTTTAATTAAATTTCTATAAGTTTAATCAAGTTTGTAGAAAATATACCGCTATTTTCAATACAAAGTAAACATATTGCCAAGGTATATTTAATATTAAATTTAATGAAACTAATTTGGTGTTACAGATGTTGCTTTTTTTCCCAAAGAACT                                                                                                                                                        ]




>consensus_1713#0
AAGATAAGAGGAACCAAACAAAAAAAATAAATGGAGAAACACATGCATGGCTGACTGCTT
GTCAACGTGGATCATCATCATACAGATGCTGGCCAGCTGTCATGCAGAAAGAGCACAACT
CTAGACAATTTCTCTCCTTTTTCCTCACATGAAAGTAAAGGCCCTGTGGCTCAACAAATA
ATGTGAAGATCTCTCATTTTCATTTTCCTTCTTTTCCCTAGAGAAAGTAGTAGACTGCAC
CAATAAATATCCTAACAGTTACTCTTCAATTATATGTTAATTATATATTGTTTGACTCTT
TTTTAATTAAATTTCTATAAGTTTAATCAAGTTTGTAGAAAATATACCGCTATTTTCAAT
ACAAAGTAAACATATTGCCAAGGTATATTTAATATTAAATTTAATGAAACTAATTTGGTG
TTACAGATGTTGCTTTTTTTCCCAAAGAACTTTCATAAGCAAAATATCAAACGACTTATA
ATTTTATGGGGGCGAAGAGAGTATTTATTAAGAAAGCATAACAGCTTTGATTATAAGCCG
TAACCTTTTTAGCAATTAAAAGTAATTTATGTGTAATATATTTACATATGTGTNTTTATA
AAA

clustalw multiple alignements is not computed in this case