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Oryza sativa
cluster # 1734 cluster # 1734       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1734#0 length = 2665 sequences # 2  

consensusID : consensus_1734#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2665
fasta sequence
                              [TAAAACGAGCGGCCGCTCGAAGCGGCCACTGCACAGCGCCCTCTCGCCTCCTCGCCTCGCCGCCGCCGCCGGCTTAAGGCTCTCCTCCCCGCGCCGTACCGGCGGGAGTGTGGAGGTGTTGTGCTGCGGCGTGGGTGTGTTGGGAGTTGGGGGGTGAAGCATGATGGATGGATCCACCGCTGCGGCGGCGGAGCTGGAGGCGGCGGAGAGGGTGGTGATGAGGTGGGACTCCACGGCGTCGGCGTCCTACGGGGGCGGGGGCGGGGACGAGCAGATGCTGTTCGATGGCGGCGGTGACCGGGTGGAGGCGGAGCGGTTCCTCCGGGCTGTGGATGACCTACGGCGGCTGGCGCCGCCGTCCCCGGCCACGGTCGGGAGCCCGCGCCGCACCTCGTCGGCTAGCGGCGGCGGAGGGGCGGCGTCCAACGCCGTCCAGGTCGCGATGGCGCGGCTGGAGGACGAGTTCCGCCACGTGCTGTCGTCGCGCGCCCTCGACCTGGAGATCGAGGCGCTCGCCGACCTCACCTCGCTCTCCATGTGCAGCGAACGGACCAACTCCGCGGACGTCGCCGAGGAAGCGGCGGCTGCGGACGAAGACGACTCCGTGTCGTCCTCCGTCGGCCGCCGCAGCAGCTACCGCTCGCTGCGCAGCATCCGAGAAATCGATCTCCTCCCCGCGGACGCCATCTCCGACCTCCACGCCATCGCCTCCCGCATAGCCGTCGCCGGCTACGGCCGCGAGTGCGTCCAGGTGTACGCCTCCGTCCGCAAGCCGGCCGTCGACTCCGCGCTCCGCCGCCTCGGCGTTGAGAAGCTCAGCATCGGCGACGTGCAGCGGCTCGAGTGGGAAGTCCTCGAGGCCAAGATCCGCCGCTGGATCCGTGCTGCCCGCGCCGCCGTCCGCGGCGTCTTCGCCAGCGAGCGTCGACTCTGCTTCCTCATCTTCCACGACCTTCCCCTCTCCAGCTCTACCATCACCACTGCCACCCACGACGCTCCCTTCGCGGAAGCCGTCAAGGGCGCCGCCCTGCAGCTCTTCGGCTTCGCCGAGGCGATCAGCATCGGCCGCCGCTCACCGGAGAAGCTGTTCAAGATCATTGACCTGCACGACGCGATCGCCGATCTGTTGCCTGACGTCTCCGACATCTTTGCTGCATCCAAGGCCGGGGAATCCATATACGTGCAGGCTGCCGAGATCAGGTCGCGTCTCGCTGATGCCGTGCGTGGTATACTGTCGGAATTTGAGAACACTGTGCTTCGTGACCCGTCGAAGACTCCGGTGCCTGGTGGTACCATCCATCCTCTCACTCGCTATGTCATGAATTACAGTAGCCTCATTTCTGACTACAAAACCACACTGTCTGAGCTGATTGTGTCGCGGCCATTGGCTTGCTCCCGAATTGCTCCTGAGGGCAATGAGAATGCCCCATCCTTCCCTGATCTTGACCTTGCCGACCCTGACAGTCAGTTACCCCTTGCTGCTCATCTTATCTGGATTATTGTGGTTCTTGAGCACAATCTTGAGAGCAAAGCATCACTCTACAAGGATGCGGCACTCTCTCATTTGTTCGTCATGAACAATGTACACTATATTGCACACAAGATAAAGGATTCACCGGAGCTCCGGGGGCTTATTGGTGATGAGTATTTGAAGCAGCTGACAGGTAAGTTCCGGCTCGCAGCCACTCGCTATCAACGGACAGCATGGTTGAAGATCCTGAATTGTCTGAGAGATGAAGGTCTGCATGTCAGTGGGGGCTTTTCATCAGGGGTATCCAAATCAGCACTCCGGGAGCGTTTCAAGTCTTTCAATGCTGCATTCGAGGAGGCACATAGGGTTCAATCTGCTTGGTATGTGCCAGACACGCAGCTGAGAGAAGAGCTTAGGATATCAATAGCAGAGAAACTTCTTCCAGCATATCGATCCTTCCTTGGTCGGTTCCGGCATCACATAGAGAATGGAAGGCACCCAGAGTTGTACATCAAATACTCAGTTGAGGACCTTGAGACGTCCGTCACAAATTTCTTTGAGGGTTGTCCACCTTCGCTACATAACAGGAGAAGATCCCATGGATGAGAGGTGGCTTGAAGACTCAAAAGATCTCTATTGTTGACTGATGAGTGTGGTTGCCTAGTATTCTACAATGCTTCGGGAAAAGCAAGACTT-AAGGGTATAGTTGGTGATGATTTCTTCTACTAGAGGTAATCTGAAACAGGATCAGGATCTTATTGAAACTGTCAAATTCCTTAGTGGTTCTTCCTTTTATAGCCAACCTTGTTCGTTTGTTACACTATCATCATATCTTTTATGATTAGATTGTTCATATA-GGTCTGTTCTTTCAGAATGTTTCGCAGTTGTAAGTTGTAACATCATGGTG-TTTGTTTGACACTTAACTGAGTGTCTTGTCACCTTTTTTTGGTTGGTCAGATATATATTAAGGATTGCCCTTTCTAGATTANATGTGAAACAAAAAAAAAAGAAAACTCGGGGGGGGGGGCCCGGGCCNCAATTGCGGCCTATAGGGGATGGGTGTTACCCCCGCCTCCCCGGCCCGTCGTGTTGCGGCGGGGTGGGACTGGGAGAAACCTTGGGGGGCCCCCAGCTAGATGGGCTGGGAGCACATTGCCCCTTGGGGCGGGCGGGCGGGTGGTGTAAAAAGCCGCG]

[+] EMBL AK100577             [TAAAACGAGCGGCCGCTCGAAGCGGCCACTGCACAGCGCCCTCTCGCCTCCTCGCCTCGCCGCCGCCGCCGGCTTAAGGCTCTCCTCCCCGCGCCGTACCGGCGGGAGTGTGGAGGTGTTGTGCTGCGGCGTGGGTGTGTTGGGAGTTGGGGGGTGAAGCATGATGGATGGATCCACCGCTGCGGCGGCGGAGCTGGAGGCGGCGGAGAGGGTGGTGATGAGGTGGGACTCCACGGCGTCGGCGTCCTACGGGGGCGGGGGCGGGGACGAGCAGATGCTGTTCGATGGCGGCGGTGACCGGGTGGAGGCGGAGCGGTTCCTCCGGGCTGTGGATGACCTACGGCGGCTGGCGCCGCCGTCCCCGGCCACGGTCGGGAGCCCGCGCCGCACCTCGTCGGCTAGCGGCGGCGGAGGGGCGGCGTCCAACGCCGTCCAGGTCGCGATGGCGCGGCTGGAGGACGAGTTCCGCCACGTGCTGTCGTCGCGCGCCCTCGACCTGGAGATCGAGGCGCTCGCCGACCTCACCTCGCTCTCCATGTGCAGCGAACGGACCAACTCCGCGGACGTCGCCGAGGAAGCGGCGGCTGCGGACGAAGACGACTCCGTGTCGTCCTCCGTCGGCCGCCGCAGCAGCTACCGCTCGCTGCGCAGCATCCGAGAAATCGATCTCCTCCCCGCGGACGCCATCTCCGACCTCCACGCCATCGCCTCCCGCATAGCCGTCGCCGGCTACGGCCGCGAGTGCGTCCAGGTGTACGCCTCCGTCCGCAAGCCGGCCGTCGACTCCGCGCTCCGCCGCCTCGGCGTTGAGAAGCTCAGCATCGGCGACGTGCAGCGGCTCGAGTGGGAAGTCCTCGAGGCCAAGATCCGCCGCTGGATCCGTGCTGCCCGCGCCGCCGTCCGCGGCGTCTTCGCCAGCGAGCGTCGACTCTGCTTCCTCATCTTCCACGACCTTCCCCTCTCCAGCTCTACCATCACCACTGCCACCCACGACGCTCCCTTCGCGGAAGCCGTCAAGGGCGCCGCCCTGCAGCTCTTCGGCTTCGCCGAGGCGATCAGCATCGGCCGCCGCTCACCGGAGAAGCTGTTCAAGATCATTGACCTGCACGACGCGATCGCCGATCTGTTGCCTGACGTCTCCGACATCTTTGCTGCATCCAAGGCCGGGGAATCCATATACGTGCAGGCTGCCGAGATCAGGTCGCGTCTCGCTGATGCCGTGCGTGGTATACTGTCGGAATTTGAGAACACTGTGCTTCGTGACCCGTCGAAGACTCCGGTGCCTGGTGGTACCATCCATCCTCTCACTCGCTATGTCATGAATTACAGTAGCCTCATTTCTGACTACAAAACCACACTGTCTGAGCTGATTGTGTCGCGGCCATTGGCTTGCTCCCGAATTGCTCCTGAGGGCAATGAGAATGCCCCATCCTTCCCTGATCTTGACCTTGCCGACCCTGACAGTCAGTTACCCCTTGCTGCTCATCTTATCTGGATTATTGTGGTTCTTGAGCACAATCTTGAGAGCAAAGCATCACTCTACAAGGATGCGGCACTCTCTCATTTGTTCGTCATGAACAATGTACACTATATTGCACACAAGATAAAGGATTCACCGGAGCTCCGGGGGCTTATTGGTGATGAGTATTTGAAGCAGCTGACAGGTAAGTTCCGGCTCGCAGCCACTCGCTATCAACGGACAGCATGGTTGAAGATCCTGAATTGTCTGAGAGATGAAGGTCTGCATGTCAGTGGGGGCTTTTCATCAGGGGTATCCAAATCAGCACTCCGGGAGCGTTTCAAGTCTTTCAATGCTGCATTCGAGGAGGCACATAGGGTTCAATCTGCTTGGTATGTGCCAGACACGCAGCTGAGAGAAGAGCTTAGGATATCAATAGCAGAGAAACTTCTTCCAGCATATCGATCCTTCCTTGGTCGGTTCCGGCATCACATAGAGAATGGAAGGCACCCAGAGTTGTACATCAAATACTCAGTTGAGGACCTTGAGACGTCCGTCACAAATTTCTTTGAGGGTTGTCCACCTTCGCTACATAACAGGAGAAGATCCCATGGATGAGAGGTGGCTTGAAGACTCAAAAGATCTCTATTGTTGACTGATGAGTGTGGTTGCCTAGTATTCTACAATGCTTCGGGAAAAGCAAGACTT AAGGGTATAGTTGGTGATGATTTCTTCTACTAGAGGTAATCTGAAACAGGATCAGGATCTTATTGAAACTGTCAAATTCCTTAGTGGTTCTTCCTTTTATAGCCAACCTTGTTCGTTTGTTACACTATCATCATATCTTTTATGATTAGATTGTTCATATA GGTCTGTTCTTTCAGAATGTTTCGCAGTTGTAAGTTGTAACATCATGGTG TTTGTTTGACACTTAACTGAGTG                                                                                                                                                                                                                                                                        ]
[+] EMBL CA756830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTTCAATGCTGCATTCGAGGAGGCACATAGGGTTCAATCTGCTTGGTATGTGCCAGACACGCAGCTGAGAGAAGAGCTTAGGATATCAATAGCAGAGAAACTTCTTCCAGCATATCGATCCTTCCTTGGTCGGTTCCGGCATCACATAGAGAATGGAAGGCACCCAGAGTTGTACATCAAATACTCAGTTGAGGACCTTGAGACGTCCGTCACAAATTTCTTTGAGGGTTGTCCACCTTCGCTACATAACAGGAGAAGATCCCATGGATGAGAGGTGGCTTGAAGACTCAAAAGATCTCTATTGTTGACTGATGAGTGTGGTTGCCTAGTATTCTACAATGCTTCGGGAAAAGCAAGACTTAAAGGGTATAGTTGGTGATGATTTCTTCTACTAGAGGTAATCTGAAACAGGATCAGGATCTTATTGAAACTGTCAAATTCCTTAGTGGTTCTTCCTTTTATAGCCAACCTTGTTCGTTTGTTACACTATCATCATATCTTTTATGATTAGATTGTTCATATAGGGTCTGTTCTTTCAAAATGTNTCGCAGTTGTAAGTTGT ACATCATGGGGTTTTGTTTGACACTTAACTGAGTGTCTTGTCACCTTTTTTTGGTTGGTCAGATATATATTAAGGATTGCCCTTTCTAGATTANATGTGAAACAAAAAAAAAAGAAAACTCGGGGGGGGGGGCCCGGGCCNCAATTGCGGCCTATAGGGGATGGGTGTTACCCCCGCCTCCCCGGCCCGTCGTGTTGCGGCGGGGTGGGACTGGGAGAAACCTTGGGGGGCCCCCAGCTAGATGGGCTGGGAGCACATTGCCCCTTGGGGCGGGCGGGCGGGTGGTGTAAAAAGCCGCG]


>consensus_1734#0 TAAAACGAGCGGCCGCTCGAAGCGGCCACTGCACAGCGCCCTCTCGCCTCCTCGCCTCGC CGCCGCCGCCGGCTTAAGGCTCTCCTCCCCGCGCCGTACCGGCGGGAGTGTGGAGGTGTT GTGCTGCGGCGTGGGTGTGTTGGGAGTTGGGGGGTGAAGCATGATGGATGGATCCACCGC TGCGGCGGCGGAGCTGGAGGCGGCGGAGAGGGTGGTGATGAGGTGGGACTCCACGGCGTC GGCGTCCTACGGGGGCGGGGGCGGGGACGAGCAGATGCTGTTCGATGGCGGCGGTGACCG GGTGGAGGCGGAGCGGTTCCTCCGGGCTGTGGATGACCTACGGCGGCTGGCGCCGCCGTC CCCGGCCACGGTCGGGAGCCCGCGCCGCACCTCGTCGGCTAGCGGCGGCGGAGGGGCGGC GTCCAACGCCGTCCAGGTCGCGATGGCGCGGCTGGAGGACGAGTTCCGCCACGTGCTGTC GTCGCGCGCCCTCGACCTGGAGATCGAGGCGCTCGCCGACCTCACCTCGCTCTCCATGTG CAGCGAACGGACCAACTCCGCGGACGTCGCCGAGGAAGCGGCGGCTGCGGACGAAGACGA CTCCGTGTCGTCCTCCGTCGGCCGCCGCAGCAGCTACCGCTCGCTGCGCAGCATCCGAGA AATCGATCTCCTCCCCGCGGACGCCATCTCCGACCTCCACGCCATCGCCTCCCGCATAGC CGTCGCCGGCTACGGCCGCGAGTGCGTCCAGGTGTACGCCTCCGTCCGCAAGCCGGCCGT CGACTCCGCGCTCCGCCGCCTCGGCGTTGAGAAGCTCAGCATCGGCGACGTGCAGCGGCT CGAGTGGGAAGTCCTCGAGGCCAAGATCCGCCGCTGGATCCGTGCTGCCCGCGCCGCCGT CCGCGGCGTCTTCGCCAGCGAGCGTCGACTCTGCTTCCTCATCTTCCACGACCTTCCCCT CTCCAGCTCTACCATCACCACTGCCACCCACGACGCTCCCTTCGCGGAAGCCGTCAAGGG CGCCGCCCTGCAGCTCTTCGGCTTCGCCGAGGCGATCAGCATCGGCCGCCGCTCACCGGA GAAGCTGTTCAAGATCATTGACCTGCACGACGCGATCGCCGATCTGTTGCCTGACGTCTC CGACATCTTTGCTGCATCCAAGGCCGGGGAATCCATATACGTGCAGGCTGCCGAGATCAG GTCGCGTCTCGCTGATGCCGTGCGTGGTATACTGTCGGAATTTGAGAACACTGTGCTTCG TGACCCGTCGAAGACTCCGGTGCCTGGTGGTACCATCCATCCTCTCACTCGCTATGTCAT GAATTACAGTAGCCTCATTTCTGACTACAAAACCACACTGTCTGAGCTGATTGTGTCGCG GCCATTGGCTTGCTCCCGAATTGCTCCTGAGGGCAATGAGAATGCCCCATCCTTCCCTGA TCTTGACCTTGCCGACCCTGACAGTCAGTTACCCCTTGCTGCTCATCTTATCTGGATTAT TGTGGTTCTTGAGCACAATCTTGAGAGCAAAGCATCACTCTACAAGGATGCGGCACTCTC TCATTTGTTCGTCATGAACAATGTACACTATATTGCACACAAGATAAAGGATTCACCGGA GCTCCGGGGGCTTATTGGTGATGAGTATTTGAAGCAGCTGACAGGTAAGTTCCGGCTCGC AGCCACTCGCTATCAACGGACAGCATGGTTGAAGATCCTGAATTGTCTGAGAGATGAAGG TCTGCATGTCAGTGGGGGCTTTTCATCAGGGGTATCCAAATCAGCACTCCGGGAGCGTTT CAAGTCTTTCAATGCTGCATTCGAGGAGGCACATAGGGTTCAATCTGCTTGGTATGTGCC AGACACGCAGCTGAGAGAAGAGCTTAGGATATCAATAGCAGAGAAACTTCTTCCAGCATA TCGATCCTTCCTTGGTCGGTTCCGGCATCACATAGAGAATGGAAGGCACCCAGAGTTGTA CATCAAATACTCAGTTGAGGACCTTGAGACGTCCGTCACAAATTTCTTTGAGGGTTGTCC ACCTTCGCTACATAACAGGAGAAGATCCCATGGATGAGAGGTGGCTTGAAGACTCAAAAG ATCTCTATTGTTGACTGATGAGTGTGGTTGCCTAGTATTCTACAATGCTTCGGGAAAAGC AAGACTTAAGGGTATAGTTGGTGATGATTTCTTCTACTAGAGGTAATCTGAAACAGGATC AGGATCTTATTGAAACTGTCAAATTCCTTAGTGGTTCTTCCTTTTATAGCCAACCTTGTT CGTTTGTTACACTATCATCATATCTTTTATGATTAGATTGTTCATATAGGTCTGTTCTTT CAGAATGTTTCGCAGTTGTAAGTTGTAACATCATGGTGTTTGTTTGACACTTAACTGAGT GTCTTGTCACCTTTTTTTGGTTGGTCAGATATATATTAAGGATTGCCCTTTCTAGATTAN ATGTGAAACAAAAAAAAAAGAAAACTCGGGGGGGGGGGCCCGGGCCNCAATTGCGGCCTA TAGGGGATGGGTGTTACCCCCGCCTCCCCGGCCCGTCGTGTTGCGGCGGGGTGGGACTGG GAGAAACCTTGGGGGGCCCCCAGCTAGATGGGCTGGGAGCACATTGCCCCTTGGGGCGGG CGGGCGGGTGGTGTAAAAAGCCGCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)