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Oryza sativa
cluster # 179 cluster # 179       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_179#0 length = 2206 sequences # 1  
consensus_179#1 length = 898 sequences # 1  

consensusID : consensus_179#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2206
fasta sequence
                              [TCCGTTCGCATCTGGCGCACTGCCGCGATGTCATCGCTAAGTCCTGATGCCGTGTCGCCGTCGCTACCTAGAACTGAGAAACTGGTGCTGGCTGTGACCCATCATTGGCCGGCCTGCCTGCCGGAGTCCTTGTCGGCTGCAACGCCTGACGGCCTGATCGTCTACTCTAATCAGCAATCAGGATAGCCCTGGTTCTGGAGAAGAGTAGACGGTGCGGTGGAGAGAAGGAGGAAGAGAAAAAAGTTATGGTCTATACCTGTAATTTGGAGGGATGTCGTCCTCGTTTCTGTAGTAGTTGTAGAAGTGAGCATGCTTAAAAACCAGAAAAAAGAACGCAGCAATGCTATCATTCGCCTGTTGCACTCGCAATCGAACGTTCCAAAAAGAAAAAAAAAATCCTGATTGCGACGGGGAGTTTAGTAGTAGGTGAGACGCATGTTGCACTGCCTTGGCGGCCCAGTCTCAAGTAGTGGAGTTGTAACATTTGGCCCAGTCTCGGCTAGGCCCATGCTGTCCTCCGGCCGACGAAAGCAACCCCACTGGGATAGGGTTTCCTTTCATCACGTCTTTGATACGTAAATCCGAATCCAGTCGAGGGAAGAAGATGGTGACGCCGGACAAGAAGAGGAGGAAGAAACTCGCGGAGCCGGAGCCGACGCCGACGCCGGCGCCGGAGCCGGTACCTCGTCTCCTCCGCGTTCGTCCAGGGAACAAGAAGAAGAACAAGGGGGCCTCACCTGAGAAGCAGCCGCCGGTGTACATGGTGTTGGCGCACGGAGTCGAGGAAGAGCCCACCACCCACTCCGTAATCGAGGTCGCCGCCTGCGCCGCCGCCCGCCGCCTGCTTAACACCGGCAGCGGCCGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGGGACACGCACCGTGGGCGTCGGCGTGGAGTTGACCACCGTCTACGACCCCGAGACATCCACGGAGCGCGGCGGCCCGCGACTCATCTTCCCCAAGGTGAACCCCGTCCTCATCTCGATCTCTGACGACGGCGGCGGTGTAGTCGGCGGCGGCACGCTCTACGCTCTCTCCCGCACCCCGGCCGTCGTGAGGCCGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACACCGTGTGGCGCGAACTCCCATCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTTCCTCGACCCGCCCAAGTTGCGCGTCGCGGCGTACGCCCTCGTCGGCTCCCACATCCTCCTGTCGGTCTCGGTGCAGCAGCTGCAGCCGCAGCAGCAGCAAGAAGACAAGGGCACCTGCGCCTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACAGCAACCTGCCTTTCGACGGCCAGGCCTTGCCTCTCGGCAGCGACGACGACCACCGCTTCGTCGCCGTCGCCTCCGCCGCCGCCGACGTTACGGTGTACCGCATGGTGGTCGGGATCTCGGCCGTCACGGGGAAGAAGGAGCTGACCATCGTTGCGTTGCGGGTGGTGGTGGCATCCAACTCCAAGTGCCGCATTGTTCCGGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCCGGTCCATTGCTGCTGCTTCCATGGGAAAGGTGGGCAGAGCACGTATTGTTCATCGCACTTACTCTCTGGTGGATGATGGTGAGGACGATTGGGTCGTCATGGTGAAGAAGCAGGATCGGCAGGTTTACAAGCTACGTGATCCATCCTTCTTGGGCGGTTGCTCTTTTTTCCATGTAAAAATTTCAGAGCCTTTCTTTGCTTCTTCCAACATCTTCTGATTCGTTGTCAGCGTCTATTATATCGCTGCTAAGGCCTTGTTTAGTTGGGAAAAAATTTTGGGTTTGGTTGTCACATCAGATATACCGACACACATTTAAGTATTAAACGTAGTCTAATAACAAAACAAATTACAGATTTCGCAGAGATGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATATTTACTGTAACACCATTGTCAAATCATGGTGCAATTAGGCTTAAAAGATTCGTCTAGCAATTTACACGCAATCTGTGTAATTGTTTCTTTTCCATACATTAAATGCTCCATGCATGTGTCCAAATATTCGATGTGACAGTGTAAAAAATTTTGTTTTGGAAACTAAACAGGGCCTAATTCATCAGCAGC]

[+] EMBL AK107289             [TCCGTTCGCATCTGGCGCACTGCCGCGATGTCATCGCTAAGTCCTGATGCCGTGTCGCCGTCGCTACCTAGAACTGAGAAACTGGTGCTGGCTGTGACCCATCATTGGCCGGCCTGCCTGCCGGAGTCCTTGTCGGCTGCAACGCCTGACGGCCTGATCGTCTACTCTAATCAGCAATCAGGATAGCCCTGGTTCTGGAGAAGAGTAGACGGTGCGGTGGAGAGAAGGAGGAAGAGAAAAAAGTTATGGTCTATACCTGTAATTTGGAGGGATGTCGTCCTCGTTTCTGTAGTAGTTGTAGAAGTGAGCATGCTTAAAAACCAGAAAAAAGAACGCAGCAATGCTATCATTCGCCTGTTGCACTCGCAATCGAACGTTCCAAAAAGAAAAAAAAAATCCTGATTGCGACGGGGAGTTTAGTAGTAGGTGAGACGCATGTTGCACTGCCTTGGCGGCCCAGTCTCAAGTAGTGGAGTTGTAACATTTGGCCCAGTCTCGGCTAGGCCCATGCTGTCCTCCGGCCGACGAAAGCAACCCCACTGGGATAGGGTTTCCTTTCATCACGTCTTTGATACGTAAATCCGAATCCAGTCGAGGGAAGAAGATGGTGACGCCGGACAAGAAGAGGAGGAAGAAACTCGCGGAGCCGGAGCCGACGCCGACGCCGGCGCCGGAGCCGGTACCTCGTCTCCTCCGCGTTCGTCCAGGGAACAAGAAGAAGAACAAGGGGGCCTCACCTGAGAAGCAGCCGCCGGTGTACATGGTGTTGGCGCACGGAGTCGAGGAAGAGCCCACCACCCACTCCGTAATCGAGGTCGCCGCCTGCGCCGCCGCCCGCCGCCTGCTTAACACCGGCAGCGGCCGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGGGACACGCACCGTGGGCGTCGGCGTGGAGTTGACCACCGTCTACGACCCCGAGACATCCACGGAGCGCGGCGGCCCGCGACTCATCTTCCCCAAGGTGAACCCCGTCCTCATCTCGATCTCTGACGACGGCGGCGGTGTAGTCGGCGGCGGCACGCTCTACGCTCTCTCCCGCACCCCGGCCGTCGTGAGGCCGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACACCGTGTGGCGCGAACTCCCATCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTTCCTCGACCCGCCCAAGTTGCGCGTCGCGGCGTACGCCCTCGTCGGCTCCCACATCCTCCTGTCGGTCTCGGTGCAGCAGCTGCAGCCGCAGCAGCAGCAAGAAGACAAGGGCACCTGCGCCTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACAGCAACCTGCCTTTCGACGGCCAGGCCTTGCCTCTCGGCAGCGACGACGACCACCGCTTCGTCGCCGTCGCCTCCGCCGCCGCCGACGTTACGGTGTACCGCATGGTGGTCGGGATCTCGGCCGTCACGGGGAAGAAGGAGCTGACCATCGTTGCGTTGCGGGTGGTGGTGGCATCCAACTCCAAGTGCCGCATTGTTCCGGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCCGGTCCATTGCTGCTGCTTCCATGGGAAAGGTGGGCAGAGCACGTATTGTTCATCGCACTTACTCTCTGGTGGATGATGGTGAGGACGATTGGGTCGTCATGGTGAAGAAGCAGGATCGGCAGGTTTACAAGCTACGTGATCCATCCTTCTTGGGCGGTTGCTCTTTTTTCCATGTAAAAATTTCAGAGCCTTTCTTTGCTTCTTCCAACATCTTCTGATTCGTTGTCAGCGTCTATTATATCGCTGCTAAGGCCTTGTTTAGTTGGGAAAAAATTTTGGGTTTGGTTGTCACATCAGATATACCGACACACATTTAAGTATTAAACGTAGTCTAATAACAAAACAAATTACAGATTTCGCAGAGATGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATATTTACTGTAACACCATTGTCAAATCATGGTGCAATTAGGCTTAAAAGATTCGTCTAGCAATTTACACGCAATCTGTGTAATTGTTTCTTTTCCATACATTAAATGCTCCATGCATGTGTCCAAATATTCGATGTGACAGTGTAAAAAATTTTGTTTTGGAAACTAAACAGGGCCTAATTCATCAGCAGC]


>consensus_179#0 TCCGTTCGCATCTGGCGCACTGCCGCGATGTCATCGCTAAGTCCTGATGCCGTGTCGCCG TCGCTACCTAGAACTGAGAAACTGGTGCTGGCTGTGACCCATCATTGGCCGGCCTGCCTG CCGGAGTCCTTGTCGGCTGCAACGCCTGACGGCCTGATCGTCTACTCTAATCAGCAATCA GGATAGCCCTGGTTCTGGAGAAGAGTAGACGGTGCGGTGGAGAGAAGGAGGAAGAGAAAA AAGTTATGGTCTATACCTGTAATTTGGAGGGATGTCGTCCTCGTTTCTGTAGTAGTTGTA GAAGTGAGCATGCTTAAAAACCAGAAAAAAGAACGCAGCAATGCTATCATTCGCCTGTTG CACTCGCAATCGAACGTTCCAAAAAGAAAAAAAAAATCCTGATTGCGACGGGGAGTTTAG TAGTAGGTGAGACGCATGTTGCACTGCCTTGGCGGCCCAGTCTCAAGTAGTGGAGTTGTA ACATTTGGCCCAGTCTCGGCTAGGCCCATGCTGTCCTCCGGCCGACGAAAGCAACCCCAC TGGGATAGGGTTTCCTTTCATCACGTCTTTGATACGTAAATCCGAATCCAGTCGAGGGAA GAAGATGGTGACGCCGGACAAGAAGAGGAGGAAGAAACTCGCGGAGCCGGAGCCGACGCC GACGCCGGCGCCGGAGCCGGTACCTCGTCTCCTCCGCGTTCGTCCAGGGAACAAGAAGAA GAACAAGGGGGCCTCACCTGAGAAGCAGCCGCCGGTGTACATGGTGTTGGCGCACGGAGT CGAGGAAGAGCCCACCACCCACTCCGTAATCGAGGTCGCCGCCTGCGCCGCCGCCCGCCG CCTGCTTAACACCGGCAGCGGCCGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGG GACACGCACCGTGGGCGTCGGCGTGGAGTTGACCACCGTCTACGACCCCGAGACATCCAC GGAGCGCGGCGGCCCGCGACTCATCTTCCCCAAGGTGAACCCCGTCCTCATCTCGATCTC TGACGACGGCGGCGGTGTAGTCGGCGGCGGCACGCTCTACGCTCTCTCCCGCACCCCGGC CGTCGTGAGGCCGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACAC CGTGTGGCGCGAACTCCCATCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTT CCTCGACCCGCCCAAGTTGCGCGTCGCGGCGTACGCCCTCGTCGGCTCCCACATCCTCCT GTCGGTCTCGGTGCAGCAGCTGCAGCCGCAGCAGCAGCAAGAAGACAAGGGCACCTGCGC CTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACAGCAACCTGCCTTTCGACGG CCAGGCCTTGCCTCTCGGCAGCGACGACGACCACCGCTTCGTCGCCGTCGCCTCCGCCGC CGCCGACGTTACGGTGTACCGCATGGTGGTCGGGATCTCGGCCGTCACGGGGAAGAAGGA GCTGACCATCGTTGCGTTGCGGGTGGTGGTGGCATCCAACTCCAAGTGCCGCATTGTTCC GGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCCGGTCCAT TGCTGCTGCTTCCATGGGAAAGGTGGGCAGAGCACGTATTGTTCATCGCACTTACTCTCT GGTGGATGATGGTGAGGACGATTGGGTCGTCATGGTGAAGAAGCAGGATCGGCAGGTTTA CAAGCTACGTGATCCATCCTTCTTGGGCGGTTGCTCTTTTTTCCATGTAAAAATTTCAGA GCCTTTCTTTGCTTCTTCCAACATCTTCTGATTCGTTGTCAGCGTCTATTATATCGCTGC TAAGGCCTTGTTTAGTTGGGAAAAAATTTTGGGTTTGGTTGTCACATCAGATATACCGAC ACACATTTAAGTATTAAACGTAGTCTAATAACAAAACAAATTACAGATTTCGCAGAGATG AATTTATTAAGCCTAATTAATCCGTCATTAGCAAATATTTACTGTAACACCATTGTCAAA TCATGGTGCAATTAGGCTTAAAAGATTCGTCTAGCAATTTACACGCAATCTGTGTAATTG TTTCTTTTCCATACATTAAATGCTCCATGCATGTGTCCAAATATTCGATGTGACAGTGTA AAAAATTTTGTTTTGGAAACTAAACAGGGCCTAATTCATCAGCAGC



consensusID : consensus_179#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 898
fasta sequence
                              [GTATCTTATTAGGATAGAAAAACCCGTAGGATTTTAACCATATCCTAACTAACCGGCATTAGCCGATAAAATCAACCAACAGACACCGGCAGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGGGACACGCATCGTGGGCGTCGGTGTGGAGTTGACCACCGTCTACGACCCCGAGGCCTCCACGGAGCGCGGCGGCCCGCGACTCGTCTTCCCCAAGTTGAACCCCGTCCTCATCTCGATCTCGGACGACGGCGGCGGCGGCGGTGGCGGCGGCAAGCTCTACGCTCTCTCCCGCACCCCGGCCGTCGTGAGGCAGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACACCGTGTGGCGCCAGCTGCCGTCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTTCCTCGACCCGCCCAAGGTGCGCGTAACGGCGTACGCCCTCGTCGGCTCACACATCCTCCTCTCGGTGTCGGTGCGGCCGCCGCAGCAGCAGCAGCAAGATCACAAGGGCACATGCGCCTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACACCAACCTGCCTTTCGACGGCCAGGCCTTGCCTCTCGGCAGCGACGACCACCGCTTCGTCGCCGCCGCCGCCGACGTTGCGGTGTACCGCATGGTGGTGGGGATCTCGGCCGTCACGGGGAAGAAGGAGCTGACCATCGTTGAGCTGCGGGTGGTGGTGGCATCCAATTGCCGCATTGTTCCGGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCTGATCCATTGCTGCTGCTTCCGTGGGAAAGGTGGGCAAAGCACGTATCGTTCATCGCACTTACTCTTTGGTGGAGAATA]

[-] EMBL AK070991             [GTATCTTATTAGGATAGAAAAACCCGTAGGATTTTAACCATATCCTAACTAACCGGCATTAGCCGATAAAATCAACCAACAGACACCGGCAGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGGGACACGCATCGTGGGCGTCGGTGTGGAGTTGACCACCGTCTACGACCCCGAGGCCTCCACGGAGCGCGGCGGCCCGCGACTCGTCTTCCCCAAGTTGAACCCCGTCCTCATCTCGATCTCGGACGACGGCGGCGGCGGCGGTGGCGGCGGCAAGCTCTACGCTCTCTCCCGCACCCCGGCCGTCGTGAGGCAGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACACCGTGTGGCGCCAGCTGCCGTCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTTCCTCGACCCGCCCAAGGTGCGCGTAACGGCGTACGCCCTCGTCGGCTCACACATCCTCCTCTCGGTGTCGGTGCGGCCGCCGCAGCAGCAGCAGCAAGATCACAAGGGCACATGCGCCTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACACCAACCTGCCTTTCGACGGCCAGGCCTTGCCTCTCGGCAGCGACGACCACCGCTTCGTCGCCGCCGCCGCCGACGTTGCGGTGTACCGCATGGTGGTGGGGATCTCGGCCGTCACGGGGAAGAAGGAGCTGACCATCGTTGAGCTGCGGGTGGTGGTGGCATCCAATTGCCGCATTGTTCCGGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCTGATCCATTGCTGCTGCTTCCGTGGGAAAGGTGGGCAAAGCACGTATCGTTCATCGCACTTACTCTTTGGTGGAGAATA]


>consensus_179#1 GTATCTTATTAGGATAGAAAAACCCGTAGGATTTTAACCATATCCTAACTAACCGGCATT AGCCGATAAAATCAACCAACAGACACCGGCAGCGGCCGCGGCCGCGGCATGTCGTTCGCC GCGGTGGGGACACGCATCGTGGGCGTCGGTGTGGAGTTGACCACCGTCTACGACCCCGAG GCCTCCACGGAGCGCGGCGGCCCGCGACTCGTCTTCCCCAAGTTGAACCCCGTCCTCATC TCGATCTCGGACGACGGCGGCGGCGGCGGTGGCGGCGGCAAGCTCTACGCTCTCTCCCGC ACCCCGGCCGTCGTGAGGCAGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTC AGCCACACCGTGTGGCGCCAGCTGCCGTCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCG CTGGAGTTCCTCGACCCGCCCAAGGTGCGCGTAACGGCGTACGCCCTCGTCGGCTCACAC ATCCTCCTCTCGGTGTCGGTGCGGCCGCCGCAGCAGCAGCAGCAAGATCACAAGGGCACA TGCGCCTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACACCAACCTGCCTTTC GACGGCCAGGCCTTGCCTCTCGGCAGCGACGACCACCGCTTCGTCGCCGCCGCCGCCGAC GTTGCGGTGTACCGCATGGTGGTGGGGATCTCGGCCGTCACGGGGAAGAAGGAGCTGACC ATCGTTGAGCTGCGGGTGGTGGTGGCATCCAATTGCCGCATTGTTCCGGGCAACCTTCTG TGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCTGATCCATTGCTGCTGCTTCC GTGGGAAAGGTGGGCAAAGCACGTATCGTTCATCGCACTTACTCTTTGGTGGAGAATA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_179#0      TCCGTTCGCATCTGGCGCACTGCCGCGATGTCATCGCTAAGTCCTGATGCCGTGTCGCCG 60
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TCGCTACCTAGAACTGAGAAACTGGTGCTGGCTGTGACCCATCATTGGCCGGCCTGCCTG 120
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      CCGGAGTCCTTGTCGGCTGCAACGCCTGACGGCCTGATCGTCTACTCTAATCAGCAATCA 180
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GGATAGCCCTGGTTCTGGAGAAGAGTAGACGGTGCGGTGGAGAGAAGGAGGAAGAGAAAA 240
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      AAGTTATGGTCTATACCTGTAATTTGGAGGGATGTCGTCCTCGTTTCTGTAGTAGTTGTA 300
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GAAGTGAGCATGCTTAAAAACCAGAAAAAAGAACGCAGCAATGCTATCATTCGCCTGTTG 360
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      CACTCGCAATCGAACGTTCCAAAAAGAAAAAAAAAATCCTGATTGCGACGGGGAGTTTAG 420
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TAGTAGGTGAGACGCATGTTGCACTGCCTTGGCGGCCCAGTCTCAAGTAGTGGAGTTGTA 480
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      ACATTTGGCCCAGTCTCGGCTAGGCCCATGCTGTCCTCCGGCCGACGAAAGCAACCCCAC 540
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TGGGATAGGGTTTCCTTTCATCACGTCTTTGATACGTAAATCCGAATCCAGTCGAGGGAA 600
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GAAGATGGTGACGCCGGACAAGAAGAGGAGGAAGAAACTCGCGGAGCCGGAGCCGACGCC 660
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GACGCCGGCGCCGGAGCCGGTACCTCGTCTCCTCCGCGTTCGTCCAGGGAACAAGAAGAA 720
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GAACAAGGGGGCCTCACCTGAGAAGCAGCCGCCGGTGTACATGGTGTTGGCGCACGGAGT 780
consensus_179#1      --------------------------------------GTATCTTATTAGGATAGAAAAA 22
                                                             **  * ** *   *   *  

consensus_179#0      CGAGGAAGAGCCCACCACCCACTCCGTAATCGAGGTCGCCGCCTGCGCCGCCGCCCGCCG 840
consensus_179#1      CCCGTAGGATTTTAAC---CATATCCTAACTAAC----CGGCATTAGCCGATAAAATCAA 75
                     *  * * **    * *   **   * ***   *     * ** *  ****       *  

consensus_179#0      CCTGCTTAACACCGGCAGCGGCCGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGG 900
consensus_179#1      CC-----AACA--GACACCGGCAGCGGCCGCGGCCGCGGCATGTCGTTCGCCGCGGTGGG 128
                     **     ****  * ** **** *************************************

consensus_179#0      GACACGCACCGTGGGCGTCGGCGTGGAGTTGACCACCGTCTACGACCCCGAGACATCCAC 960
consensus_179#1      GACACGCATCGTGGGCGTCGGTGTGGAGTTGACCACCGTCTACGACCCCGAGGCCTCCAC 188
                     ******** ************ ****************************** * *****

consensus_179#0      GGAGCGCGGCGGCCCGCGACTCATCTTCCCCAAGGTGAACCCCGTCCTCATCTCGATCTC 1020
consensus_179#1      GGAGCGCGGCGGCCCGCGACTCGTCTTCCCCAAGTTGAACCCCGTCCTCATCTCGATCTC 248
                     ********************** *********** *************************

consensus_179#0      TGACGACGGCGGCGGTGTAGTCGGCGGCGGCACGCTCTACGCTCTCTCCCGCACCCCGGC 1080
consensus_179#1      GGACGACGGCGGCGGCGGCGGTGGCGGCGGCAAGCTCTACGCTCTCTCCCGCACCCCGGC 308
                      ************** *  *  ********** ***************************

consensus_179#0      CGTCGTGAGGCCGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACAC 1140
consensus_179#1      CGTCGTGAGGCAGCTGGATTTCGAGCCATGGTTCTTCGTCCTCGACGACCTCAGCCACAC 368
                     *********** ************************************************

consensus_179#0      CGTGTGGCGCGAACTCCCATCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTT 1200
consensus_179#1      CGTGTGGCGCCAGCTGCCGTCGCCGCCGCTCTTCCCGTGCCGCCTCAACCCGCTGGAGTT 428
                     ********** * ** ** *****************************************

consensus_179#0      CCTCGACCCGCCCAAGTTGCGCGTCGCGGCGTACGCCCTCGTCGGCTCCCACATCCTCCT 1260
consensus_179#1      CCTCGACCCGCCCAAGGTGCGCGTAACGGCGTACGCCCTCGTCGGCTCACACATCCTCCT 488
                     **************** *******  ********************** ***********

consensus_179#0      GTCGGTCTCGGTGCAGCAGCTGCAGCCGCAGCAGCAGCAAGAAGACAAGGGCACCTGCGC 1320
consensus_179#1      CTCGGTGTCGGTGCGGCCGCCGCAGC---AGCAGCAGCAAGATCACAAGGGCACATGCGC 545
                      ***** ******* ** ** *****   *************  ********** *****

consensus_179#0      CTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACAGCAACCTGCCTTTCGACGG 1380
consensus_179#1      CTTCGACATGGACACCGAGCAGTGGGAGATGGTGCACGACACCAACCTGCCTTTCGACGG 605
                     ***************************************** ******************

consensus_179#0      CCAGGCCTTGCCTCTCGGCAGCGACGACGACCACCGCTTCGTCGCCGTCGCCTCCGCCGC 1440
consensus_179#1      CCAGGCCTTGCCTCTCGGCAGCGACGAC---CACCGCTTCGTCGCCG---------CCGC 653
                     ****************************   ****************         ****

consensus_179#0      CGCCGACGTTACGGTGTACCGCATGGTGGTCGGGATCTCGGCCGTCACGGGGAAGAAGGA 1500
consensus_179#1      CGCCGACGTTGCGGTGTACCGCATGGTGGTGGGGATCTCGGCCGTCACGGGGAAGAAGGA 713
                     ********** ******************* *****************************

consensus_179#0      GCTGACCATCGTTGCGTTGCGGGTGGTGGTGGCATCCAACTCCAAGTGCCGCATTGTTCC 1560
consensus_179#1      GCTGACCATCGTTGAGCTGCGGGTGGTGGTGGCATCCAATT------GCCGCATTGTTCC 767
                     ************** * ********************** *      *************

consensus_179#0      GGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCCGGTCCAT 1620
consensus_179#1      GGGCAACCTTCTGTGCGCCATGGGGAAGGGGAGCTTCGCTTCTTTCGAGTTCTGATCCAT 827
                     **************************************************** * *****

consensus_179#0      TGCTGCTGCTTCCATGGGAAAGGTGGGCAGAGCACGTATTGTTCATCGCACTTACTCTCT 1680
consensus_179#1      TGCTGCTGCTTCCGTGGGAAAGGTGGGCAAAGCACGTATCGTTCATCGCACTTACTCTTT 887
                     ************* *************** ********* ****************** *

consensus_179#0      GGTGGATGATGGTGAGGACGATTGGGTCGTCATGGTGAAGAAGCAGGATCGGCAGGTTTA 1740
consensus_179#1      GGTGGAGAATA------------------------------------------------- 898
                     ******  **                                                  

consensus_179#0      CAAGCTACGTGATCCATCCTTCTTGGGCGGTTGCTCTTTTTTCCATGTAAAAATTTCAGA 1800
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      GCCTTTCTTTGCTTCTTCCAACATCTTCTGATTCGTTGTCAGCGTCTATTATATCGCTGC 1860
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TAAGGCCTTGTTTAGTTGGGAAAAAATTTTGGGTTTGGTTGTCACATCAGATATACCGAC 1920
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      ACACATTTAAGTATTAAACGTAGTCTAATAACAAAACAAATTACAGATTTCGCAGAGATG 1980
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      AATTTATTAAGCCTAATTAATCCGTCATTAGCAAATATTTACTGTAACACCATTGTCAAA 2040
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TCATGGTGCAATTAGGCTTAAAAGATTCGTCTAGCAATTTACACGCAATCTGTGTAATTG 2100
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      TTTCTTTTCCATACATTAAATGCTCCATGCATGTGTCCAAATATTCGATGTGACAGTGTA 2160
consensus_179#1      ------------------------------------------------------------
                                                                                 

consensus_179#0      AAAAATTTTGTTTTGGAAACTAAACAGGGCCTAATTCATCAGCAGC 2206
consensus_179#1      ----------------------------------------------
                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)