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Oryza sativa
cluster # 1738 cluster # 1738       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1738#0 length = 1266 sequences # 2  

consensusID : consensus_1738#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1266
fasta sequence
                              [CGAGATGCGCTATACTCTTCAAAACAGATTTGCTGAAGCTGAAGTGGAGACTGTAGCAGCTGAGAAGAAGAAGGTTGAAAGGGAAACATTGGCTGAGAAAATGTTGAATGAACAAGAACTCATACTTGATGCTACAAAGGAAAGATCCAAGATGCTGGAACAGCAAGTGCGGGAGAATGCAAAGCTGAGGGAGTTACTAATGGACCGAGGCCAAATTGTGGATGCATTGCAGGGGGAAATGCTGGGAATCTTCGATAAAATTTCACAACTTCAACTCAGGGTTGATAAGCAACTTCCTGAACCCCTGCTATCAAGCATGTCCTCCTCAGTCAACTCAGCTGATAACATTGCACAGCTCCAGTGCAGAGTTGATGACCCACAGCATTCTGTTGATGATTCATTGCAACTAGCTTCACCTAGATTGTCCAGCTCATTCAAATCAACAGATAGCACTGCGCAAGCCCATTGTAGAGTTGATGAGCCACAAATTTCTGTTGATGAATCGCTGCTTCCTGTTGACGAGTGTGAGCAGCTGAAACTGATTTTACCAAGGTTATCTAGCTCAGTCATGTCTGCACAATCCCAATATAGAGTTGATGAACCGCTACTTCCTGTTGATGAGGTGTTGCAACTAGCTTCATCAAGCTTATCCAGTTCGCTCAAATCAGGAGATAACATCGCTCAACTTTTGGGAGTACTTGATGTGCATTTACCTGTTGATGAGTTACTGCAACTACCTTCATTGATCTTATCTAGCTCAGTGAAATCATCAGACAGCATTGCGCAGTTCCAACAAAAGGCTGATGCTGATGAGATGCTGCAATCATCTAGCTTAGCCAGCTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTTCCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTCAGAGAAACCAGCAACATTCAAGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTTCAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAGCTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAGCCGTATGAATACTACACATATGGTGCTGAATTCGTGAATGGCGTGTTTTATAAGAAGTAAAACCAAATCTAGGATCTTGCTATGAACTTGGTCCTTCTTATTATTTGAATTCGCAAATCTGCTTACCTGTTTAAAAAAAA]

[+] EMBL AK058958             [CGAGATGCGCTATACTCTTCAAAACAGATTTGCTGAAGCTGAAGTGGAGACTGTAGCAGCTGAGAAGAAGAAGGTTGAAAGGGAAACATTGGCTGAGAAAATGTTGAATGAACAAGAACTCATACTTGATGCTACAAAGGAAAGATCCAAGATGCTGGAACAGCAAGTGCGGGAGAATGCAAAGCTGAGGGAGTTACTAATGGACCGAGGCCAAATTGTGGATGCATTGCAGGGGGAAATGCTGGGAATCTTCGATAAAATTTCACAACTTCAACTCAGGGTTGATAAGCAACTTCCTGAACCCCTGCTATCAAGCATGTCCTCCTCAGTCAACTCAGCTGATAACATTGCACAGCTCCAGTGCAGAGTTGATGACCCACAGCATTCTGTTGATGATTCATTGCAACTAGCTTCACCTAGATTGTCCAGCTCATTCAAATCAACAGATAGCACTGCGCAAGCCCATTGTAGAGTTGATGAGCCACAAATTTCTGTTGATGAATCGCTGCTTCCTGTTGACGAGTGTGAGCAGCTGAAACTGATTTTACCAAGGTTATCTAGCTCAGTCATGTCTGCACAATCCCAATATAGAGTTGATGAACCGCTACTTCCTGTTGATGAGGTGTTGCAACTAGCTTCATCAAGCTTATCCAGTTCGCTCAAATCAGGAGATAACATCGCTCAACTTTTGGGAGTACTTGATGTGCATTTACCTGTTGATGAGTTACTGCAACTACCTTCATTGATCTTATCTAGCTCAGTGAAATCATCAGACAGCATTGCGCAGTTCCAACAAAAGGCTGATGCTGATGAGATGCTGCAATCATCTAGCTTAGCCAGCTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTTCCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTCAGAGAAACCAGCAACATTCAAGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTTCAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAGCTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAGCCGTATGAATACTACACATATGGTGCTGAATTCGTGAATGGCGTGTTTTATAAGAAGTAAAACCAAATCTAGGATCTTGCTATGAACTTGGTCCTTCTTATTATTTGAATTCGC                          ]
[+] EMBL CA753091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGCTTAGCCAGCTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTTCCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTCAGGGAAACCAGCAACATTCATGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTTCAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAGCTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAGCCGTATGAATACTACACATATGGTGCTGAATTCGTGAATGGCGTGTTTTATAAGAAGTAAAACCAAATCTAGGATCTTGCTATGAACTTGGTCCTTCTTATTATTTGAATTCGCAAATCTGCTTACCTGTTTAAAAAAAA]


>consensus_1738#0 CGAGATGCGCTATACTCTTCAAAACAGATTTGCTGAAGCTGAAGTGGAGACTGTAGCAGC TGAGAAGAAGAAGGTTGAAAGGGAAACATTGGCTGAGAAAATGTTGAATGAACAAGAACT CATACTTGATGCTACAAAGGAAAGATCCAAGATGCTGGAACAGCAAGTGCGGGAGAATGC AAAGCTGAGGGAGTTACTAATGGACCGAGGCCAAATTGTGGATGCATTGCAGGGGGAAAT GCTGGGAATCTTCGATAAAATTTCACAACTTCAACTCAGGGTTGATAAGCAACTTCCTGA ACCCCTGCTATCAAGCATGTCCTCCTCAGTCAACTCAGCTGATAACATTGCACAGCTCCA GTGCAGAGTTGATGACCCACAGCATTCTGTTGATGATTCATTGCAACTAGCTTCACCTAG ATTGTCCAGCTCATTCAAATCAACAGATAGCACTGCGCAAGCCCATTGTAGAGTTGATGA GCCACAAATTTCTGTTGATGAATCGCTGCTTCCTGTTGACGAGTGTGAGCAGCTGAAACT GATTTTACCAAGGTTATCTAGCTCAGTCATGTCTGCACAATCCCAATATAGAGTTGATGA ACCGCTACTTCCTGTTGATGAGGTGTTGCAACTAGCTTCATCAAGCTTATCCAGTTCGCT CAAATCAGGAGATAACATCGCTCAACTTTTGGGAGTACTTGATGTGCATTTACCTGTTGA TGAGTTACTGCAACTACCTTCATTGATCTTATCTAGCTCAGTGAAATCATCAGACAGCAT TGCGCAGTTCCAACAAAAGGCTGATGCTGATGAGATGCTGCAATCATCTAGCTTAGCCAG CTCAGAGAAACCAGCAACTTTCAAGAATTGGTCATCTGCTTCAGACACCATTACACAGTT CCAGCAAAGGGCTAATGCTGATGAGTCGCTGCCGCTTCCTTCATCTAGCTTGGCCAGCTC AGAGAAACCAGCAACATTCAAGAGTACTTGGTCATCTGCTGCAGAATCAAATTCAGTTTT CAGTGGTGATGAAGAGATTGATGATGCTTCCTTCCATGACAGTATTGATTTGGATGATAG CTGGGATTTAGTTGACGATGAAGCCATCTATATGTGTGCTAACTAGCCGTATGAATACTA CACATATGGTGCTGAATTCGTGAATGGCGTGTTTTATAAGAAGTAAAACCAAATCTAGGA TCTTGCTATGAACTTGGTCCTTCTTATTATTTGAATTCGCAAATCTGCTTACCTGTTTAA AAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)