cluster # 1814

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Oryza sativa
cluster # 1814 cluster # 1814 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1814#0 length = 1368 sequences # 2
consensusID : consensus_1814#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1368
fasta sequence
                              [CACATCCGTGCTTGCATGCGGCTCAACTCCTCTTGTGTTCCTCCGAGAACCACGCCTCCATCGATCGATCGTCTGCGATCCTTGTCACGGCTTGAACTGTGATCAAGAAACGCCTTTCTGATCGATGCGCGGTTGATTGATCTTGGTGCGGACGGAGGGAGAGAGAGAGATGGTGCAGGAGCACGGCGGGAGTAACCACCTGCAGCAGCAGCATCAGCACCAGCTGGCGAAGTACGGCGGCGGTGTGGCTGGCACCGGCGTGGCGCGGGCGTCGAGGAAGAACAAGCCCAAGAAGGTGCCCCAGCGCGGCCTCGGCGTGGCGCAGCTGGAGAAGCTCCGGATCGAGGAGCAGAAGAAGATGGAGGGTGGCACCGCGTTGTCCTCCCACGGCGCGCTCGGCGGCGGTGATGGCGTCCTCGGCCACCTCCCTCCTCCGCCGCCGCCGTCGCTCGCGTTGAGCGCCCTGCAGTCGAGGTCCGCCGCGGACGGTGGCTTCCCGGCGGCGCTCTGGAGCCCAGTGGATCCCATCAAACACCCGTACAAGAGGAGCCTGTGCCCACAGCCTCCATCCCCGATGGTGAGCACGGGCCTGTCGCTGACGGCGTCGGCGCGCCACCCAACGGAGCCCCCTTCAAACCAAATGTACAGCAGCAGCGGCAGCAGGAGCAGCGCCGCGGCGGCGGAGGAGGAGAGGGAGACGGGCGGCGTGGACAGGTCATGGCCTTTCATGTTCAAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGAGCTCCTCCTCTGGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGGTTGGCCGATGTTGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGTGCCAATGCAAATTGTTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAGAACGGCCGTGCCAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCCTCAAGCAGCCTCATGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGGAAGCAACATTTCATCATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTTGCGAAAGGACCTTGAGCGAGTGCAAGACCGATGTGTCTGAAGGCGTCGACTTAGAACTGAAGCTAGGAAATTGCTGAACTGAACTTGTCCTGTTGCTTTCTGAAAAAAAAAAACTGCAATGAGGTTTACCCAATTACCCTGTTGTGTG-AAAAAAAGTAGAAACTTGTTTAGTCAGTAAGACCAGATGTATAATCAGGTGCTTCTAGAAGATGGTTTNCCTTCCAATAATCATCTGCTG]

[+] EMBL AK120776             [CACATCCGTGCTTGCATGCGGCTCAACTCCTCTTGTGTTCCTCCGAGAACCACGCCTCCATCGATCGATCGTCTGCGATCCTTGTCACGGCTTGAACTGTGATCAAGAAACGCCTTTCTGATCGATGCGCGGTTGATTGATCTTGGTGCGGACGGAGGGAGAGAGAGAGATGGTGCAGGAGCACGGCGGGAGTAACCACCTGCAGCAGCAGCATCAGCACCAGCTGGCGAAGTACGGCGGCGGTGTGGCTGGCACCGGCGTGGCGCGGGCGTCGAGGAAGAACAAGCCCAAGAAGGTGCCCCAGCGCGGCCTCGGCGTGGCGCAGCTGGAGAAGCTCCGGATCGAGGAGCAGAAGAAGATGGAGGGTGGCACCGCGTTGTCCTCCCACGGCGCGCTCGGCGGCGGTGATGGCGTCCTCGGCCACCTCCCTCCTCCGCCGCCGCCGTCGCTCGCGTTGAGCGCCCTGCAGTCGAGGTCCGCCGCGGACGGTGGCTTCCCGGCGGCGCTCTGGAGCCCAGTGGATCCCATCAAACACCCGTACAAGAGGAGCCTGTGCCCACAGCCTCCATCCCCGATGGTGAGCACGGGCCTGTCGCTGACGGCGTCGGCGCGCCACCCAACGGAGCCCCCTTCAAACCAAATGTACAGCAGCAGCGGCAGCAGGAGCAGCGCCGCGGCGGCGGAGGAGGAGAGGGAGACGGGCGGCGTGGACAGGTCATGGCCTTTCATGTTCAAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGAGCTCCTCCTCTGGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGGTTGGCCGATGTTGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGTGCCAATGCAAATTGTTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAGAACGGCCGTGCCAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCCTCAAGCAGCCTCATGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGGAAGCAACATTTCATCATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTTGCGAAAGGACCTTGAGCGAGTGCAAGACCGATGTGTCTGAAGGCGTCGACTTAGAACTGAAGCTAGGAAATTGCTGAACTGAACTTGTCCTGTTGCTTTCTGAAAAAAAAAAACTGCAATGAGGTTTACCCAATTACCCTGTTGTGTG AAAAAAAGTAGAAACTTGTTTAGTCAGTAAGACCAGATGTATAATC                                            ]
[+] EMBL CA764005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gGGGCGGCGTGGACAGGTCATGGCCTTTCATGTTCGAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGAGCTCCTCCTCTGGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGGTTGGCCGATGTTGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGTGCCAATGCAAATTATTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAGAACGGCCGTGCCAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCATCAAGCAGCCTCATGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGGAAGCAACATTTCATCATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTTGCGAAAGGACCTTGAGCGAGTGCAAGACCGATGTGTCTGAAGGCGTCGACTTAGAACTGAAGCTAGGGAATTGCTGAACTGAACTTGTCCTGTTGCTATCTG AAAAAAAAAACTGCAATGAGGTTTACCCAATTACCCTGNTGTGTGAAAAAAAAGTAGAAACTTGNTTAGTCAGTAAGACCAGATGTATAATCAGGTGCTTCTAGAAGATGGTTTNCCTTCCAATAATCATCTGCTG]




>consensus_1814#0
CACATCCGTGCTTGCATGCGGCTCAACTCCTCTTGTGTTCCTCCGAGAACCACGCCTCCA
TCGATCGATCGTCTGCGATCCTTGTCACGGCTTGAACTGTGATCAAGAAACGCCTTTCTG
ATCGATGCGCGGTTGATTGATCTTGGTGCGGACGGAGGGAGAGAGAGAGATGGTGCAGGA
GCACGGCGGGAGTAACCACCTGCAGCAGCAGCATCAGCACCAGCTGGCGAAGTACGGCGG
CGGTGTGGCTGGCACCGGCGTGGCGCGGGCGTCGAGGAAGAACAAGCCCAAGAAGGTGCC
CCAGCGCGGCCTCGGCGTGGCGCAGCTGGAGAAGCTCCGGATCGAGGAGCAGAAGAAGAT
GGAGGGTGGCACCGCGTTGTCCTCCCACGGCGCGCTCGGCGGCGGTGATGGCGTCCTCGG
CCACCTCCCTCCTCCGCCGCCGCCGTCGCTCGCGTTGAGCGCCCTGCAGTCGAGGTCCGC
CGCGGACGGTGGCTTCCCGGCGGCGCTCTGGAGCCCAGTGGATCCCATCAAACACCCGTA
CAAGAGGAGCCTGTGCCCACAGCCTCCATCCCCGATGGTGAGCACGGGCCTGTCGCTGAC
GGCGTCGGCGCGCCACCCAACGGAGCCCCCTTCAAACCAAATGTACAGCAGCAGCGGCAG
CAGGAGCAGCGCCGCGGCGGCGGAGGAGGAGAGGGAGACGGGCGGCGTGGACAGGTCATG
GCCTTTCATGTTCAAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGAGCTCCTCCTCT
GGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGGTTGGCCGATGT
TGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGTGCCAATGCAAA
TTGTTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAGAACGGCCGTGC
CAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCCTCAAGCAGCCTCA
TGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGGAAGCAACATTTCATC
ATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTTGCGAAAGGAC
CTTGAGCGAGTGCAAGACCGATGTGTCTGAAGGCGTCGACTTAGAACTGAAGCTAGGAAA
TTGCTGAACTGAACTTGTCCTGTTGCTTTCTGAAAAAAAAAAACTGCAATGAGGTTTACC
CAATTACCCTGTTGTGTGAAAAAAAGTAGAAACTTGTTTAGTCAGTAAGACCAGATGTAT
AATCAGGTGCTTCTAGAAGATGGTTTNCCTTCCAATAATCATCTGCTG
clustalw multiple alignements is not computed in this case