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Oryza sativa
cluster # 1796 cluster # 1796       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1796#0 length = 1235 sequences # 2  

consensusID : consensus_1796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1235
fasta sequence
                              [GCTAGTACTAGGCAAGTAGAGTAGCAGCCAAAGCGGACACCGCTACCACCTCCACTACCCACCTTCCTTCCTTCCTGAGGATCTCCGCTTGAAGAGAAGAGAACCCCAACCCTAACCCTAACTCCAATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCGGTGCCCCCCGCCGGCCTCCTCCCCCGCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTCCGGTCCCACCCCGCGCGTGGTGGTGGTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCACCACCACGGCCAATCTCGCCGCCTCCCTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGACGCCGACGCGGGCCTGCGCAATCTGGACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCTCACCGCCGCCGACGTGCTCGCTGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCGCGCTCCATGACCTGCAGCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACCCGCTTTCATCCTCATCGACTGCCCTGCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGCCCCTGCAGAAGAGGCCGTGCTTGTTACTACCCCTGACATTACGGCTCTCCGTGATGCTGACCGTGTTGCAGGGCTATTGGAGTGTGACGGCATCAAAGACATTAAGATTATTGTCAACCGAGTACGCCCAGACCTGGTGAAGGGAGAGGATATGATGTCAGCACTTGATGTTCAAGAAATGCTTGGCTTGCCTTTGCTAGGTGTTGTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAATAGAGGTGTGCCGTTGGTTCTGAACGACCCACCCACACCAGCTGGTCTTGCTCTGGAGCAGGCGACTTGGCGGTTGGTGGAAAGAGATGCAATGACAGCAGTTATGGTAGAGGAGCAGGAGAGGCCCAAGAAGAAAGCTGGGTTCTTTTCATTCTTTGGTGGGTAATTTGCTGTGAGATTAATGAGCTCAGTGTAGGCAGTGTGTACAGATTTGCGTTTTGGAGCTACGATTGTTTTTCCCATTTCTTTTGCTTTGTTATAGTGTAGAATGATTCATCCGTTGTGCTTAAATCCATAGACTGGAGTATTTTGCCTTGTTTGCTCAGTTCATAAGTAATTTACGAAGATATGTTT]

[+] EMBL AK059897             [GCTAGTACTAGGCAAGTAGAGTAGCAGCCAAAGCGGACACCGCTACCACCTCCACTACCCACCTTCCTTCCTTCCTGAGGATCTCCGCTTGAAGAGAAGAGAACCCCAACCCTAACCCTAACTCCAATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCGGTGCCCCCCGCCGGCCTCCTCCCCCGCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTCCGGTCCCACCCCGCGCGTGGTGGTGGTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCACCACCACGGCCAATCTCGCCGCCTCCCTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGACGCCGACGCGGGCCTGCGCAATCTGGACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCTCACCGCCGCCGACGTGCTCGCTGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCGCGCTCCATGACCTGCAGCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACCCGCTTTCATCCTCATCGACTGCCCTGCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGCCCCTGCAGAAGAGGCCGTGCTTGTTACTACCCCTGACATTACGGCTCTCCGTGATGCTGACCGTGTTGCAGGGCTATTGGAGTGTGACGGCATCAAAGACATTAAGATTATTGTCAACCGAGTACGCCCAGACCTGGTGAAGGGAGAGGATATGATGTCAGCACTTGATGTTCAAGAAATGCTTGGCTTGCCTTTGCTAGGTGTTGTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAATAGAGGTGTGCCGTTGGTTCTGAACGACCCACCCACACCAGCTGGTCTTGCTCTGGAGCAGGCGACTTGGCGGTTGGTGGAAAGAGATGCAATGACAGCAGTTATGGTAGAGGAGCAGGAGAGGCCCAAGAAGAAAGCTGGGTTCTTTTCATTCTTTGGTGGGTAATTTGCTGTGAGATTAATGAGCTCAGTGTAGGCAGTGTGTACAGATTTGCGTTTTGGAGCTACGATTGTTTTTCCCATTTCTTTTGCTTTGTTATAGTGTAGAATGATTCATCCGTTGTGCTTAAATCCATAGACTGGAG                                                 ]
[+] EMBL AK105653             [                                                                                                              CCTAACCCTAACTCCAATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCGGTGCCCCCCGCCGGCCTCCTCCCCCGCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTCCGGTCCCACCCCGCGCGTGGTGGTGGTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCACCACCACGGCCAATCTCGCCGCCTCCCTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGACGCCGACGCGGGCCTGCGCAATCTGGACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCTCACCGCCGCCGACGTGCTCGCTGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCGCGCTCCATGACCTGCAGCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGGGTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACCCGCTTTCATCCTCATCGACTGCCCTGCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGCCCCTGCAGAAGAGGCCGTGCTTGTTACTACCCCTGACATTACGGCTCTCCGTGATGCTGACCGTGTTGCAGGGCTATTGGAGTGTGACGGCATCAAAGACATTAAGATTATTGTCAACCGAGTACGCCCAGACCTGGTGAAGGGAGAGGATATGATGTCAGCACTTGATGTTCAAGAAATGCTTGGCTTGCCTTTGCTAGGTGTTGTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAATAGAGGTGTGCCGTTGGTTCTGAACGACCCACCCACACCAGCTGGTCTTGCTCTGGAGCAGGCGACTTGGCGGTTGGTGGAAAGAGATGCAATGACAGCAGTTATGGTAGAGGAGCAGGAGAGGCCCAAGAAGAAAGCTGGGTTCTTTTCATTCTTTGGTGGGTAATTTGCTGTGAGATTAATGAGCTCAGTGTAGGCAGTGTGTACAGATTTGCGTTTTGGAGCTACGATTGTTTTTCCCATTTCTTTTGCTTTGTTATAGTGTAGAATGATTCATCCGTTGTGCTTAAATCCATAGACTGGAGTATTTTGCCTTGTTTGCTCAGTTCATAAGTAATTTACGAAGATATGTTT]


>consensus_1796#0 GCTAGTACTAGGCAAGTAGAGTAGCAGCCAAAGCGGACACCGCTACCACCTCCACTACCC ACCTTCCTTCCTTCCTGAGGATCTCCGCTTGAAGAGAAGAGAACCCCAACCCTAACCCTA ACTCCAATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCGGTGCCCCCCGCCGGCCTCC TCCCCCGCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTCCGGTCCCACCCCGCGCGTG GTGGTGGTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCACCACCACGGCCAATCTCGCC GCCTCCCTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGACGCCGACGCGGGCCTGCGC AATCTGGACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCTCACCGCCGCCGACGTGCTC GCTGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCGCGCTCCATGACCTGCAG CTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTC ACCTGGGTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACCCGCTTTCATCCTCATCGAC TGCCCTGCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGCCCCTGCAGAAGAGGCCGTG CTTGTTACTACCCCTGACATTACGGCTCTCCGTGATGCTGACCGTGTTGCAGGGCTATTG GAGTGTGACGGCATCAAAGACATTAAGATTATTGTCAACCGAGTACGCCCAGACCTGGTG AAGGGAGAGGATATGATGTCAGCACTTGATGTTCAAGAAATGCTTGGCTTGCCTTTGCTA GGTGTTGTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAATAGAGGTGTGCCGTTGGTT CTGAACGACCCACCCACACCAGCTGGTCTTGCTCTGGAGCAGGCGACTTGGCGGTTGGTG GAAAGAGATGCAATGACAGCAGTTATGGTAGAGGAGCAGGAGAGGCCCAAGAAGAAAGCT GGGTTCTTTTCATTCTTTGGTGGGTAATTTGCTGTGAGATTAATGAGCTCAGTGTAGGCA GTGTGTACAGATTTGCGTTTTGGAGCTACGATTGTTTTTCCCATTTCTTTTGCTTTGTTA TAGTGTAGAATGATTCATCCGTTGTGCTTAAATCCATAGACTGGAGTATTTTGCCTTGTT TGCTCAGTTCATAAGTAATTTACGAAGATATGTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)