cluster # 1843

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Oryza sativa
cluster # 1843 cluster # 1843 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1843#0 length = 542 sequences # 2

consensusID : consensus_1843#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 542
fasta sequence

                              [TCTCACATTCTTGGCATTGAGCAACAATGCCTAAGCGGCCACCTCCCGGCCGGCCTCTCCGACCTCCTTGACCTCCAGTACCTGATCATGGAGAACAACCCGATGGGCGTCCCGTTGCCGTCGGAGCTCGGCGACATTGCGCGGCTGCAGGAGCTCCGGCTGGCCAACTCCGGCTACTCGGGGTCGATCCCGGAGACGCTCGGCCGGCTGGCGAGCCTGACGACGCTGTCGCTGGAGAACAACAACCT-CACCGGG-AGGATCCCCGCCGGGCTGAGCCGGCTCAAGCGGATGTACCACCTCAACCTGAGCAAGAACGGGCT-GGACGGCGTCGTGCCGTTCGACGGCGCGTTCCTCAGGCGCCTCGGCCGGAACCTCGACCTCAGCGGCAACCCGGGGCTGTGCGTCGACGGCCGCGCCGTCTTGCAGGCCGACGTCGGCGTCGGCGTCTGCCGCCGCGCCGGCGACGGCGGGGACANCGCCTCCGTGTCCGCCGCCACCGACGTACTATCAGTTGGCACATTGTTCAGGCGAGATGGACAACT]

[+] EMBL C99662               [TCTCACATTCTTGGCATTGAGCAACAATGCCTAAGCGGCCACCTCCCGGCCGGCCTCTCCGACCTCCTTGACCTCCAGTACCTGATCATGGAGAACAACCCGATGGGCGTCCCGTTGCCGTCGGAGCTCGGCGACATTGCGCGGCTGCAGGAGCTCCGGCTGGCCAACTCCGGCTACTCGGGGTCGATCCCGGAGACGCTCGGCCGGCTGGCGAGCCTGACGACGCTGTCGCTGGAGAACAACAACCT CACCGGG AGGATCCCCGCCGGGCTGAGCCGGCTCAAGCGGATGTACCACCTCAACCTGAGCAAGAACGGGCT GGACGGCGTCGTGCCGTTCGACGGCGCGTTCCTCAGGCGCCTCGGCCGGAACCTCGACCTCAGCGGCAACCCGGGGCTGTGCGTCGACGGCCGCGCCGTCTTGCAGGCCGACGTCGGCGTCGGCGTCTGCCGCCGCGCCGGCGACGGCGGGGACANCGCCTCCGTGTCCGCCGCCACCGACGTACTATCAGTTGGCACATTGTTCAGGCGAGATGGACAAC ]
[+] EMBL C99724               [                                                                                                                                                                                                                                         GGAGAACAACAACCTNCACCGGGTAGGATCCCCGCCGGGCTGAGCCGGCTCAAGCGGATGTACCACCTCAACCTGAGCAAGAACGGGCTNCGACGGCGTCGTGCCGTTCGACGGCGCGTTCCTCAGGCGCCTCGGCCGGAACCTCGACCTCAGCGGCAACCCGGGGCTGTGCGTCGACGGCCGCGCCGTCTTGCAGGCCGACGTCGGCGTCGGCGTCTGCCGCCGCGCCGGCGACGGCGGGGACATCGCCTCCGTGTCCGCCGCCACCGACGTACTATCAGTTGGCACATTGTTCAGGCGAGATGGACAACT]




>consensus_1843#0
TCTCACATTCTTGGCATTGAGCAACAATGCCTAAGCGGCCACCTCCCGGCCGGCCTCTCC
GACCTCCTTGACCTCCAGTACCTGATCATGGAGAACAACCCGATGGGCGTCCCGTTGCCG
TCGGAGCTCGGCGACATTGCGCGGCTGCAGGAGCTCCGGCTGGCCAACTCCGGCTACTCG
GGGTCGATCCCGGAGACGCTCGGCCGGCTGGCGAGCCTGACGACGCTGTCGCTGGAGAAC
AACAACCTCACCGGGAGGATCCCCGCCGGGCTGAGCCGGCTCAAGCGGATGTACCACCTC
AACCTGAGCAAGAACGGGCTGGACGGCGTCGTGCCGTTCGACGGCGCGTTCCTCAGGCGC
CTCGGCCGGAACCTCGACCTCAGCGGCAACCCGGGGCTGTGCGTCGACGGCCGCGCCGTC
TTGCAGGCCGACGTCGGCGTCGGCGTCTGCCGCCGCGCCGGCGACGGCGGGGACANCGCC
TCCGTGTCCGCCGCCACCGACGTACTATCAGTTGGCACATTGTTCAGGCGAGATGGACAA
CT

clustalw multiple alignements is not computed in this case