cluster # 1717

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Oryza sativa
cluster # 1717 cluster # 1717 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1717#0 length = 589 sequences # 2

consensusID : consensus_1717#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 589
fasta sequence

                              [CTATATATATACATGTAAAAACAATAACATGTATGGAGCAAATTAAGCATGGAGTAATTAAGCTAGGTGGTGGGCGGCATCTTGGGGTAGCGAGAGCGGGCGCAGGCGACGCCGAGGAGGAGGACGGCGGCGAGGGAGAGGGCGAGCGCGGCGGCGCCGGCGTTGCAGTACCTCCGGTACAACCGGCAGACGGCGTACCAGCCGCTGGCCTCGTTCCCCCACATGGCGATCGACCCGATCGCGCCGGCGCCCGCCGTCGCCGCCGCCTCCAGGTTCACCACCACCGCGTCCGCGTGGTGCAGCCACCACCGCCCCATCGCCTTCCTCGCCGCCGCCGCCGCCGTCGCCGCCGCGTACACCGTGCACACCAGGTTCACCGCCACGAAGCCAATCCAGACTTGGAAGAGGGTGAAGTCGACGCGGATGCCCCAGCGCTGCTGGTGGTTGGCGGCGACGACGACGGCGGCGGCGAGCGACGTGGCGGCGGCGAGAAGCCGGAGCGAGACGTCGACGGCGATGTCGGCGGTGGAGGCGACCGTCACCGCCTCCTGCGATTCGAGCTCCACCATCCTCGTCGATCGATCAGCGT]

[+] EMBL CB641796             [CTATATATATACATGTAAAAACAATAACATGTATGGAGCAAATTAAGCATGGAGTAATTAAGCTAGGTGGTGGGCGGCATCTTGGGGTAGCGAGAGCGGGCGCAGGCGACGCCGAGGAGGAGGACGGCGGCGAGGGAGAGGGCGAGCGCGGCGGCGCCGGCGTTGCAGTACCTCCGGTACAACCGGCAGACGGCGTACCAGCCGCTGGCCTCGTTCCCCCACATGGCGATCGACCCGATCGCGCCGGCGCCCGCCGTCGCCGCCGCCTCCAGGTTCACCACCACCGCGTCCGCGTGGTGCAGCCACCACCGCCCCATCGCCTTCCT                                                                                                                                                                                                                                                                       ]
[-] EMBL CB641795             [                                                                                                                                                                                                                                                                          CTCCAGGTTCACCACCACCGCGTCCGNGTGGTGCAGCCACCACCGCCCCATCGCCTTCCTCGCCGCCGCCGCCGCCGTCGCCGCCGCGTACACCGTGCACACCAGGTTCACCGCCACGAAGCCAATCCAGACTTGGAAGAGGGTGAAGTCGACGCGGATGCCCCAGCGCTGCTGGTGGTTGGCGGCGACGACGACGGCGGCGGCGAGCGACGTGGCGGCGGCGAGAAGCCGGAGCGAGACGTCGACGGCGATGTCGGCGGTGGAGGCGACCGTCACCGCCTCCTGCGATTCGAGCTCCACCATCCTCGTCGATCGATCAGCGT]




>consensus_1717#0
CTATATATATACATGTAAAAACAATAACATGTATGGAGCAAATTAAGCATGGAGTAATTA
AGCTAGGTGGTGGGCGGCATCTTGGGGTAGCGAGAGCGGGCGCAGGCGACGCCGAGGAGG
AGGACGGCGGCGAGGGAGAGGGCGAGCGCGGCGGCGCCGGCGTTGCAGTACCTCCGGTAC
AACCGGCAGACGGCGTACCAGCCGCTGGCCTCGTTCCCCCACATGGCGATCGACCCGATC
GCGCCGGCGCCCGCCGTCGCCGCCGCCTCCAGGTTCACCACCACCGCGTCCGCGTGGTGC
AGCCACCACCGCCCCATCGCCTTCCTCGCCGCCGCCGCCGCCGTCGCCGCCGCGTACACC
GTGCACACCAGGTTCACCGCCACGAAGCCAATCCAGACTTGGAAGAGGGTGAAGTCGACG
CGGATGCCCCAGCGCTGCTGGTGGTTGGCGGCGACGACGACGGCGGCGGCGAGCGACGTG
GCGGCGGCGAGAAGCCGGAGCGAGACGTCGACGGCGATGTCGGCGGTGGAGGCGACCGTC
ACCGCCTCCTGCGATTCGAGCTCCACCATCCTCGTCGATCGATCAGCGT

clustalw multiple alignements is not computed in this case