cluster # 1871

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Oryza sativa
cluster # 1871 cluster # 1871 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1871#0 length = 566 sequences # 2

consensusID : consensus_1871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 566
fasta sequence

                              [TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGAACACTGAGCACCTGGCCCCCCTTGTC]

[+] EMBL CA761600             [TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGAACACTGAGCACCTGGCCCCCCTTGTC]
[-] EMBL AK107933             [             AACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCGAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGGGACAACCTGATTGAAGTTTTGGAGAAGATGAACACTGA                   ]




>consensus_1871#0
TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTC
AGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACG
CACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTG
TTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACG
GTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACC
ACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTC
AGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCC
TCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATT
GAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGA
ACACTGAGCACCTGGCCCCCCTTGTC

clustalw multiple alignements is not computed in this case