cluster # 1789

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Oryza sativa
cluster # 1789 cluster # 1789 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1789#0 length = 1497 sequences # 2
consensusID : consensus_1789#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1497
fasta sequence
                              [AGCTAGTTCGAGCATCCCACGTCGAGTCGCCGAGGCCGCGCGCGTCCTCTCAAGCGGCTAACCCCCGCGCGCGCCGGCGCTTCTCCCCTTCCCGGGCCTCTTCAAAAATCCCCGCGCCGCGTAGCCGATCACTTGTCGCACCAACATGGAGGAGGACGGCGGCAGCGACGCGCGGGTGGTGGAGTCCATGCAGCGGCTGCTCGACGCGGTGCCGCCCGGTGCCGACGACCCGTACACCATCTTCCGCCTCCCCGCGGCCGTGCGGGAGCGGCACCGCGACCTGTACGAGCCAAAGCTCGTGTCCGTGGGGCCGTACTACCACGGCCGCGACGGGCTCGGCGCCGCGCAGCGCCACAAGTGGCGCCTCCTCCGCGACTTCCTGTCGCGGCAGAGCGACGACAAGGCCGGGCTCGGAGCCTACGTGCGCGCCGCGCGGGCGGTCGAGGCCGACGCGCGGCAGTGCTACGCGGAGGGGTTCGACGACGTGGGCGCCGACGAGTTCGCCGAGATGCTGGTGCTCGACGGTTGCTTCCTGCTCGAGTTCTTCCTGAGGAAGAGCGAGGGGCAGCTCGCGGCGCCCGGGGGCGCCAAGTGGGCG-TGGCAGCACATGTACCACGACGTCCTCCTCCTGGAGAATCAGATACCGTTCTTCGTCGTCGAGAGGCTGCACGGCGTCGCCTTTGCCGGGGACGATGATGGCGCCGCCGACCGTGACGCGCTCCTCGACATCTTCTGCAAGGCGTTCGCCGGCGACCTGCCTTCGAGCCGCGTCATACGGCCGCCGAGCGACAAGACCATCCACCACCTGCTGCACCTGCACTACGAGTGCAACGTCCGCAACCCGGCCGCGGACAGCGACAAGGCGCGCAACGGCGGGGACGCCGCCAACGGCGGCGCGTCGTCGCTGGCCATCTGGAAGCAGCCGCCCGTCCCGTCCCCGCGCTCCAGCGACGGCGCCATCAAAGGGCGGATGACGTCGATGATCCCGCCGGCGGCCAAGATGGAGGAGGCCGGCGTGACGTTCAAGCGGAAGGCCACCCCGCGCGACGTGTTCGACATGAGCTTCCGGTACGGCGTGCTGCACATGCCGGCGTTCGTGGTGGACGAGGGCGCCAAGGTGCTCCTCGCGAACCTGGTGGCGTTCGAGCAGGGCGGCGGCCGCGCGGCGCGGAAGCTGGAAGGGGGCAACCTGGCGACGGGGTTCGTGGCGCTGCTGGGTTCGCTGGTGAACTCGCGGCGGGACGTGGAGGTGCTCCGCCGCTGCGGGATCCTGCACTGCATGGTCACCGACGAGGAGGCCGTGGCGTACTTCAGCCACGTGGTGCAGTACACGACCATGGACTACGACCGGCACCTGCTGGCTTGCCTGTTCCGGGACATCCGGGAGCACTGCCACTGGAACCGATGATTTGGGTGTTTCATCCCAATGCTGCTTGGCTGGTTGCTATACGATTGTCTTCATAGATTTCCTTTTACTGAACGATACCTCGATCATAA]

[+] EMBL AK109731             [AGCTAGTTCGAGCATCCCACGTCGAGTCGCCGAGGCCGCGCGCGTCCTCTCAAGCGGCTAACCCCCGCGCGCGCCGGCGCTTCTCCCCTTCCCGGGCCTCTTCAAAAATCCCCGCGCCGCGTAGCCGATCACTTGTCGCACCAACATGGAGGAGGACGGCGGCAGCGACGCGCGGGTGGTGGAGTCCATGCAGCGGCTGCTCGACGCGGTGCCGCCCGGTGCCGACGACCCGTACACCATCTTCCGCCTCCCCGCGGCCGTGCGGGAGCGGCACCGCGACCTGTACGAGCCAAAGCTCGTGTCCGTGGGGCCGTACTACCACGGCCGCGACGGGCTCGGCGCCGCGCAGCGCCACAAGTGGCGCCTCCTCCGCGACTTCCTGTCGCGGCAGAGCGACGACAAGGCCGGGCTCGGAGCCTACGTGCGCGCCGCGCGGGCGGTCGAGGCCGACGCGCGGCAGTGCTACGCGGAGGGGTTCGACGACGTGGGCGCCGACGAGTTCGCCGAGATGCTGGTGCTCGACGGTTGCTTCCTGCTCGAGTTCTTCCTGAGGAAGAGCGAGGGGCAGCTCGCGGCGCCCGGGGGCGCCAAGTGGGCG TGGCAGCACATGTACCACGACGTCCTCCTCCTGGAGAATCAGATACCGTTCTTCGTCGTCGAGAGGCTGCACGGCGTCGCCTTTGCCGGGGACGATGATGGCGCCGCCGACCGTGACGCGCTCCTCGACATCTTCTGCAAGGCGTTCGCCGGCGACCTGCCTTCGAGCCGCGTCATACGGCCGCCGAGCGACAAGACCATCCACCACCTGCTGCACCTGCACTACGAGTGCAACGTCCGCAACCCGGCCGCGGACAGCGACAAGGCGCGCAACGGCGGGGACGCCGCCAACGGCGGCGCGTCGTCGCTGGCCATCTGGAAGCAGCCGCCCGTCCCGTCCCCGCGCTCCAGCGACGGCGCCATCAAAGGGCGGATGACGTCGATGATCCCGCCGGCGGCCAAGATGGAGGAGGCCGGCGTGACGTTCAAGCGGAAGGCCACCCCGCGCGACGTGTTCGACATGAGCTTCCGGTACGGCGTGCTGCACATGCCGGCGTTCGTGGTGGACGAGGGCGCCAAGGTGCTCCTCGCGAACCTGGTGGCGTTCGAGCAGGGCGGCGGCCGCGCGGCGCGGAAGCTGGAAGGGGGCAACCTGGCGACGGGGTTCGTGGCGCTGCTGGGTTCGCTGGTGAACTCGCGGCGGGACGTGGAGGTGCTCCGCCGCTGCGGGATCCTGCACTGCATGGTCACCGACGAGGAGGCCGTGGCGTACTTCAGCCACGTGGTGCAGTACACGACCATGGACTACGACCGGCACCTGCTGGCTTGCCTGTTCCGGGACATCCGGGAGCACTGCCACTGGAACCGATGATTTGGGTGTTTCATCCCAATGCTGCTTGGCTGGTTGCTATACGATTGTCTTCATAGATTTCCTTTTACTGAACGATACCTCGATCATAA]
[+] EMBL CA752707             [                                                                            GCGCTTCTCCCCTTCCCGGGCCTCTTCAAAAATCCCCGCGCCGCGTAGCCGATCACTTGTCGCACCAACATGGAGGAGGACGGCGGCAGCGACGCGCGGGTGGTGGAGTCCATGCAGCGGCTGCTCGACGCGGTGCCGCCCGGTGCCGACGACCCGTACACCATCTTCCGCCTCCCCGCGGCCGTGCGGGAGCGGCACCGCGACCTGTACGAGCCAAAGCTCGTGTCCGTGGGGCCGTACTACCACGGCCGCGACGGGCTCGGCGCCGCGCAGCGCCACAAGTGGCGCCT CTCCGCGACTT CTGTCGCGGCAGAGCGACGACAAGGCCGGGCTCGGAGCCTACGTGCGCGCCGCGCGGGCGGTCGAGGCCGACGCGCGGCAGTGCTACGCGGAGGGGTTCGACAACGTGGGCGCCGAC AGTTCGCCGAGATGCTGGTGCTCGACGGTTGCTT CTGCTCGAGTTCTT CTGAGGAAAAGCGA GGGCAACT GCGG GCCCGGGGGCGCCAAGT GGCGTTGGAAGCACATGTACCACGACGT CTTCTTCTGGAGAAT AAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_1789#0
AGCTAGTTCGAGCATCCCACGTCGAGTCGCCGAGGCCGCGCGCGTCCTCTCAAGCGGCTA
ACCCCCGCGCGCGCCGGCGCTTCTCCCCTTCCCGGGCCTCTTCAAAAATCCCCGCGCCGC
GTAGCCGATCACTTGTCGCACCAACATGGAGGAGGACGGCGGCAGCGACGCGCGGGTGGT
GGAGTCCATGCAGCGGCTGCTCGACGCGGTGCCGCCCGGTGCCGACGACCCGTACACCAT
CTTCCGCCTCCCCGCGGCCGTGCGGGAGCGGCACCGCGACCTGTACGAGCCAAAGCTCGT
GTCCGTGGGGCCGTACTACCACGGCCGCGACGGGCTCGGCGCCGCGCAGCGCCACAAGTG
GCGCCTCCTCCGCGACTTCCTGTCGCGGCAGAGCGACGACAAGGCCGGGCTCGGAGCCTA
CGTGCGCGCCGCGCGGGCGGTCGAGGCCGACGCGCGGCAGTGCTACGCGGAGGGGTTCGA
CGACGTGGGCGCCGACGAGTTCGCCGAGATGCTGGTGCTCGACGGTTGCTTCCTGCTCGA
GTTCTTCCTGAGGAAGAGCGAGGGGCAGCTCGCGGCGCCCGGGGGCGCCAAGTGGGCGTG
GCAGCACATGTACCACGACGTCCTCCTCCTGGAGAATCAGATACCGTTCTTCGTCGTCGA
GAGGCTGCACGGCGTCGCCTTTGCCGGGGACGATGATGGCGCCGCCGACCGTGACGCGCT
CCTCGACATCTTCTGCAAGGCGTTCGCCGGCGACCTGCCTTCGAGCCGCGTCATACGGCC
GCCGAGCGACAAGACCATCCACCACCTGCTGCACCTGCACTACGAGTGCAACGTCCGCAA
CCCGGCCGCGGACAGCGACAAGGCGCGCAACGGCGGGGACGCCGCCAACGGCGGCGCGTC
GTCGCTGGCCATCTGGAAGCAGCCGCCCGTCCCGTCCCCGCGCTCCAGCGACGGCGCCAT
CAAAGGGCGGATGACGTCGATGATCCCGCCGGCGGCCAAGATGGAGGAGGCCGGCGTGAC
GTTCAAGCGGAAGGCCACCCCGCGCGACGTGTTCGACATGAGCTTCCGGTACGGCGTGCT
GCACATGCCGGCGTTCGTGGTGGACGAGGGCGCCAAGGTGCTCCTCGCGAACCTGGTGGC
GTTCGAGCAGGGCGGCGGCCGCGCGGCGCGGAAGCTGGAAGGGGGCAACCTGGCGACGGG
GTTCGTGGCGCTGCTGGGTTCGCTGGTGAACTCGCGGCGGGACGTGGAGGTGCTCCGCCG
CTGCGGGATCCTGCACTGCATGGTCACCGACGAGGAGGCCGTGGCGTACTTCAGCCACGT
GGTGCAGTACACGACCATGGACTACGACCGGCACCTGCTGGCTTGCCTGTTCCGGGACAT
CCGGGAGCACTGCCACTGGAACCGATGATTTGGGTGTTTCATCCCAATGCTGCTTGGCTG
GTTGCTATACGATTGTCTTCATAGATTTCCTTTTACTGAACGATACCTCGATCATAA
clustalw multiple alignements is not computed in this case