cluster # 1886

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Oryza sativa
cluster # 1886 cluster # 1886 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1886#0 length = 621 sequences # 2

consensusID : consensus_1886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 621
fasta sequence

                              [GGCCAGATTCCGGCCACCTACGCAAACTGCACGACGCTGGTGAGGTTCAGGGTGAGCAAGAACTCCATGTCCGGCGACGTCCCCGACGGGTTGTGGGCGCTCCCCAACGTCGACATCATTGACCTCGCCAACAACCAGTTCACCGGGGGGATCGGCGACGGCATCGGGAGAGCCGCCTTGCTGAGCAGCCTCGACCTGGCCGGGAACAGGTTCTCCGGCGCGATCCCGNCGTCGATCGGCGACGNCAGCAACCTCGAGACAATTGACATTTCGTCGAACGGGTTGTCGGGCAAAATTCCGGCGAGCATCGGGAGGCTGGCACGTCTCGGCAGCTTGAACATTGCTAGGAATGGGATCACCGGGGCCATNNCGGCGAGCATCGCCGAGTGNTCGTCGNTTAGTACGGTCAATTTCACCGGGAACAAGCTCGCCGGCGCGATCCCGTCGGAGCTGGGGACCCTGCCGCGGCTTAATTCTTTGGACTTGTCCGGGAATGACCTCTCCGGTGCCGTGCCGGCGAGCCTCGCCGCTCTGAAGCTGAGCTCCCTGAACATGTCCGACAACAAGCTCGTCCGGCCCGTGCCGGAGCCGCTCTCCATCGCCGCCTACCGCGAGAGCTTA]

[+] EMBL OSS11172A            [GGCCAGATTCCGGCCACCTACGCAAACTGCACGACGCTGGTGAGGTTCAGGGTGAGCAAGAACTCCATGTCCGGCGACGTCCCCGACGGGTTGTGGGCGCTCCCCAACGTCGACATCATTGACCTCGCCAACAACCAGTTCACCGGGGGGATCGGCGACGGCATCGGGAGAGCCGCCTTGCTGAGCAGCCTCGACCTGGCCGGGAACAGGTTCTCCGGCGCGATCCCGNCGTCGATCGGCGACGNCAGCAACCTCGAGACAATTGACATTTCGTCGAACGGGTTGTCGGGCAAAATTCCGGCGAGCATCGGGAGGCTGGCACGTCTCGGCAGCTTGAACATTGCTAGGAATGGGATCACCGGGGCCATNNCGGCGAGCATCGCCGAGTGNTCGTCGNTTAGTACGGTCAATTTCACCGGGAACAAGCTCG                                                                                                                                                                                               ]
[+] EMBL CB639581             [                                                                                                                                                                               CCTTGCTGAGCAGCCTCGACCTGGCCGGGAACAGGTTCTCCGGCGCGATCCCGCCGTCGATCGGCGACGCCAGTAACCTCGAGACAATTGACATTTCGTCGAACGGGTTGTCGGGCAAAATTCCGGCGAGCATCGGGAGGCTGGCACGTCTCGGCAGCTTGAACATTGCTAGGAATGGGATCACCGGGGCCATCCCGGCGAGCATCGGCGAGTGCTCGTCGCTTAGTACGGTCAATTTCACCGGGAACAAGCTCGCCGGCGCGATCCCGTCGGAGCTGGGGACCCTGCCGCGGCTTAATTCTTTGGACTTGTCCGGGAATGACCTCTCCGGTGCCGTGCCGGCGAGCCTCGCCGCTCTGAAGCTGAGCTCCCTGAACATGTCCGACAACAAGCTCGTCCGGCCCGTGCCGGAGCCGCTCTCCATCGCCGCCTACCGCGAGAGCTTA]




>consensus_1886#0
GGCCAGATTCCGGCCACCTACGCAAACTGCACGACGCTGGTGAGGTTCAGGGTGAGCAAG
AACTCCATGTCCGGCGACGTCCCCGACGGGTTGTGGGCGCTCCCCAACGTCGACATCATT
GACCTCGCCAACAACCAGTTCACCGGGGGGATCGGCGACGGCATCGGGAGAGCCGCCTTG
CTGAGCAGCCTCGACCTGGCCGGGAACAGGTTCTCCGGCGCGATCCCGNCGTCGATCGGC
GACGNCAGCAACCTCGAGACAATTGACATTTCGTCGAACGGGTTGTCGGGCAAAATTCCG
GCGAGCATCGGGAGGCTGGCACGTCTCGGCAGCTTGAACATTGCTAGGAATGGGATCACC
GGGGCCATNNCGGCGAGCATCGCCGAGTGNTCGTCGNTTAGTACGGTCAATTTCACCGGG
AACAAGCTCGCCGGCGCGATCCCGTCGGAGCTGGGGACCCTGCCGCGGCTTAATTCTTTG
GACTTGTCCGGGAATGACCTCTCCGGTGCCGTGCCGGCGAGCCTCGCCGCTCTGAAGCTG
AGCTCCCTGAACATGTCCGACAACAAGCTCGTCCGGCCCGTGCCGGAGCCGCTCTCCATC
GCCGCCTACCGCGAGAGCTTA

clustalw multiple alignements is not computed in this case