cluster # 1810

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Oryza sativa
cluster # 1810 cluster # 1810 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1810#0 length = 2334 sequences # 2
consensusID : consensus_1810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2334
fasta sequence
                              [CTCGTCCTCCTCCCCGTCTCCCCGAGTTGCCGAGCTCGTCTCGTCCATAGAAACGCAGCGAATTCTCGCCGGATTTCTCCTCCTCCTCCGTGTTCCAATCTGCTCTGCTTTCTCGGCTCGTGCTGGATTACCAGTAGCAATCACTGTTTCGGCAGGTGGGGGGGATCGTCGGCGTACACCAATCCGCCGTGGTTGGAGGTGGTGGTGGTGCAGCAATGGTGGAGGTGGGGGGAAGGGTGAGGGGGTTCGTGCGGAACAGGTGGCTGGTGTTCGTGGCGGCGATGTGGATGCAGTCGTTCGCCGGGGTGGGGTACCTGTTCGGGAGCATCTCGCCGGTGATCAAGGCCTCGCTGGGGTACAACCAGCGGGAGGTGGCGGGGCTCGGGGTCGCCAAGGACCTGGGCGACAGCGTCGGCTTCCTCGCCGGCACGCTCTCCGCCGTGCTCCCGCTCTGGGCCGCGGTCCTCGTCGGCGCCGCGCAGAACCTCTTCGGCTACGGCTGGGTCTGGCTCGCCGTCACCCACCGCGCCCCCGTGCCCCCGCTCTGGGCGATGTGCATTCTTATCTTTATTGGTACTAATGGTGAGACATACTTCAATACGGCTGCTCTCGTCTCATGTGTTCAGAACTTCCCCAAGAGCCGTGGACCGATTGTCGGTATCCTCAAGGGATTTGCTGGTTTGAGTGGTGCAATCCTAACGCAGATGTATGCGATGATACATTCACCTGATCATGCGGCATTGATCTTCATGGTTGCTGTTGGTCCAACAATGGTGGTTATTGCGCTAATGTTCATTGTCAGACCAGTTGGAGGACACAGGCAAGTGCGGCCTTCTGATGGTACAAGTTTCACGTTTGTATACAGTGTCTGCTTGCTTTTGGCTGCTTATCTGATGGGTGTGATGATACTGGGGGACCTTGTCGACTTGAGCCACACAGTGATGGTCTTGTTGACCATCATTCTAATCGTCCTCTTGATAGTTCCAATAGTCATCCCTGTGATACTCAGCTTCTTCTCAGATAACGATGAGAGTGCCTATGCATCACTGTTGCAATCACCAGGGAAAGAAGAAGCAAGTGCGTCAACACCATCTGAAGAGCAAACTGAGGTTATATTCAGTGAGGTGGAGGATGAAAAGCCAAAGGAAGTGGATCTACTTCCAGCCTCAGAGAGGCAGAAGAGGATAGCTGAATTGCAGACAAAGCTATTCCAGGCAGCTGCTGTTGGCGCTGTCAGGGTCAAGAGGAGAAAAGGTCCACGAAGAGGAGAGGATTTCACATTGATGCAGGCATTGATCAAGGCAGATTTTTGGCTACTATTCTTCTCCCTTCTGTTGGGATCAGGATCAGGTCTTACTGTGATAGATAATCTTGGGCAAATGAGCCAGTCATTGGGTTATGAGGATAGTCACATTTTTGTCTCGATGATTAGCATCTGGAACTTCCTTGGACGCATTGGTGGGGGCTACTTTTCAGAGCTTATTGTCAAGGACTATGCATATCCAAGGGCTATTGCGTTAGCGACAGCTCAAGTATTTATGGCATTTGGGCACTTCTCCTTTGCAATGGCTTGGCCGGGTGCAATGTACATCGGCACACTGCTTGTTGGTCTTGGCTATGGTGCCCACTGGGCAATTGTGCCAGCTGCAGCCTCCGAACTCTTCGGCCTGAAGAACTTCGGAGCATTGTACAACTTCCTTACCGTCGCGAATCCAGCAGGCTCCCTTGTATTCTCAGGCATTATTGCCAGTGGCATATACGACTCTGAAGCTGAGAAGCAGGCTCACCAGCACCATAACTCGACATTGCTGGCAATGCCTGGGAGATTGCTTGCCATGGCCTCGGATGCTACTCAGCCATTGAAGTGTGAGGGGGCCATCTGCTTCTTCCTTTCGTCTCTGATCATGTCTGGGTTCTGCATTGTTGCTGCTGTCCTGAGCTTGATCCTCATCTACCGGACGAAGATTGTGTACGCCAATCTGTATGGGAACCCCAGGACATGAAGAATATCATCAGTCAAGACCCAGAAGGAAACAAAATTTATAAATGTTATCAACGCATATACTACTATCTCGGATTTTCACCCCAAGTCCTGTTGATTCGTTGGAGAGCAGAAGGGTGAAGTTTTGTTATCTTCCTTCTGTTTCTGAGAGGCATTCTTGCGCTATCATAAGTTAATGAAGTTATCAGTGGCTACTGAAAGAACGATCGTTGTTCAGTATCTTGAAGTATCGACGTGTACCGGTGCACGGTGGAGATGTGTTTTGCTTTTCAACTTTTGCTGTGTAAAAACTTTAAAAATCGCATGTATACATGTACAAATAGCGTTGCTTG]

[+] EMBL AK101608             [CTCGTCCTCCTCCCCGTCTCCCCGAGTTGCCGAGCTCGTCTCGTCCATAGAAACGCAGCGAATTCTCGCCGGATTTCTCCTCCTCCTCCGTGTTCCAATCTGCTCTGCTTTCTCGGCTCGTGCTGGATTACCAGTAGCAATCACTGTTTCGGCAGGTGGGGGGGATCGTCGGCGTACACCAATCCGCCGTGGTTGGAGGTGGTGGTGGTGCAGCAATGGTGGAGGTGGGGGGAAGGGTGAGGGGGTTCGTGCGGAACAGGTGGCTGGTGTTCGTGGCGGCGATGTGGATGCAGTCGTTCGCCGGGGTGGGGTACCTGTTCGGGAGCATCTCGCCGGTGATCAAGGCCTCGCTGGGGTACAACCAGCGGGAGGTGGCGGGGCTCGGGGTCGCCAAGGACCTGGGCGACAGCGTCGGCTTCCTCGCCGGCACGCTCTCCGCCGTGCTCCCGCTCTGGGCCGCGGTCCTCGTCGGCGCCGCGCAGAACCTCTTCGGCTACGGCTGGGTCTGGCTCGCCGTCACCCACCGCGCCCCCGTGCCCCCGCTCTGGGCGATGTGCATTCTTATCTTTATTGGTACTAATGGTGAGACATACTTCAATACGGCTGCTCTCGTCTCATGTGTTCAGAACTTCCCCAAGAGCCGTGGACCGATTGTCGGTATCCTCAAGGGATTTGCTGGTTTGAGTGGTGCAATCCTAACGCAGATGTATGCGATGATACATTCACCTGATCATGCGGCATTGATCTTCATGGTTGCTGTTGGTCCAACAATGGTGGTTATTGCGCTAATGTTCATTGTCAGACCAGTTGGAGGACACAGGCAAGTGCGGCCTTCTGATGGTACAAGTTTCACGTTTGTATACAGTGTCTGCTTGCTTTTGGCTGCTTATCTGATGGGTGTGATGATACTGGGGGACCTTGTCGACTTGAGCCACACAGTGATGGTCTTGTTGACCATCATTCTAATCGTCCTCTTGATAGTTCCAATAGTCATCCCTGTGATACTCAGCTTCTTCTCAGATAACGATGAGAGTGCCTATGCATCACTGTTGCAATCACCAGGGAAAGAAGAAGCAAGTGCGTCAACACCATCTGAAGAGCAAACTGAGGTTATATTCAGTGAGGTGGAGGATGAAAAGCCAAAGGAAGTGGATCTACTTCCAGCCTCAGAGAGGCAGAAGAGGATAGCTGAATTGCAGACAAAGCTATTCCAGGCAGCTGCTGTTGGCGCTGTCAGGGTCAAGAGGAGAAAAGGTCCACGAAGAGGAGAGGATTTCACATTGATGCAGGCATTGATCAAGGCAGATTTTTGGCTACTATTCTTCTCCCTTCTGTTGGGATCAGGATCAGGTCTTACTGTGATAGATAATCTTGGGCAAATGAGCCAGTCATTGGGTTATGAGGATAGTCACATTTTTGTCTCGATGATTAGCATCTGGAACTTCCTTGGACGCATTGGTGGGGGCTACTTTTCAGAGCTTATTGTCAAGGACTATGCATATCCAAGGGCTATTGCGTTAGCGACAGCTCAAGTATTTATGGCATTTGGGCACTTCTCCTTTGCAATGGCTTGGCCGGGTGCAATGTACATCGGCACACTGCTTGTTGGTCTTGGCTATGGTGCCCACTGGGCAATTGTGCCAGCTGCAGCCTCCGAACTCTTCGGCCTGAAGAACTTCGGAGCATTGTACAACTTCCTTACCGTCGCGAATCCAGCAGGCTCCCTTGTATTCTCAGGCATTATTGCCAGTGGCATATACGACTCTGAAGCTGAGAAGCAGGCTCACCAGCACCATAACTCGACATTGCTGGCAATGCCTGGGAGATTGCTTGCCATGGCCTCGGATGCTACTCAGCCATTGAAGTGTGAGGGGGCCATCTGCTTCTTCCTTTCGTCTCTGATCATGTCTGGGTTCTGCATTGTTGCTGCTGTCCTGAGCTTGATCCTCATCTACCGGACGAAGATTGTGTACGCCAATCTGTATGGGAACCCCAGGACATGAAGAATATCATCAGTCAAGACCCAGAAGGAAACAAAATTTATAAATGTTATCAACGCATATACTACTATCTCGGATTTTCACCCCAAGTCCTGTTGATTCGTTGGAGAGCAGAAGGGTGAAGTTTTGTTATCTTCCTTCTGTTTCTGAGAGGCATTCTTGCGCTATCATAAGTTAATGAAGTTATCAGTGGCTACTGAAAGAACGATCGTTGTTCAGTATCTTGAAGTATCGACGTGTACCGGTGCACGGTGGAGATGTGTTTTGCTTTTCAACTTTTGCTGTGTAAAAACTTTAAAAATCGCATGTATACATGTACAAATAGCGTTGCTTG]
[+] EMBL CA748457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTACCGTCGCGAATCCAGCAGGCTCCCTTGTATTCTCAGGCATTATTGCCAGTGGCATATACGACTCTGAAGCTGAGAAGCAGGCTCACCAGCACCATAACTCGACATTGCTGGCAATGCCTGGGAGATTGCTTGCCATGGCCTCGGATGCTACTCAGCCATTGAAGTGTGAGGGGGCCATCTGCTTCTTCCTTTCGTCTCTGATCATGTCTGGGTTCTGCATTGTTGCTGCTGTCCTGAGCTTGATCCTCATCTACCGGACG                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_1810#0
CTCGTCCTCCTCCCCGTCTCCCCGAGTTGCCGAGCTCGTCTCGTCCATAGAAACGCAGCG
AATTCTCGCCGGATTTCTCCTCCTCCTCCGTGTTCCAATCTGCTCTGCTTTCTCGGCTCG
TGCTGGATTACCAGTAGCAATCACTGTTTCGGCAGGTGGGGGGGATCGTCGGCGTACACC
AATCCGCCGTGGTTGGAGGTGGTGGTGGTGCAGCAATGGTGGAGGTGGGGGGAAGGGTGA
GGGGGTTCGTGCGGAACAGGTGGCTGGTGTTCGTGGCGGCGATGTGGATGCAGTCGTTCG
CCGGGGTGGGGTACCTGTTCGGGAGCATCTCGCCGGTGATCAAGGCCTCGCTGGGGTACA
ACCAGCGGGAGGTGGCGGGGCTCGGGGTCGCCAAGGACCTGGGCGACAGCGTCGGCTTCC
TCGCCGGCACGCTCTCCGCCGTGCTCCCGCTCTGGGCCGCGGTCCTCGTCGGCGCCGCGC
AGAACCTCTTCGGCTACGGCTGGGTCTGGCTCGCCGTCACCCACCGCGCCCCCGTGCCCC
CGCTCTGGGCGATGTGCATTCTTATCTTTATTGGTACTAATGGTGAGACATACTTCAATA
CGGCTGCTCTCGTCTCATGTGTTCAGAACTTCCCCAAGAGCCGTGGACCGATTGTCGGTA
TCCTCAAGGGATTTGCTGGTTTGAGTGGTGCAATCCTAACGCAGATGTATGCGATGATAC
ATTCACCTGATCATGCGGCATTGATCTTCATGGTTGCTGTTGGTCCAACAATGGTGGTTA
TTGCGCTAATGTTCATTGTCAGACCAGTTGGAGGACACAGGCAAGTGCGGCCTTCTGATG
GTACAAGTTTCACGTTTGTATACAGTGTCTGCTTGCTTTTGGCTGCTTATCTGATGGGTG
TGATGATACTGGGGGACCTTGTCGACTTGAGCCACACAGTGATGGTCTTGTTGACCATCA
TTCTAATCGTCCTCTTGATAGTTCCAATAGTCATCCCTGTGATACTCAGCTTCTTCTCAG
ATAACGATGAGAGTGCCTATGCATCACTGTTGCAATCACCAGGGAAAGAAGAAGCAAGTG
CGTCAACACCATCTGAAGAGCAAACTGAGGTTATATTCAGTGAGGTGGAGGATGAAAAGC
CAAAGGAAGTGGATCTACTTCCAGCCTCAGAGAGGCAGAAGAGGATAGCTGAATTGCAGA
CAAAGCTATTCCAGGCAGCTGCTGTTGGCGCTGTCAGGGTCAAGAGGAGAAAAGGTCCAC
GAAGAGGAGAGGATTTCACATTGATGCAGGCATTGATCAAGGCAGATTTTTGGCTACTAT
TCTTCTCCCTTCTGTTGGGATCAGGATCAGGTCTTACTGTGATAGATAATCTTGGGCAAA
TGAGCCAGTCATTGGGTTATGAGGATAGTCACATTTTTGTCTCGATGATTAGCATCTGGA
ACTTCCTTGGACGCATTGGTGGGGGCTACTTTTCAGAGCTTATTGTCAAGGACTATGCAT
ATCCAAGGGCTATTGCGTTAGCGACAGCTCAAGTATTTATGGCATTTGGGCACTTCTCCT
TTGCAATGGCTTGGCCGGGTGCAATGTACATCGGCACACTGCTTGTTGGTCTTGGCTATG
GTGCCCACTGGGCAATTGTGCCAGCTGCAGCCTCCGAACTCTTCGGCCTGAAGAACTTCG
GAGCATTGTACAACTTCCTTACCGTCGCGAATCCAGCAGGCTCCCTTGTATTCTCAGGCA
TTATTGCCAGTGGCATATACGACTCTGAAGCTGAGAAGCAGGCTCACCAGCACCATAACT
CGACATTGCTGGCAATGCCTGGGAGATTGCTTGCCATGGCCTCGGATGCTACTCAGCCAT
TGAAGTGTGAGGGGGCCATCTGCTTCTTCCTTTCGTCTCTGATCATGTCTGGGTTCTGCA
TTGTTGCTGCTGTCCTGAGCTTGATCCTCATCTACCGGACGAAGATTGTGTACGCCAATC
TGTATGGGAACCCCAGGACATGAAGAATATCATCAGTCAAGACCCAGAAGGAAACAAAAT
TTATAAATGTTATCAACGCATATACTACTATCTCGGATTTTCACCCCAAGTCCTGTTGAT
TCGTTGGAGAGCAGAAGGGTGAAGTTTTGTTATCTTCCTTCTGTTTCTGAGAGGCATTCT
TGCGCTATCATAAGTTAATGAAGTTATCAGTGGCTACTGAAAGAACGATCGTTGTTCAGT
ATCTTGAAGTATCGACGTGTACCGGTGCACGGTGGAGATGTGTTTTGCTTTTCAACTTTT
GCTGTGTAAAAACTTTAAAAATCGCATGTATACATGTACAAATAGCGTTGCTTG
clustalw multiple alignements is not computed in this case